prot_S-ischiensis_contig9.20663.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20663.1
Unique Nameprot_S-ischiensis_contig9.20663.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length181
Homology
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 1.390e-50
Identity = 89/180 (49.44%), Postives = 124/180 (68.89%), Query Frame = 0
Query:    2 ARSLGVALPEDFNDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALGIIPNKIPVIGAMNR 181
            A++ G+ALPEDFND  PT  DK +S LP+ LPL+DSL+F  H+F  +P Q ++ +PL+A+L++YRS+PFSGL  FFG+Q       + A KPEVNKLVRFNLRQA+ LDIA+ FP+  A +   V       DS    PLA   +D +FV V+A + +S+ SSA+G++P  +P++G MNR
Sbjct:  249 AKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQ-------WFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSV----LGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNR 417          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.550e-48
Identity = 85/172 (49.42%), Postives = 117/172 (68.02%), Query Frame = 0
Query:   10 PEDFNDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALGIIPNKIPVIGAMNR 181
            P D ND   T  DKA+S LP++LPL D ++FA HLF A+PEQ AWA+PL+A+L+  RS+PF+ L  FF + V +         P++NKLVRFN++QAINLDIAL+ P  + ++   V      +D+    PLA   SD VFVA+LAA+A+SVG+SA G  PNK+P++G +NR
Sbjct:   23 PGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGS-------SNPQINKLVRFNMQQAINLDIALILPGVVGAITGAV----LGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNR 183          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 8.320e-48
Identity = 86/172 (50.00%), Postives = 116/172 (67.44%), Query Frame = 0
Query:   10 PEDFNDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALGIIPNKIPVIGAMNR 181
            P D ND   T  DKA+S LP++LPL D ++FA HLF A+PEQ AWAQPL A+L+  RS+PF+ L  FF + V +         P++NKLVRFN++QAINLDIAL+ P  + ++   V      +D+    PLA   SD VFVA+LAA+A+SVG+SA G  PNK+P++G +NR
Sbjct:  105 PGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGS-------SNPQINKLVRFNMQQAINLDIALILPGVVGAITGAV----LGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNR 265          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 166 bits (420), Expect = 1.650e-46
Identity = 89/168 (52.98%), Postives = 118/168 (70.24%), Query Frame = 0
Query:   14 NDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALGIIPNKIPVIGAMNR 181
            ND   TA DKA+S LP+LLPL+D + FAGHLF A+PEQ AWAQPL A+L+  RS+PF+ L  FF +         L+G P+VNKLVRFN++QAINLDIAL+ P  L +LA++        D+    PLA+  SD VFVA+LAA+A+SV +S+ G  PNK+P++G +NR
Sbjct:  247 NDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSA-------LSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASV----SLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNR 403          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 1.650e-46
Identity = 86/175 (49.14%), Postives = 118/175 (67.43%), Query Frame = 0
Query:    7 VALPEDFNDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALGIIPNKIPVIGAMNR 181
            V  P D ND   T  DKA+S LP++LPL D ++FA HLF A+PEQ AWAQPL A+L+  RS+PF+ L  FF + +        +  P++NKLVRFN++QAINLDIAL+ P  + ++   V      +D+    PLA  +SD VFVA+LAA+A+SVG+SA G  PNK+P++G +NR
Sbjct:  239 VVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSI-------WSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAV----LGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNR 402          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.770e-40
Identity = 80/161 (49.69%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    7 VALPEDFNDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALG 167
            V  P D ND   T  DKA+S LP+LLPL+D ++FA HLF A+PEQ AWAQPL A+L+  RS+PF+ L  FF + + +         P VNKLVRFN++QAINLDIAL+ P  + +    +      AD++   PL+   SD VFVA+LAA+A+SVG+SA G
Sbjct:  239 VVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGS-------SNPRVNKLVRFNMQQAINLDIALILPGVVGA----ITGGMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 4.330e-34
Identity = 66/163 (40.49%), Postives = 106/163 (65.03%), Query Frame = 0
Query:   19 TALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALGIIPNKIPVIGAMNR 181
            T+L+KA+  LP++LPL D +++A H++S +P+Q AW++PL+A+L+   ++PF+ L AFFGM +       L+    +NKL+RFN+ QAIN DIAL+ P+    L          +D+    P+   A+D + V+++ A+A+S+ +SA G IPNKIP  G +NR
