prot_S-ischiensis_contig9.20681.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20681.1
Unique Nameprot_S-ischiensis_contig9.20681.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length152
Homology
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BLAST of mRNA_S-ischiensis_contig9.20681.1 vs. uniprot
Match: D7FT23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT23_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 4.550e-32
Identity = 64/131 (48.85%), Postives = 89/131 (67.94%), Query Frame = 0 
Query:    9 LAQMVADVDIHLHNHPSKGEEECSETMMKVRGALPGLMEEYLSPRADPQRVSEMCLFLKMLTGPE-LECDHAAAIFEDGEVRAVALPVLRICALLPLPRFACLQERLVGHVGMLASLWLPRGAPTLLVLFQ 138
            L  ++  ++ HL +H ++  +EC   M  V  +L GL++++ S  A+P RVSEM LF  M +G   LEC+HA  +F +G  RAV+ P+ ++CALLPLPRFA LQ RLV HVG+LASLWLPR A +L+  FQ
Sbjct:   19 LEGVMEKINRHLRDHHARTSDECQAVMSTVERSLEGLVDKHFSVDAEPSRVSEMLLFHVMFSGQSYLECEHAQLVFGEGGARAVSFPIRKLCALLPLPRFAGLQPRLVQHVGLLASLWLPRDAASLVEFFQ 149
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FT23_ECTSI4.550e-3248.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2638485..2640857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20681.1mRNA_S-ischiensis_contig9.20681.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2638485..2640857 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20681.1 ID=prot_S-ischiensis_contig9.20681.1|Name=mRNA_S-ischiensis_contig9.20681.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=152bp
PARHPSDRLAQMVADVDIHLHNHPSKGEEECSETMMKVRGALPGLMEEYL
SPRADPQRVSEMCLFLKMLTGPELECDHAAAIFEDGEVRAVALPVLRICA
LLPLPRFACLQERLVGHVGMLASLWLPRGAPTLLVLFQVHMLGGQCCSTR
A*
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