prot_S-ischiensis_contig9.20726.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20726.1
Unique Nameprot_S-ischiensis_contig9.20726.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length147
Homology
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A6H5L609_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L609_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 5.780e-26
Identity = 51/87 (58.62%), Postives = 67/87 (77.01%), Query Frame = 0
Query:    1 MQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRERW 87
            MQDY+  QPDNLRSYN+V EV ++LQ L WV +D+V HWGID  T+ LA  V+ TL+EFAQGN+GNK  +ATP+L  ++ND+ R R+
Sbjct:  406 MQDYMRRQPDNLRSYNMVTEVCALLQGLEWVTLDDVRHWGIDARTIDLAFTVVRTLVEFAQGNEGNKRTIATPSLTGSINDLFRNRF 492          
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.540e-25
Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 0
Query:    1 MQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRERW 87
            MQDY+  QPDNLR+YN+V EV ++LQ L WV +D+V HWGID  T+ LA  V+ TL+EFAQGN+GNK  +ATP+L  ++ND+ R+R+
Sbjct: 3459 MQDYMRRQPDNLRTYNMVTEVCALLQGLEWVTLDDVRHWGIDARTIDLAFTVVRTLVEFAQGNEGNKRAIATPSLTGSINDLFRKRF 3545          
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Match: A0A7S2SK74_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SK74_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.940e-17
Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 0
Query:    1 MQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAH--WGIDGTTVTLALQVLSTLIEFAQGNQGNKIDLATPALIFTLNDILR 84
            +QDYL +QPDNLRSYN+V EV S LQSL WV+  + +   W ID +   L   +L  L +FAQG++ N++ +ATP LI  LND++R
Sbjct:  398 LQDYLRNQPDNLRSYNLVEEVVSYLQSLEWVMNPHTSQPEWNIDESNAELCRTILHCLTDFAQGSRANQVCIATPQLIICLNDLMR 483          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L609_9PHAE5.780e-2658.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMW8_ECTSI1.540e-2557.47Inositol triphosphate receptor (IP3R)/ Ryanodine r... [more]
A0A7S2SK74_9STRA6.940e-1750.00Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013662RyR/IP3R Homology associated domainPFAMPF08454RIH_assoccoord: 1..82
e-value: 9.7E-11
score: 41.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2850972..2853190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20726.1mRNA_S-ischiensis_contig9.20726.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2850951..2854369 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20726.1 ID=prot_S-ischiensis_contig9.20726.1|Name=mRNA_S-ischiensis_contig9.20726.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=147bp
MQDYLLHQPDNLRSYNVVREVASVLQSLVWVVVDNVAHWGIDGTTVTLAL
QVLSTLIEFAQGNQGNKIDLATPALIFTLNDILRERWVHARVRDEGQFFA
RTQTSEWERRGVPTYASSGPRPWKPFLSLTFTRRDSCAMLHQSIIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013662RIH_assoc-dom