prot_S-ischiensis_contig9.20679.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: A0A835YVP5_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP5_9STRA) HSP 1 Score: 172 bits (437), Expect = 2.510e-53 Identity = 80/122 (65.57%), Postives = 102/122 (83.61%), Query Frame = 0
Query: 1 MSVTGNKGVGMPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKKGPMFKRIQLWRKFKGHPPVQSSEGPKGQRAAILRKGA 122
MSVTGN G+GMP+ILLHDAEG + TVEVKSG+V RG LDE+EDNMNI++K+++KTD GKT+ L ++Y+RG+QIV VIVPDM+++ MFKRI +WRK+KG+PP +S GQRAAILRK A
Sbjct: 1 MSVTGNAGIGMPVILLHDAEGAVCTVEVKSGEVYRGILDEAEDNMNILMKDILKTDVRGKTSTLSKMYIRGSQIVLVIVPDMLRRAAMFKRIVMWRKYKGNPPSLASSANTGQRAAILRKAA 122
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: A0A6H5L429_9PHAE (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L429_9PHAE) HSP 1 Score: 169 bits (427), Expect = 6.280e-52 Identity = 77/110 (70.00%), Postives = 97/110 (88.18%), Query Frame = 0
Query: 11 MPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKKGPMFKRIQLWRKFKGHPPVQSSEGPKGQRAAILRK 120
MPIILLHDAEGGI+TVE+K+G+V RG LDE+ED+MN++LK+ +KT+ GKT+ LQQLY+RGNQIVF IVP+M++ PMF RI+ WRK+KGHPPV +SEG KGQRAAI+RK
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQWRKYKGHPPVLASEGAKGQRAAIIRK 110
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: A0A6U1QDM6_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QDM6_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.360e-50 Identity = 79/120 (65.83%), Postives = 99/120 (82.50%), Query Frame = 0
Query: 1 MSVTGNKGVGMPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKKGPMFKRIQLWRKFKGHPPVQSSEGPKGQRAAILRK 120
MSVTG +GVG+PII+LHDAEG IVTVE+K+G+ RG LDE+EDNMN IL +V KT GK +++ QLYVRG+QI FV+VPD ++KGPMFKRIQ+WRK+KG+PP S P+GQ AAI+RK
Sbjct: 1 MSVTGKRGVGIPIIMLHDAEGCIVTVELKNGETYRGLLDEAEDNMNCILVDVTKTTPMGKISKVDQLYVRGSQISFVVVPDTLQKGPMFKRIQMWRKYKGNPPSLGSVVPRGQAAAIIRK 120
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: D7FT20_ECTSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT20_ECTSI) HSP 1 Score: 164 bits (416), Expect = 1.830e-49 Identity = 77/112 (68.75%), Postives = 97/112 (86.61%), Query Frame = 0
Query: 11 MPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKKGPMFKRIQLWRKFKGHPPVQSSEGPKGQRAAILRKGA 122
MPIILLHDAEGGI+TVE+K+G+V RG LDE+ED+MN++LK+ +KT+ GKT+ LQQLY+RGNQIVF IVP+M++ PMF RI+ RK+KGHPPV +SEG KGQRAAI+RK A
Sbjct: 1 MPIILLHDAEGGIITVELKNGEVCRGVLDEAEDSMNLVLKDCVKTNIRGKTSTLQQLYIRGNQIVFCIVPNMLRNAPMFARIKQGRKYKGHPPVLASEGAKGQRAAIIRKAA 112
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: A0A7S3K1R1_9STRA (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1R1_9STRA) HSP 1 Score: 149 bits (376), Expect = 6.370e-44 Identity = 68/120 (56.67%), Postives = 95/120 (79.17%), Query Frame = 0
Query: 1 MSVTGNKGVGMPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKKGPMFKRIQLWRKFKGHPPVQSSEGPKGQRAAILRK 120
MSVTG +G+G+PIIL+HD EG IVTVE K+GD+ RG LDE+EDNMN I+K+V KT +EGK +Q++ +++RG+QI+F + P M+KK PMFKR++ WRK +G+ + E +GQ AAI+RK
Sbjct: 18 MSVTGKRGIGVPIILMHDGEGTIVTVECKNGDMYRGFLDETEDNMNCIMKDVTKTSAEGKKSQIEHIFIRGSQILFFVFPTMLKKAPMFKRVRTWRKHRGN--ISKGEEARGQAAAIIRK 135
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: I2CSB6_NANGC (Small nuclear ribonucleoprotein Sm D3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CSB6_NANGC) HSP 1 Score: 146 bits (369), Expect = 6.530e-43 Identity = 67/120 (55.83%), Postives = 98/120 (81.67%), Query Frame = 0
