prot_S-ischiensis_contig9.20781.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20781.1
Unique Nameprot_S-ischiensis_contig9.20781.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length169
Homology
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BLAST of mRNA_S-ischiensis_contig9.20781.1 vs. uniprot
Match: A0A6H5JD87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD87_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.730e-55
Identity = 93/165 (56.36%), Postives = 117/165 (70.91%), Query Frame = 0 
Query:    5 ELVEALFLLVTEWVRELPGWSLRWLEAWMSVALGSMNVRHREAARAVLGFVQECCRQRADPAFQVAFRALLQEGGLGPPLVQALLTAICGAMPSWMLEDLVQSVRLLFDAFTPAAVIPWVSHTLQQDAFPRSGVSAEAKAAFTQRLKEDFVGRDFRSFKTGLKAF 169
            ELVEALF L+ EWV+ELP  SLRWLEAW+SVA+  + VRHR  ARAVLG +Q CC QR  P F   F ALL+   LG  L + LL+ +CGAMPSWML+DLV +VR LFD+ +PAA    +   L+  +F R  V+ E K AF+++LKEDF  +D+R+FK GLKAF
Sbjct:   75 ELVEALFKLMAEWVKELPVPSLRWLEAWLSVAVSGLAVRHRGPARAVLGLIQACCSQRKSPQFTATFSALLRGTALGVALARGLLSGMCGAMPSWMLDDLVLTVRSLFDSLSPAAASSCIDAVLRDPSFERYSVTNEHKVAFSRKLKEDFCNKDWRAFKAGLKAF 239
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BLAST of mRNA_S-ischiensis_contig9.20781.1 vs. uniprot
Match: D7FSA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA3_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 1.290e-32
Identity = 77/165 (46.67%), Postives = 94/165 (56.97%), Query Frame = 0 
Query:    5 ELVEALFLLVTEWVRELPGWSLRWLEAWMSVALGSMNVRHREAARAVLGFVQECCRQRADPAFQVAFRALLQEGGLGPPLVQALLTAICGAMPSWMLEDLVQSVRLLFDAFTPAAVIPWVSHTLQQDAFPRSGVSAEAKAAFTQRLKEDFVGRDFRSFKTGLKAF 169
            ELVEALF L+ EWV+ELP  SLRWLEAW+SVA+  + VRHR  ARAVLG +Q CC QR  P F   F ALL+   LG  L + LL+ +CGAMPSWML+D V                     T+Q+D   + G+ AEA+  F Q+  E    R     K  L AF
Sbjct:  205 ELVEALFKLMAEWVKELPVPSLRWLEAWLSVAVSGLAVRHRGPARAVLGLIQACCSQRKSPQFTATFSALLRGTALGVALTRGLLSGMCGAMPSWMLDDHVL--------------------TVQRDQRAQGGLLAEAEGRFLQQGLEGVQERTPGIPKPPLGAF 349
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD87_9PHAE1.730e-5556.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSA3_ECTSI1.290e-3246.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..162
e-value: 1.4E-16
score: 61.8
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 6..160
NoneNo IPR availablePANTHERPTHR12363:SF33IMPORTIN-13coord: 6..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3161264..3163295 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20781.1mRNA_S-ischiensis_contig9.20781.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 3161261..3163295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20781.1 ID=prot_S-ischiensis_contig9.20781.1|Name=mRNA_S-ischiensis_contig9.20781.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=169bp
MSRVELVEALFLLVTEWVRELPGWSLRWLEAWMSVALGSMNVRHREAARA
VLGFVQECCRQRADPAFQVAFRALLQEGGLGPPLVQALLTAICGAMPSWM
LEDLVQSVRLLFDAFTPAAVIPWVSHTLQQDAFPRSGVSAEAKAAFTQRL
KEDFVGRDFRSFKTGLKAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like