prot_S-ischiensis_contig9.20747.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20747.1
Unique Nameprot_S-ischiensis_contig9.20747.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length284
Homology
BLAST of mRNA_S-ischiensis_contig9.20747.1 vs. uniprot
Match: A0A6H5JKF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF0_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.750e-30
Identity = 95/237 (40.08%), Postives = 131/237 (55.27%), Query Frame = 0
Query:   86 RMSYTVVTEAGENLTSLED-------------------VKDALAHRRYETIVGMANQSIFADLLEA----MQSHFLRPHLNMSIVSQDSSFSLDFAADALHASSLFCLSTVGEG----LRALEMARMRGTVTVSMREKTYRQALLPPEMCMVFDEHIRAAATILAQHPHPESAAAAAE-----------GTRPTLPDLSALRVRLLRAGSGGMGLAAAAGRGLLTNVVAGLGTVVGA 284
            RM Y+VVTE G  L   E                    +++ LA R  + ++ MANQSIFAD+LEA    +Q   LRP L +S++S+D  F LDF++  L A SLF +STVG G       LE+A ++GT +V  R +T  Q LL P++ MVFD+ +R +A +LA H   +  A   E            +  +L  + +LR  L RA + GMG AAAAG GLL NVVAG+G+ +GA
Sbjct:  130 RMRYSVVTEDGRRLGGDEREGAEPGLEGGGRGXXGGSVLREFLAGRVGDAMLRMANQSIFADMLEARFRAIQGRLLRPDLEISVISRDCEFFLDFSSGVLEAHSLFEVSTVGGGGPGAPETLEIAHIKGTASVDSRSQTCTQRLLSPQLRMVFDDAMRTSARVLALHSFMDRGAGMDEFGAGVGVGGLSSSSSSLRRIGSLRDSLARASTDGMGRAAAAGTGLLANVVAGVGSAIGA 366          
BLAST of mRNA_S-ischiensis_contig9.20747.1 vs. uniprot
Match: A0A7S3UTS6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTS6_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 2.450e-12
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   86 RMSYTVVTEAGEN------LTSLEDVKDALAHRRYETIVGMANQSIFADLLEAMQSHFLRPHLNMSIVSQDSSFSLDFAADALHASSLF 168
            RM Y V+    +       +T+ EDV++ L   ++  +V  ANQS+FADLL A+Q  FLRP LN++I+S+DSSF LD   + + A S F
Sbjct:   35 RMKYEVIPAKSQGQEHDGPITNTEDVQEVLMLHKWSLVVRYANQSLFADLLSAIQDRFLRPDLNVAIISRDSSFKLDLKKETVEAKSEF 123          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20747.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKF0_9PHAE4.750e-3040.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3UTS6_HETAK2.450e-1242.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2930059..2933541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20747.1mRNA_S-ischiensis_contig9.20747.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2930058..2933541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20747.1 ID=prot_S-ischiensis_contig9.20747.1|Name=mRNA_S-ischiensis_contig9.20747.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=284bp
VIVWFEPPTWLRRTTGRTGATGATTMAAGVWILPFPDPKISPGRKFRCCN
TGQLWRWPRKRNGTLKSLRLIWRTLQIPLCEKRSCRMSYTVVTEAGENLT
SLEDVKDALAHRRYETIVGMANQSIFADLLEAMQSHFLRPHLNMSIVSQD
SSFSLDFAADALHASSLFCLSTVGEGLRALEMARMRGTVTVSMREKTYRQ
ALLPPEMCMVFDEHIRAAATILAQHPHPESAAAAAEGTRPTLPDLSALRV
RLLRAGSGGMGLAAAAGRGLLTNVVAGLGTVVGA
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