prot_S-ischiensis_contig9.20775.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20775.1
Unique Nameprot_S-ischiensis_contig9.20775.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length230
Homology
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: D7FSA2_ECTSI (Xpo1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA2_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.620e-67
Identity = 115/212 (54.25%), Postives = 151/212 (71.23%), Query Frame = 0
Query:   19 GGAGKMEDDALARDVALLRNALLVMLGAGRNGPNQNPKQRLLAAEWLHSFRKKDETWGACLAVVSAPTGHLTGQVSPEEQLFASQALLYKCRRRQQAITGADVQTLCQLALRFAVPGMRPVLTQLCLGICACAIRHVDWEVSSVLPDLLRFCEEAAAHAAPGDPGPRLLMLELLTVLPEEAELKYGITVTPQRRASFLAALREGPGGGSLAV 230
            G AG    +A+ RDV  L+ A+ V+LG     P+ +PK+RL A EWLHSF+++D+ W AC+AV+ AP G    QV   EQ+FASQALLYKCRRR+ AI+G DV  L QLAL+F   G+R VL QLCLG+CACA+RH  W+ S V+PD++ +C++A+  A  GDPGPR+LMLELLTVLP+EA  + GI+  P+RR  FL  LR+G   G LA+
Sbjct:    6 GMAGAPTPEAIDRDVRTLKEAVRVVLGGYGGTPSGDPKERLRATEWLHSFQRRDDAWSACVAVLGAPRGVADNQVGLNEQIFASQALLYKCRRRRAAISGDDVGCLLQLALQFTGRGLRAVLVQLCLGVCACAVRHSGWDSSKVVPDMVMYCQKASEDAGHGDPGPRVLMLELLTVLPDEATARAGISAPPERRREFLWTLRQGGEAGRLAL 217          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: A0A6H5L1R2_9PHAE (Xpo1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1R2_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 6.700e-40
Identity = 86/187 (45.99%), Postives = 109/187 (58.29%), Query Frame = 0
Query:   80 AVVSAPTGHLTGQVSPEEQLFASQALLYKCRRRQQAITGADVQTLCQLALRFAVPGMRPVLTQ------------------------------------LCLGICACAIRHVDWEVSSVLPDLLRFCEEAAAHAAPGDPGPRLLMLELLTVLPEEAELKYGITVTPQRRASFLAALREGPGGGSLAV 230
            AV+ AP G    QV   EQ+FASQALLYKCRRR+ AI+G DV  L QLAL+F   G+R VL Q                                    LCLG+CACA+RH  W+ S V+PD++ +C++A+     GDPGPR+LMLELLTVLP+EA  + GI+  P+RR  FL  LR+G   G LA+
Sbjct:   25 AVLGAPRGVADNQVGLNEQIFASQALLYKCRRRKAAISGDDVGCLLQLALQFTGRGLRAVLVQEQNVSRPSLLPIATRPFLKSVSLGCLCKHGRNPELKLCLGVCACAVRHSGWDSSKVVPDMVMYCQKASEDTGHGDPGPRVLMLELLTVLPDEATARAGISAPPERRKEFLWTLRQGGEAGRLAL 211          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: A0A383V7P9_TETOB (Importin N-terminal domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V7P9_TETOB)

HSP 1 Score: 63.9 bits (154), Expect = 3.880e-8
Identity = 57/167 (34.13%), Postives = 76/167 (45.51%), Query Frame = 0
Query:   61 AAEWLHSFRKKDETWGACLAVVSAPTGHLTGQVSPEEQLFASQALLYKCRRRQQAITGADV----QTLCQLALRFAVPGMRPVLTQLCLGICACA--IRHVDWEVSSVLPDLL-RFCEEAAAHAAPGDPGPRLLMLELLTVLPEEAELKYGITVTPQRRASFLAALR 220
            A  WL  ++   E W    A++  P+         E   F +Q L  K +R  + +    V     +L QL LRF   G   V TQLCL + A A  +    W    VL  L+ RF  +  A A          MLELLTVLP+EA+ +  I   P+RRA+F A LR
Sbjct:   24 ADRWLERWQSSSEAWTVANAILHNPSS------GAEYTYFCAQTLKTKVQRDYEELPAESVPQLRDSLLQLLLRFG-HGSPAVRTQLCLAMAALAAHLPAAQWSEGGVLRWLMERFSGQDPAVAMS-------CMLELLTVLPQEADSRK-IACRPERRAAFAAELR 175          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: A0A7S0IQ92_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IQ92_9EUKA)

