prot_S-ischiensis_contig9.20542.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20542.1
Unique Nameprot_S-ischiensis_contig9.20542.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length72
Homology
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: D8LFK8_ECTSI (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK8_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 5.320e-17
Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    8 LGSAERTPVVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVVGDEQE 71
            L S    P+VG V PGEE  +SV LVAP + G+YEG+WR  D   RRFGQRLW +V+VVG  +E
Sbjct:  133 LSSPPEAPIVGDVSPGEEATVSVDLVAPPQPGMYEGYWRACDDASRRFGQRLWAKVMVVGPGEE 196          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: A0A6H5JTZ0_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ0_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.260e-15
Identity = 35/64 (54.69%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    8 LGSAERTPVVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVVGDEQE 71
            L S    P+VG V PGEE  +SV LVAP + G+YEG+WR  D   R+FGQRLW +V+VVG  +E
Sbjct:  606 LSSPPEAPIVGDVSPGEEVTVSVDLVAPPQPGMYEGYWRACDDASRKFGQRLWAKVMVVGPGEE 669          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: A0A7S2AAX4_9EUKA (Hypothetical protein n=1 Tax=Stereomyxa ramosa TaxID=1078864 RepID=A0A7S2AAX4_9EUKA)

HSP 1 Score: 62.4 bits (150), Expect = 7.690e-10
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0
Query:   20 VQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVV 66
            V PGEE E+SV++VAP   G Y GFWR+    GR+FGQR+WV++ VV
Sbjct:  158 VGPGEEVEVSVNMVAPQPPGHYVGFWRMCSPTGRKFGQRVWVKINVV 204          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: D0MQN8_PHYIT (UBA domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0MQN8_PHYIT)

HSP 1 Score: 62.4 bits (150), Expect = 1.140e-9
Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   11 AERTPVVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVVGDEQEA 72
            A  + ++  V PG+  ++S+ +VAPA+AG Y G+WR+S   G RFGQRLWV + V+  E+ A
Sbjct:  335 APESVLIPSVLPGKSIDVSLRMVAPAKAGRYTGYWRLSTPDGNRFGQRLWVDINVMEPEEPA 396          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: A0A2N2MJ86_9CHLR (PBPb domain-containing protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2N2MJ86_9CHLR)

HSP 1 Score: 62.4 bits (150), Expect = 1.150e-9
Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   16 VVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRV 63
            + G V PG+  +LSV+L+AP EA  Y+GFW++ ++ GRRFGQ +WV +
Sbjct:  387 ISGNVSPGQTIDLSVTLIAPQEAFTYQGFWQIENIDGRRFGQTIWVGI 434          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: A0A3M6VQ72_9STRA (UBA domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQ72_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.560e-9
Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   11 AERTPVVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVVGDEQ 70
            A  + ++  V PG+  ++S+ +VAPA+AG Y G+WR+S   G RFGQRLWV + V+  E+
Sbjct:  329 APESVLIPSVLPGKSIDVSLRMVAPAKAGRYTGYWRLSTADGNRFGQRLWVDINVMDPEE 388          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: A0A662WDN9_9STRA (UBA domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WDN9_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.560e-9
Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   11 AERTPVVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVVGDEQEA 72
            A  + ++  V PG+  ++S+ +VAPA+AG Y G+WR+S   G RFGQRLWV + V+  E  A
Sbjct:  331 APESVLIPSVLPGKSIDVSLRMVAPAKAGRYTGYWRLSTADGNRFGQRLWVDINVMEPEASA 392          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: M4B4F0_HYAAE (UBA domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4F0_HYAAE)

HSP 1 Score: 61.6 bits (148), Expect = 2.130e-9
Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   11 AERTPVVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVVGDEQ 70
            A  + ++  V PG+  ++S+ +VAPA+AG Y G+WR+S   G RFGQRLWV + V+  E+
Sbjct:  333 APESVLIPSVLPGKSIDVSLRMVAPAKAGRYTGYWRLSTPDGNRFGQRLWVDINVMDPEE 392          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: A0A1V9ZB25_9STRA (UBA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB25_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.920e-8
Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 0
Query:   11 AERTPVVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVVG 67
            +ER P+   + PG+  ++SV + AP++   Y GFWR+S   G+RFGQR WV +LVVG
Sbjct:  397 SERLPIPI-LPPGKMIDVSVEMQAPSKPARYTGFWRLSSADGKRFGQRFWVDILVVG 452          
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Match: A0A4P5UYD6_9CHLR (N_BRCA1_IG domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A4P5UYD6_9CHLR)

HSP 1 Score: 55.8 bits (133), Expect = 4.290e-8
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 0
Query:   22 PGEETELSVSLVAPAEAGVYEGFWRVSDMQGRRFGQRLWVRVLVVGDE 69
            PG    ++VS+VAPA AG YEG+WR+SD +G  FG RL++++ V   +
Sbjct:   91 PGTLAVVNVSMVAPAAAGDYEGYWRLSDAKGEPFGSRLYIKITVAAPQ 138          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFK8_ECTSI5.320e-1756.25N_BRCA1_IG domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JTZ0_9PHAE1.260e-1554.69PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2AAX4_9EUKA7.690e-1057.45Hypothetical protein n=1 Tax=Stereomyxa ramosa Tax... [more]
D0MQN8_PHYIT1.140e-945.16UBA domain-containing protein n=13 Tax=Phytophthor... [more]
A0A2N2MJ86_9CHLR1.150e-950.00PBPb domain-containing protein n=2 Tax=Chloroflexi... [more]
A0A3M6VQ72_9STRA1.560e-945.00UBA domain-containing protein n=1 Tax=Peronospora ... [more]
A0A662WDN9_9STRA1.560e-945.16UBA domain-containing protein n=2 Tax=Nothophytoph... [more]
M4B4F0_HYAAE2.130e-945.00UBA domain-containing protein n=1 Tax=Hyaloperonos... [more]
A0A1V9ZB25_9STRA1.920e-847.37UBA domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A4P5UYD6_9CHLR4.290e-847.92N_BRCA1_IG domain-containing protein n=1 Tax=Anaer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 3..71
e-value: 1.9E-13
score: 52.4
IPR032350Next to BRCA1, central domainPFAMPF16158N_BRCA1_IGcoord: 12..65
e-value: 8.9E-13
score: 48.9
NoneNo IPR availablePANTHERPTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDcoord: 20..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1225160..1226970 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20542.1mRNA_S-ischiensis_contig9.20542.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 1225159..1226970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20542.1 ID=prot_S-ischiensis_contig9.20542.1|Name=mRNA_S-ischiensis_contig9.20542.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=72bp
GRGRGVGLGSAERTPVVGGVQPGEETELSVSLVAPAEAGVYEGFWRVSDM
QGRRFGQRLWVRVLVVGDEQEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032350N_BRCA1_central