prot_S-ischiensis_contig9.20627.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20627.1
Unique Nameprot_S-ischiensis_contig9.20627.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length72
Homology
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: D7FWF1_ECTSI (tRNA pseudouridine synthase B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF1_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 3.300e-18
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGCMTALERTKQGPFLLEHTLPQDRWNYDDICQHM 57
            +E GGG YVRT+I DL R LGTR  MTALERTKQGPF L+H L  + W YD +C+H+
Sbjct:   58 LECGGGFYVRTLIEDLGRALGTRAHMTALERTKQGPFELQHALRLEEWEYDRLCKHL 114          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: A0A6H5KMC7_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMC7_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.490e-17
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGCMTALERTKQGPFLLEHTLPQDRWNYDDICQHM 57
            +E GGG YVRT+I DL R LGTR  MTALERTKQGPF L H L  + W YD +C+H+
Sbjct:  136 LECGGGFYVRTLIEDLGRALGTRAHMTALERTKQGPFELRHALRLEEWEYDRLCKHL 192          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: A0A7S2WB30_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB30_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.590e-16
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGC--MTALERTKQGPFLLEHTLPQDRWNYDDICQHMEETRWRVLGEKA 69
            +E  GGTY+R++I+DLARH   + C  MT LERTKQGPF L+H LP  +W +D IC H+E     VL   +
Sbjct:  242 VECSGGTYIRSLISDLARHHSVQSCAHMTLLERTKQGPFTLDHCLPLSQWTFDGICTHVEWCNTNVLAHAS 312          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: A0A835Z9D0_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D0_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.430e-15
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGCMTALERTKQGPFLLEHTLPQDRWNYDDICQHME 58
            ++  GGTY+RT+I D+AR LGTRG MT+L RTKQGPF LEH L Q  W+++ I  H++
Sbjct:  204 VQCSGGTYIRTLIADIARALGTRGHMTSLVRTKQGPFGLEHCLDQQHWHFEQILAHLD 261          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: A0A8J2SXF4_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXF4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.740e-13
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGCMTALERTKQGPFLLEHTLPQDRW-NYDDICQHMEETR 61
            +E  GGTY+RT+I DLAR  G+ G M  LERT+QGPF LEH L  + W ++D +C H+E +R
Sbjct:  222 VECSGGTYIRTLIDDLAREAGSCGHMVELERTRQGPFGLEHCLGDEAWGDFDAVCAHVEASR 283          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: A0A7S1ZFC1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZFC1_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.350e-12
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    4 GGGTYVRTIITDLARHLGTRGCMTALERTKQGPFLLEHTLPQDRWNYDDICQHMEETRWRVLGEK 68
            GGGTY+R+++ D+ R LGT   M +L RTKQGPF LEH L ++ WN D I + +  +    L E+
Sbjct:   46 GGGTYIRSLVRDIGRDLGTYATMISLVRTKQGPFELEHCLDKEDWNADKIYECIRASEKLFLDEE 110          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: F0YN11_AURAN (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN11_AURAN)

HSP 1 Score: 66.6 bits (161), Expect = 4.200e-12
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGC--MTALERTKQGPFLLEHTLPQDRWNYDDICQHM 57
            +E  GGTY+RT+I+DLARH   +    M  LERTKQGPF L   L +  W++D ICQH+
Sbjct:   90 VECSGGTYIRTLISDLARHEAVKSVAHMVELERTKQGPFELGDCLHEADWDFDAICQHL 148          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: L8Y768_TUPCH (tRNA pseudouridine(55) synthase n=2 Tax=Tupaia chinensis TaxID=246437 RepID=L8Y768_TUPCH)

HSP 1 Score: 67.8 bits (164), Expect = 1.050e-11
Identity = 27/58 (46.55%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGCMTALERTKQGPFLLEHTLPQDRWNYDDICQHME 58
            +E GGG Y+R++++D+ + L +   +  L RTKQGPF LEH LP+DRW   DI Q ++
Sbjct:  212 VECGGGFYIRSLVSDIGKELASCASVLELTRTKQGPFSLEHALPEDRWTIADIAQSLQ 269          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: F0YN09_AURAN (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN09_AURAN)

HSP 1 Score: 66.6 bits (161), Expect = 1.490e-11
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGC--MTALERTKQGPFLLEHTLPQDRWNYDDICQHM 57
            +E  GGTY+RT+I+DLARH   +    M  LERTKQGPF L   L +  W++D ICQH+
Sbjct:  181 VECSGGTYIRTLISDLARHEAVKSVAHMVELERTKQGPFELGDCLHEADWDFDAICQHL 239          
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Match: A0A1Z5K540_FISSO (tRNA pseudouridine(55) synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K540_FISSO)

HSP 1 Score: 65.1 bits (157), Expect = 7.830e-11
Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    1 MEVGGGTYVRTIITDLARHLGTRGCMTALERTKQGPFLLEHTLPQDRWNYDDICQHMEETRWRVLGEKA 69
            +E GGGTY+R++I D+A  L T    T L+RTKQGPF LE  L ++ WN D+I   +E  R + L EK 
Sbjct:  207 VECGGGTYIRSLIRDIAYQLDTVATTTYLQRTKQGPFTLEDCLEKEDWNADNIYAAIE--RHQTLQEKT 273          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWF1_ECTSI3.300e-1863.16tRNA pseudouridine synthase B n=1 Tax=Ectocarpus s... [more]
A0A6H5KMC7_9PHAE2.490e-1763.16tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
A0A7S2WB30_9STRA1.590e-1650.70tRNA pseudouridine(55) synthase n=1 Tax=Rhizochrom... [more]
A0A835Z9D0_9STRA1.430e-1556.90tRNA pseudouridine(55) synthase n=1 Tax=Tribonema ... [more]
A0A8J2SXF4_9STRA1.740e-1353.23tRNA pseudouridine(55) synthase n=1 Tax=Pelagomona... [more]
A0A7S1ZFC1_9STRA3.350e-1246.15Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
F0YN11_AURAN4.200e-1252.54tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
L8Y768_TUPCH1.050e-1146.55tRNA pseudouridine(55) synthase n=2 Tax=Tupaia chi... [more]
F0YN09_AURAN1.490e-1152.54tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
A0A1Z5K540_FISSO7.830e-1147.83tRNA pseudouridine(55) synthase n=1 Tax=Fistulifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 1..66
e-value: 3.2E-12
score: 48.5
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2036071..2037969 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20627.1mRNA_S-ischiensis_contig9.20627.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 2036066..2038256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20627.1 ID=prot_S-ischiensis_contig9.20627.1|Name=mRNA_S-ischiensis_contig9.20627.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=72bp
MEVGGGTYVRTIITDLARHLGTRGCMTALERTKQGPFLLEHTLPQDRWNY
DDICQHMEETRWRVLGEKAEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf