prot_S-ischiensis_contig9.20819.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20819.1
Unique Nameprot_S-ischiensis_contig9.20819.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length183
Homology
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BLAST of mRNA_S-ischiensis_contig9.20819.1 vs. uniprot
Match: D7FQY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY2_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 3.460e-23
Identity = 56/138 (40.58%), Postives = 81/138 (58.70%), Query Frame = 0 
Query:   53 LQELYDRLSADVTGVFDVLGEVLPLVEAVEAEDFKQRAAWGRAWTPMRATVAEVPDT-------FTISVLILPRGTRLGWYRNSGGETLSKQLFGNVQVSALELQANERGRDLLPSELKVMFGDAFADGGSADSDCVC 183
            LQ L + L AD   + D L  V  L+  V+++ F Q + W R+WT MR  VA+  +T        ++SVL+LPRGT+L W+R     + S+QLFGN+ +   ELQ ++  R L   EL+  + D +A GGS +SDCVC
Sbjct:   14 LQRLAEALRAD-PNLAD-LHNVEELMTEVDSDAFPQASVWERSWTSMRCVVADTAETPPSLSTCISMSVLVLPRGTKLEWHRYHEARSFSRQLFGNLSICDAELQGSDNARKLEQQELEATYADGWAVGGSEESDCVC 149
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQY2_ECTSI3.460e-2340.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.656

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3515987..3517755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20819.1mRNA_S-ischiensis_contig9.20819.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 3515959..3517755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20819.1 ID=prot_S-ischiensis_contig9.20819.1|Name=mRNA_S-ischiensis_contig9.20819.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=183bp
MRAIHATLAACCGTGLAMAWVAPPRVVCASKFRRQPPTDAARAAASDTTV
QPLQELYDRLSADVTGVFDVLGEVLPLVEAVEAEDFKQRAAWGRAWTPMR
ATVAEVPDTFTISVLILPRGTRLGWYRNSGGETLSKQLFGNVQVSALELQ
ANERGRDLLPSELKVMFGDAFADGGSADSDCVC
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