prot_S-ischiensis_contig9.20759.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20759.1
Unique Nameprot_S-ischiensis_contig9.20759.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length270
Homology
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BLAST of mRNA_S-ischiensis_contig9.20759.1 vs. uniprot
Match: A0A835YQQ8_9STRA (SH2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 9.680e-11
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0 
Query:    1 QHALIAYENGHFSDEKGRLGLFATLEDFLRSKISSLARHPLRFRRAEGSCRFVLVED 57
            QH LI YE GH++D++GRLG F TLE+ L+SK++ LA  PLRFRR  GS R+  V D
Sbjct:  382 QHVLINYEQGHYTDQQGRLGRFPTLEELLQSKVAQLATRPLRFRRVHGSGRYDRVTD 438
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BLAST of mRNA_S-ischiensis_contig9.20759.1 vs. uniprot
Match: A0A6H5JYW2_9PHAE (SH2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.610e-10
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0 
Query:    1 QHALIAYENGHFSDEKGRLGLFATLEDFLRSKISSLARHPLRFRRAEGSCRFVLVE 56
            QHAL+ +E G FSDEKGRLG F+TLE+ L+SKIS++ARHPL FRR      +VL++
Sbjct:  449 QHALLMHEGGFFSDEKGRLGRFSTLEELLKSKISAIARHPLSFRRERNG--YVLID 502
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835YQQ8_9STRA9.680e-1157.89SH2 domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5JYW2_9PHAE1.610e-1060.71SH2 domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2991119..2992644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20759.1mRNA_S-ischiensis_contig9.20759.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2991119..2992645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20759.1 ID=prot_S-ischiensis_contig9.20759.1|Name=mRNA_S-ischiensis_contig9.20759.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=270bp
QHALIAYENGHFSDEKGRLGLFATLEDFLRSKISSLARHPLRFRRAEGSC
RFVLVEDDDDQDGGGGAAGVASSHGGTHLSHASSFSSSTGTDLAHDFFTP
RATRAALPTAHKRPEEDKGGGRGRGGAGPEPATARRHTLGGSGGGSGWDA
AQRWSRGSGGGGGGGSSSSRGPGTGTGGVAMWSEAAAAAAEQQQQRRGLG
LGPGPFSASSSRRRPSSRASSSEGSRGRSRRASEAGADENDYNDNGQHYS
SYGGQERAEARGAGGPAWEV
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