prot_S-ischiensis_contig9.20571.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20571.1
Unique Nameprot_S-ischiensis_contig9.20571.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length205
Homology
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BLAST of mRNA_S-ischiensis_contig9.20571.1 vs. uniprot
Match: A0A7S3UXN0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXN0_HETAK)

HSP 1 Score: 66.6 bits (161), Expect = 6.900e-10
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0 
Query:   24 RIGRENSTLLNTHLCKWRME-YAESQNIL-YHNVMGTAEVLDVAYRVPTTKEELGWCKKWGLSKVEMHGGPLLDEINKFLKDNDIAITKDF 112
            RIG + +T L+ HL  WR E   E + +  Y N++  A  L++   VPTTKEEL      G  KV + G  L++EINK+LK+ +I + K F
Sbjct:   46 RIGNKEATALSRHLRSWRKECIVEGKTVSGYWNLLNNATCLEIGSMVPTTKEELRGIPGMGAQKVALIGDQLIEEINKWLKEENIELQKPF 136
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3UXN0_HETAK6.900e-1040.66Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.80coord: 23..110
e-value: 4.3E-11
score: 44.5
IPR002121HRDC domainPFAMPF00570HRDCcoord: 35..97
e-value: 3.8E-7
score: 30.0
IPR002121HRDC domainPROSITEPS50967HRDCcoord: 27..107
score: 12.582
IPR010997HRDC-like superfamilySUPERFAMILY47819HRDC-likecoord: 31..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1485454..1489109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20571.1mRNA_S-ischiensis_contig9.20571.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1485454..1489111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20571.1 ID=prot_S-ischiensis_contig9.20571.1|Name=mRNA_S-ischiensis_contig9.20571.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=205bp
SNRRLATRKGTGFSKRARKGIVSRIGRENSTLLNTHLCKWRMEYAESQNI
LYHNVMGTAEVLDVAYRVPTTKEELGWCKKWGLSKVEMHGGPLLDEINKF
LKDNDIAITKDFIKAHGDEEGGEEAAATGQHAFQGGDGLAGAAEDHDPWG
PRGVSHEPQSGGGLASPADSFSSKFFSLSRGGSALAAWEDSAGAGNSRGD
YAGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002121HRDC_dom
IPR010997HRDC-like_sf