prot_S-ischiensis_contig9.20791.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20791.1
Unique Nameprot_S-ischiensis_contig9.20791.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length319
Homology
BLAST of mRNA_S-ischiensis_contig9.20791.1 vs. uniprot
Match: A0A6H5KPE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPE1_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.750e-21
Identity = 71/197 (36.04%), Postives = 102/197 (51.78%), Query Frame = 0
Query:   58 ERTTRALNRLVDVVFTAGDLFGQTGGPPR-------HMSASL--ADEDPEKSSSSPTPVE-DGPSLSSLGVGQPGAVALTLPPGEPEPEAPSLWRRIGAKARAARNKQFSVSAEAVTAALVDGPFSILEEYMTLPVSEYSVIDNSVIARTGDDSFRFQVPLRDLIGVDMTPTLDVSVDVDPSAREVTMRTTCSTLYG 244
            +R +RALNR +  +   GD+FG  G           H ++++  AD+D   S      +E +G    +  +   G         E       L +          N+       A  A +VDGPFS L+ YMTLPVSEYS++D+S+I R  D SFRFQ+PL+D +G+D TPT++V V++D  A  V  R+T STLYG
Sbjct:  121 QRVSRALNRALGNILATGDMFGSVGNGVSDGNSFGGHFTSAVGQADKDDGSSDEEEEDIEGEGGHADTEDLPGNGLSPRKFRQEERWCSRLLLGKSXXXXXXXXXNRLLRAKTGASAAVVVDGPFSDLQAYMTLPVSEYSLLDSSIIRRVSDTSFRFQIPLKDFVGLDFTPTMEVEVELDRPAGAVVFRSTRSTLYG 317          
BLAST of mRNA_S-ischiensis_contig9.20791.1 vs. uniprot
Match: A0A836CBD9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.720e-21
Identity = 71/202 (35.15%), Postives = 99/202 (49.01%), Query Frame = 0
Query:   50 RKSTVAAVERTTRALNRLVDVVFTAGDLFGQTGGPPRHM-SASLADEDPEKSS--SSPTPVEDGPSLSSLGVGQPGAVALTLPPGEPEPEAPSLWRRIGAKARAARNKQFSVSAEAVTAALVDGPFSILEEYMTLPVSEYSVIDNSVIARTGDDSFRFQVPLRDLIGVDMTPTLDVSVDVDPSARE--VTMRTTCSTLYGES 246
            +K  + AV R  R LN +V    T GD+FGQ   PP         D D E ++  SSP+      S SS+ V   G                      G      + K+ +   +   A ++DGPF+ LEEYM  PVS+YS +D+ +I R  D++FR  VPL   +G+D+TPT+DV+VD     RE  + M +  STLYG S
Sbjct:   18 QKGNIKAVSRAVRVLNNIVGSATTLGDMFGQVSSPPVFQHDDDFDDADTETAAALSSPSDALPDASQSSISVNVTGI--------------------NGTSVSVDKLKRVATRGQVGCATVIDGPFTQLEEYMQTPVSQYSTLDDKLITRLDDETFRLAVPLASYVGLDLTPTVDVAVDTSAVQRERLLRMHSLGSTLYGTS 199          
BLAST of mRNA_S-ischiensis_contig9.20791.1 vs. uniprot
Match: D8LLN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN7_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 1.650e-20
Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 0
Query:  153 NKQFSVSAEAVTAALVDGPFSILEEYMTLPVSEYSVIDNSVIARTGDDSFRFQVPLRDLIGVDMTPTLDVSVDVDPSAREVTMRTTCSTLYG 244
            N+    +  A  A +VDGPFS L+ YMTLPVSEYS++D+S+I R  + SFRFQ+PL+D +G+D TPT++V V++D  A  V  R+T STLYG
Sbjct:   81 NRLLRANTGASAAVVVDGPFSDLQAYMTLPVSEYSLLDSSIIRRVSETSFRFQIPLKDFVGLDFTPTMEVEVELDRPAGAVVFRSTRSTLYG 172          
BLAST of mRNA_S-ischiensis_contig9.20791.1 vs. uniprot
Match: I0YRU3_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YRU3_COCSC)

HSP 1 Score: 54.7 bits (130), Expect = 5.740e-5
Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:  178 YMTLPVSEYSVIDNSVIART-GDDSFRFQVPLRDLIGVDMTPTLDVSVDVDPSAREVTMR 236
            Y+ LPV EYS++D S I R  G D+F    PLR + GVD+ PT+ VSV  DP +  V+ R
Sbjct:   62 YLALPVEEYSLLDPSWIKREPGSDTFCLSAPLRGITGVDLEPTVWVSVTPDPESGSVSFR 121          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KPE1_9PHAE1.750e-2136.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CBD9_9STRA5.720e-2135.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LLN7_ECTSI1.650e-2053.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
I0YRU3_COCSC5.740e-548.33Uncharacterized protein n=1 Tax=Coccomyxa subellip... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018971Protein of unknown function DUF1997PFAMPF09366DUF1997coord: 175..242
e-value: 3.7E-6
score: 27.2
NoneNo IPR availablePANTHERPTHR34131:SF3coord: 155..233
NoneNo IPR availablePANTHERPTHR34131FAMILY NOT NAMEDcoord: 155..233
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3260082..3263810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20791.1mRNA_S-ischiensis_contig9.20791.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 3260082..3263812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20791.1 ID=prot_S-ischiensis_contig9.20791.1|Name=mRNA_S-ischiensis_contig9.20791.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=319bp
GLRAGAAVTRVVMRYTCPARAVGAVLALAAGGAGFSHSGPRLWMGAPASR
KSTVAAVERTTRALNRLVDVVFTAGDLFGQTGGPPRHMSASLADEDPEKS
SSSPTPVEDGPSLSSLGVGQPGAVALTLPPGEPEPEAPSLWRRIGAKARA
ARNKQFSVSAEAVTAALVDGPFSILEEYMTLPVSEYSVIDNSVIARTGDD
SFRFQVPLRDLIGVDMTPTLDVSVDVDPSAREVTMRTTCSTLYGESPSHG
TPLGAWTAALAATTGAGGAGAPAGAAAAAAEHPNRSAANQGVAGGGLDDD
EGRYGGGGGSPGSPHRAEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018971DUF1997