HSP 1 Score: 62.0 bits (149), Expect = 4.210e-8
Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 0
Query:   48 RNGPNQNPKQRLLAAEWLHSFRKKDETWGACLAVVSAPTGHLTGQVSPEEQLFASQALLYKCRRRQQAITGADVQTLCQLALRFAV---PGMRPVLTQLCLGICACAIRHVDWEVSSVLPDLLRFCEEAAAHAAPGDPGPRLLMLELLTVLPEEAELKYGITVTPQRRASF 215
            +  P   P Q   A +WL  F+   E W     ++S         +S    +FA+Q +  K +     +     + L    +   V    G  PVLTQLCL I   A+    W+  +V+PDL++     A  A    P     +LELL VLPEEAE  Y + V P++R  F
Sbjct:   11 QQNPGSTPAQLKEANKWLEHFQGTTEAWTTADQLLSLDNSSNDPLLSATH-VFAAQTMRTKIQYDWAELPADSHKALRSSLMAHIVRFGQGPGPVLTQLCLAIATLALHMESWK--TVVPDLIQALTTPAEQATSKLP----CLLELLGVLPEEAE-NYKVGVIPRQRDEF 173          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: A0A7S4FDD1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FDD1_CHRCT)

HSP 1 Score: 61.2 bits (147), Expect = 3.110e-7
Identity = 64/211 (30.33%), Postives = 92/211 (43.60%), Query Frame = 0
Query:   36 LRNALLVMLGAGRNGPNQNPKQRLLAAEWLHSFRKKDETWGACLAVVSAP----------TGHLT----GQVS---------PEEQLFASQAL----LYKCRRRQQAITGADVQTLCQLALRFAVPGMRPVLTQLCLGICACAIRHVDWEVSSVLPDLLRFCEEAAAHAAPGDPGPRLLMLELLTVLPEEAELKYGITVTPQRRASFLAAL 219
            +R A LV   +G       P+Q   A  WL SF+   E W     ++S             G LT    G V+         P   +FA+Q +    +Y      +    A   +L    +RF   G  PVLTQLCL +   A+   +W   +V+PDL++     A  A    P     +LELLTVLPEEAE  + + V P++R +F  A+
Sbjct:    4 VRAAFLVQQSSG-----STPQQLREANTWLESFQSTREAWTVADQLLSLTDDTPADNANSNGALTALNGGGVANGASRDPLLPSLHVFAAQTMRTKIVYDWAELPKESHAALRGSLIAHVVRFG-QGPGPVLTQLCLAVATMALHMDEWR--TVVPDLIQALTTPAESATTKLP----CLLELLTVLPEEAE-NFKVAVLPKQREAFRQAV 201          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: A0A2V0NVM0_9CHLO (Importin N-terminal domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NVM0_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 1.790e-6
Identity = 55/175 (31.43%), Postives = 80/175 (45.71%), Query Frame = 0
Query:   52 NQNPKQRLLAAEWLHSFRKKDETWGACLAVVSAPTGHLTGQVSPEEQLFASQALLYKCRRRQQAITGADV----QTLCQLALRFAVPGMRPVLTQLCLGICACAIRHVDWEVSSVLPDLLRFCEEAAAHAAPGDPGPRL-LMLELLTVLPEEAELKYGITVTPQRRASFLAALRE 221
            +++   ++ A +WL  +++  E W     V+  P        S + Q F +Q L  K +R  + +    V     +L  L +RFA      V TQL L + A A  HV          L  F E  AA A  G     L  MLE+LTVLP+EA+ +  I   P+RRA+F   LR+
Sbjct:   16 SEDQATKVEANKWLDQWQQTPEAWSVADRVLHDPAS------SQDLQQFCAQTLKTKVQRDFEELPPEAVPALRDSLFALLIRFAAARAAAVRTQLALALAALAA-HVPAPAWGEGGALRWFAERFAAQAGAGAGEVGLSCMLEMLTVLPQEADSRK-IACRPERRAAFEEELRQ 182          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: R1CGE8_EMIHU (Xpo1 domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CGE8_EMIHU)