Query: 1 MSVTGNKGVGMPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKKGPMFKRIQLWRKFKGHPPVQSSEGPKGQRAAILRK 120
MSVTG GVG+PIILLHDAEGGI+TVE ++G++ RG LDE+EDNMN+IL++V KT+ GK ++++ +Y++G+Q+ F+I+PDM+KK PMFKRI++W+K+ G+ P + G +GQ A I +K
Sbjct: 1 MSVTGKGGVGIPIILLHDAEGGIITVETRTGELYRGLLDEAEDNMNLILRDVTKTNVHGKESKVELIYIKGSQVNFMILPDMLKKAPMFKRIKVWKKYHGNVP-ELGAGVRGQAAVISQK 119
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: F0W7K3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7K3_9STRA) HSP 1 Score: 146 bits (369), Expect = 6.530e-43 Identity = 68/125 (54.40%), Postives = 94/125 (75.20%), Query Frame = 0
Query: 1 MSVTGNKGVGMPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKKGPMFKRIQLWRKFKGHPPV-----QSSEGPKGQRAAILRK 120
M+VTG +GVG+P ILLHD EG V++E+KSG++ RG L+E+EDNMN +LKE ++TD G TT ++ +YVRG+QI+F++ PDM+K PMFKR++LW+K KG P GP+GQ AAI+RK
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTTVSIEMKSGEIYRGYLEETEDNMNCVLKEAMRTDINGNTTHVELVYVRGSQILFIVFPDMLKHAPMFKRVKLWKKHKGVIPSLGQGGPGGAGPRGQAAAIIRK 125
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: W4G1B8_9STRA (Small nuclear ribonucleoprotein Sm D3 n=5 Tax=Aphanomyces TaxID=100860 RepID=W4G1B8_9STRA) HSP 1 Score: 141 bits (355), Expect = 9.040e-41 Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 0
Query: 1 MSVTGNKGVGMPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKKGPMFKRIQLWRKFKGHPP---------VQSSEGPKGQRAAILR 119
M+VTG +GVG+P ILLHD EG IVTVE+K+GD+ RG LDE+EDNMN +LK+ I+TD G TT + +Y+RG+QIVF++ PDM+K P FKR++LW+K +G P + GP+GQ A +R
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVTVEMKNGDLYRGYLDETEDNMNCLLKDAIRTDVRGITTHCEHVYLRGSQIVFIVFPDMLKHAPFFKRVKLWKKHRGSIPALGLGGGAHIGLGSGPRGQTGAHMR 128
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: K3X3X6_GLOUD (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3X6_GLOUD) HSP 1 Score: 139 bits (351), Expect = 4.540e-40 Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 0
Query: 1 MSVTGNKGVGMPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDMIKK-----GPMFKRIQLWRKFKGHPPV-----QSSEGPKGQRAAILRK 120
M+VTG +GVG+P ILLHD EG IV++E+KSG+ RG LDE+EDNMN +LK+ ++T+ G TT ++Q+Y+RG QI+F+I PD+ PMFKR++LW+K KG P GP+GQ AAI+RK
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVSIELKSGETYRGFLDETEDNMNCVLKDAVRTELNGSTTHVEQVYIRGGQILFIIFPDIYPSLLPTHAPMFKRVKLWKKHKGSIPALGQGGPGGGGPRGQAAAIIRK 130
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Match: D0NPB0_PHYIT (Small nuclear ribonucleoprotein Sm D3 n=2 Tax=Peronosporaceae TaxID=4777 RepID=D0NPB0_PHYIT) HSP 1 Score: 139 bits (350), Expect = 6.840e-40 Identity = 65/135 (48.15%), Postives = 96/135 (71.11%), Query Frame = 0
Query: 1 MSVTGNKGVGMPIILLHDAEGGIVTVEVKSGDVLRGTLDESEDNMNIILKEVIKTDSEGKTTQLQQLYVRGNQIVFVIVPDM----------IKKGPMFKRIQLWRKFKGHPPVQSSEG-----PKGQRAAILRK 120
M+VTG +GVG+P ILLHD EG IV++E+K+G+ RG LDE+EDNMN ++K+ ++TD G T+Q++Q+Y+RG+QI+F++ PD+ +K PMFKR+++W+K KG P G P+GQ AAI+RK
Sbjct: 1 MAVTGKRGVGIPTILLHDGEGTIVSIEMKTGETYRGLLDETEDNMNCVMKDAVRTDINGNTSQVEQVYLRGSQILFIVFPDIYPLQPDIAVTLKHAPMFKRVKMWKKHKGSIPTLGQGGVGGGAPRGQAAAIIRK 135 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig9.20679.1 ID=prot_S-ischiensis_contig9.20679.1|Name=mRNA_S-ischiensis_contig9.20679.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=129bpback to top |