prot_S-ischiensis_contig9.20685.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20685.1
Unique Nameprot_S-ischiensis_contig9.20685.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length149
Homology
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BLAST of mRNA_S-ischiensis_contig9.20685.1 vs. uniprot
Match: D7FT23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT23_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 5.240e-11
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:    8 GVGGWGGAASVAEFEFLLRYFPDYGPKRLIEGVLSPLLADLAWELDGPRRADATRALEAVAHLVDCH 74
            G   W    S    +FLL+YFP+  PKRLIEGVL  +L  ++W+L GPRR +AT AL+AVAH+   H
Sbjct: 1573 GRSAWTDEKSSPGLQFLLKYFPESTPKRLIEGVLPQILEQVSWQLCGPRREEATVALQAVAHISYQH 1639
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT23_ECTSI5.240e-1150.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2649903..2651442 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20685.1mRNA_S-ischiensis_contig9.20685.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2649903..2651442 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20685.1 ID=prot_S-ischiensis_contig9.20685.1|Name=mRNA_S-ischiensis_contig9.20685.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=149bp
MSGEARGGVGGWGGAASVAEFEFLLRYFPDYGPKRLIEGVLSPLLADLAW
ELDGPRRADATRALEAVAHLVDCHRPPSREHEEPRTEEANYAAVVVAGPG
IDDARPGGGGGGGGARGDTGKGKKRGAARETGAMAAAAAEEEPADRQQR
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