HSP 1 Score: 58.9 bits (141), Expect = 1.830e-6
Identity = 53/182 (29.12%), Postives = 74/182 (40.66%), Query Frame = 0
Query:   51 PNQNPKQRLLAAEWLHSFRKKDETWGACLAVVSAPTGHLTGQVSPEEQLFASQALLYKCRRRQQAITGADVQTLCQLALRFAV---PGMRPVLTQLCLGICACAIRHVDWEVSSVLPDLLRFCEEAAAHAAPGDPGPRL---------LMLELLTVLPEEAELKYGITVTPQRRASFLAALR 220
            P   P+    A  WL  F+   E W     ++S P   +    +    +FA+Q L  K +     +       L    L  AV    G + VLTQLCL +   A+    W     +P+L+       A A    P   L          +LELLTV+PEEAE  + + V P+RR  F   LR
Sbjct:   14 PQARPEHIRDANLWLERFQSTTEAWTVADGLLSLPAEQVG---NGSAHVFAAQTLRAKIQYDWAELPPQSHAALRDSLLAHAVRYSAGPQVVLTQLCLAVATLALHMEAW--GQAVPELIGRFTSPPAEALANPPFGSLPLLALAKLPCLLELLTVMPEEAE-NFKVAVMPRRRDEFRGLLR 189          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: A0A6H5KUP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP5_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 4.790e-6
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 0
Query:   38 NALLVMLGAGRNGPNQNPKQRLLAAEWLHSFRKKDETWGACLA 80
            NA+ V+LG     P+ +PK+RL A EWLHSF+++D+ W AC+A
Sbjct:   64 NAVRVVLGGYGGTPSGDPKERLRATEWLHSFQRRDDAWSACVA 106          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: A0A0D2JDW3_9CHLO (Importin N-terminal domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JDW3_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 6.860e-6
Identity = 55/165 (33.33%), Postives = 79/165 (47.88%), Query Frame = 0
Query:   61 AAEWLHSFRKKDETWGACLAVVSAPTGHLTGQVSPEEQLFASQALLYKCRRRQQAITGADV----QTLCQLALRFAVPGMRPVLTQLCLGICACAIRHVDWEVSSVLPDLLR-FCEEAAAHAAPGDPGPRLLMLELLTVLPEEAELKYGITVTPQRRASFLAALR 220
            A  WL ++++  E WG    V+  P+       S + Q F +Q L  K +R  + +    V     +L  L LRFA    + V TQL L + A A  HV          +LR F E  A+ A+         MLE+LTVLP+EA+ +  I+  P+RRA+F   LR
Sbjct:   25 ANRWLDTWQQTPEAWGVSDRVLHDPSS------SQDLQQFCAQTLKTKVQRDFEELPQDAVPQLRDSLFALLLRFANARAQAVRTQLALALAALAA-HVPAAAWGGEGGVLRWFAERFASQASDVALS---CMLEILTVLPQEADSRK-ISCRPERRAAFQEELR 178          
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Match: A0A8H6XWM2_9AGAR (Importin N-terminal domain-containing protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6XWM2_9AGAR)

HSP 1 Score: 56.2 bits (134), Expect = 1.470e-5
Identity = 54/194 (27.84%), Postives = 84/194 (43.30%), Query Frame = 0
Query:   32 DVALLRNALLVMLGAGRNGPNQNPKQRLLAAEWLHSFRKKDETWGACLAVVSAPTGHLTGQVSPEEQLFASQALLYKCRRRQQAITGADVQTLCQL---ALRFAVPGMRPVLTQLCLGICACAIRHVDWEVSSVLPDLLRFCEEAAAHAAPGDPGPRLLMLELLTVLPEEAELKYGITVTP----QRRASFLAA 218
            DV  + +AL V  GA    P++   +R  A  WL  F+   + W  C  ++      LT  V P  QLFA+Q    K       +  A++ +       AL+    G +PV  QLCL I   A++   W       + ++F  ++       +P    ++LE LT+LPEE    + I +T     +R A  L A
Sbjct:    3 DVQAVLSALAVFDGA----PDKVSLER--ANTWLQDFQHSPDAWATCNVLL------LTPNVPPSAQLFAAQTFRAKVTYDLHQVDPANLPSFRDTLIAALQRHHNGPKPVKIQLCLAIAGLALQFPAWS------NAVQFMIDSFGR----NPETVPILLEFLTILPEELNNNHKIPITDDEYTEREAYLLTA 174          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20775.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D7FSA2_ECTSI1.620e-6754.25Xpo1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L1R2_9PHAE6.700e-4045.99Xpo1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A383V7P9_TETOB3.880e-834.13Importin N-terminal domain-containing protein n=2 ... [more]
A0A7S0IQ92_9EUKA4.210e-830.41Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S4FDD1_CHRCT3.110e-730.33Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A2V0NVM0_9CHLO1.790e-631.43Importin N-terminal domain-containing protein n=1 ... [more]
R1CGE8_EMIHU1.830e-629.12Xpo1 domain-containing protein n=1 Tax=Emiliania h... [more]
A0A6H5KUP5_9PHAE4.790e-651.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0D2JDW3_9CHLO6.860e-633.33Importin N-terminal domain-containing protein n=1 ... [more]
A0A8H6XWM2_9AGAR1.470e-527.84Importin N-terminal domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 48..223
e-value: 5.6E-22
score: 79.6
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 51..221
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 52..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:3144539..3148331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20775.1mRNA_S-ischiensis_contig9.20775.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 3144539..3148333 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20775.1 ID=prot_S-ischiensis_contig9.20775.1|Name=mRNA_S-ischiensis_contig9.20775.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=230bp
APARLASGIVPSREEAGTGGAGKMEDDALARDVALLRNALLVMLGAGRNG
PNQNPKQRLLAAEWLHSFRKKDETWGACLAVVSAPTGHLTGQVSPEEQLF
ASQALLYKCRRRQQAITGADVQTLCQLALRFAVPGMRPVLTQLCLGICAC
AIRHVDWEVSSVLPDLLRFCEEAAAHAAPGDPGPRLLMLELLTVLPEEAE
LKYGITVTPQRRASFLAALREGPGGGSLAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold