prot_S-ischiensis_contig9.20587.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20587.1
Unique Nameprot_S-ischiensis_contig9.20587.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length204
Homology
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BLAST of mRNA_S-ischiensis_contig9.20587.1 vs. uniprot
Match: A0A7S3XL59_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL59_HETAK)

HSP 1 Score: 57.8 bits (138), Expect = 2.390e-6
Identity = 27/61 (44.26%), Postives = 40/61 (65.57%), Query Frame = 0 
Query:    2 PQQPPAKRT---------RRGQ-RRCEHPGCTRWPSYGWEGEKPRFCAPHRLDGMVNVVSR 52
            P QPPA+R+         +RG   +C+  GCT+W +YG++G+KP +C PH L GMV++ SR
Sbjct:  291 PPQPPAQRSGTKPAAKTFKRGPVTKCQAQGCTKWCTYGYDGQKPMYCKPHMLPGMVDMASR 351
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BLAST of mRNA_S-ischiensis_contig9.20587.1 vs. uniprot
Match: A0A835ZB16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB16_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.340e-5
Identity = 22/38 (57.89%), Postives = 29/38 (76.32%), Query Frame = 0 
Query:   15 RRCEHPGCTRWPSYGWEGEKPRFCAPHRLDGMVNVVSR 52
            R C   GCTR PS+G++G+ P+FCA H++ GM NVVSR
Sbjct:  109 RHCTAEGCTRQPSFGYDGQPPQFCATHKVAGMSNVVSR 146
[Close]
BLAST of mRNA_S-ischiensis_contig9.20587.1 vs. uniprot
Match: A0A7S3Y689_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y689_HETAK)

HSP 1 Score: 52.8 bits (125), Expect = 2.050e-5
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 0 
Query:   15 RRCEHPGCTRWPSYGWEGEKP--RFCAPHRLDGMV 47
            +RC HPGC +WPS+ +EGE+   RFCA H+L GMV
Sbjct:    6 KRCHHPGCIKWPSFSFEGEQKGARFCALHKLPGMV 40
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S3XL59_HETAK2.390e-644.26Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835ZB16_9STRA1.340e-557.89Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y689_HETAK2.050e-560.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 169..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1652679..1657190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20587.1mRNA_S-ischiensis_contig9.20587.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1652670..1657190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20587.1 ID=prot_S-ischiensis_contig9.20587.1|Name=mRNA_S-ischiensis_contig9.20587.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=204bp
MPQQPPAKRTRRGQRRCEHPGCTRWPSYGWEGEKPRFCAPHRLDGMVNVV
SRRCQMDGCSNLASYAYAGSKRPMYCGQHDLEGLVDIRNPRCQFDGCKVC
ARYAHRGERRPVFCTGHKEPGMVAVIGRRCREPSCESQPSYGYKGEITTI
YCAQHKLEGMVDVKHRGQRRKAAEKKAAAQQARQRLVETQQRERQEQRQQ
RHLH
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