prot_S-ischiensis_contig9.20785.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20785.1
Unique Nameprot_S-ischiensis_contig9.20785.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length139
Homology
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BLAST of mRNA_S-ischiensis_contig9.20785.1 vs. uniprot
Match: A0A6H5JSL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL4_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 4.220e-14
Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0 
Query:    2 GLVLASVGRDFGWEVGMVMRLGQLVCEGSLIEVVDVREQDARLRRALWVLIASTAAPQAVGHL 64
            GLVLAS GR  G+E  +V RLG+LVCEG+LIEVVDV ++D  LRRALW L AS   P+A   L
Sbjct: 1040 GLVLASAGRRLGFEASLVERLGRLVCEGALIEVVDVHKEDTMLRRALWTLTASLCFPKATSCL 1102
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BLAST of mRNA_S-ischiensis_contig9.20785.1 vs. uniprot
Match: D8LN51_ECTSI (Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN51_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 7.750e-14
Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:    2 GLVLASVGRDFGWEVGMVMRLGQLVCEGSLIEVVDVREQDARLRRALWVLIASTAAPQAVGHL 64
            GLVLAS GR  G+E  +V RLG+LVCEG LIEVVDV ++D  LRRALW L AS   P+A   L
Sbjct: 1178 GLVLASAGRRLGFEASLVERLGRLVCEGVLIEVVDVHKEDTMLRRALWTLTASLCLPRAAACL 1240
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSL4_9PHAE4.220e-1461.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN51_ECTSI7.750e-1461.90Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3197690..3198687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20785.1mRNA_S-ischiensis_contig9.20785.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 3197689..3198687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20785.1 ID=prot_S-ischiensis_contig9.20785.1|Name=mRNA_S-ischiensis_contig9.20785.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=139bp
EGLVLASVGRDFGWEVGMVMRLGQLVCEGSLIEVVDVREQDARLRRALWV
LIASTAAPQAVGHLYQRPSSPPEDPQHEDHHRHRHQHQHKHQPPLPPPQQ
QNAGGQPNHPPQGPGGVHAATFHTQAEKSPRGASAEEPP
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