Sbjct:  247 TSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSI-------LSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLT----WSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINR 398          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 5.750e-28
Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 0
Query:   53 AWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALGIIPNKIPVIGAMNR 181
            AWAQPL A+L+  RS+PF+ L  FF + V    +      P+VNKLVRFN +QAIN+DIAL+ P  + ++A  V      AD++   PLA   SD VFVA+LAA+A+SVG+SA G  PNK+P++G +NR
Sbjct:  177 AWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRN------PQVNKLVRFNTQQAINVDIALILPGVVGAIAGAV----LGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNR 295          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 6.910e-28
Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 0
Query:    7 VALPEDFNDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFP 116
            V  P D ND   T  DKA+S LP++LPL D ++FA HLF A+ EQ AWAQPL A+L+  RS+PF+ L  FF + + +         P++NKLVRFN++QAINLDIAL+ P
Sbjct:  239 VVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGS-------SNPQINKLVRFNMQQAINLDIALILP 341          
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Match: A0A1Z5J9Q6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9Q6_FISSO)

HSP 1 Score: 115 bits (287), Expect = 2.830e-27
Identity = 74/167 (44.31%), Postives = 96/167 (57.49%), Query Frame = 0
Query:   14 NDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPEQFAWAQPLLALLVV----YRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVRFNLRQAINLDIALLFPAALASLAALVGXXXXXADSLLTGPLAQTASDAVFVAVLAAIAHSVGSSALGIIPNKIPVI 176
            ND  PT  D+ VS LP+L PL+D L +A  L     +      PL  L +V    YR+IPF G  AFF +        ++AGKPE+N+LVRFN +QAI LDIAL FP  +  L A++G             LA+  +DA+F  + AAI +SVGSS LGI P+KIP I
Sbjct:  182 NDGPPTPTDRIVSVLPYLFPLMDGLQYASFLLLKNQDN-----PLAVLSLVTYTLYRAIPFGGFIAFFAL-------FYVAGKPEINRLVRFNTQQAIYLDIALFFPGLITGLFAILGGPVDPT-------LAEITNDAIFFTLAAAILYSVGSSLLGIYPDKIPFI 329          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTM8_ECTSI1.390e-5049.44TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]
A0A6H5KVD7_9PHAE1.550e-4849.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUU9_9PHAE8.320e-4850.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A2I6U1M4_SACJA1.650e-4652.98Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
D8LS19_ECTSI1.650e-4649.14EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D7FRG5_ECTSI2.770e-4049.69EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5JY95_9PHAE4.330e-3440.49EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5JBJ0_9PHAE5.750e-2849.61EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LS20_ECTSI6.910e-2851.82EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1Z5J9Q6_FISSO2.830e-2744.31Uncharacterized protein n=2 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005691Chloroplast protein import component Tic20PFAMPF16166TIC20coord: 22..176
e-value: 4.9E-7
score: 29.7
IPR005691Chloroplast protein import component Tic20PANTHERPTHR33510FAMILY NOT NAMEDcoord: 14..177
NoneNo IPR availablePANTHERPTHR33510:SF5PROTEIN TIC 20-II, CHLOROPLASTICcoord: 14..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..77
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..169
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 78..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..53
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2396392..2397385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20663.1mRNA_S-ischiensis_contig9.20663.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2396392..2397837 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20663.1 ID=prot_S-ischiensis_contig9.20663.1|Name=mRNA_S-ischiensis_contig9.20663.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=181bp
MARSLGVALPEDFNDDTPTALDKAVSGLPFLLPLLDSLIFAGHLFSAYPE
QFAWAQPLLALLVVYRSIPFSGLAAFFGMQVRTHASTFLAGKPEVNKLVR
FNLRQAINLDIALLFPAALASLAALVGGGGGGADSLLTGPLAQTASDAVF
VAVLAAIAHSVGSSALGIIPNKIPVIGAMNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005691Tic20