prot_S-ischiensis_contig9.20505.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20505.1
Unique Nameprot_S-ischiensis_contig9.20505.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length245
Homology
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: D8LSJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSJ6_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.820e-64
Identity = 122/223 (54.71%), Postives = 156/223 (69.96%), Query Frame = 0
Query:   16 ERADPAQDNLFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMA--GDEAGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGDLSAALEVYSAMQTAGVRLDNRSLLALVRLCEAEGHHDIASRIRRERSALPPPTTSR 236
            + A+PA DNLFRVFLVFQEM+S GVRPDLRAYNAL+N+CA +G+  RA+ VV  M   G+  G++PD +T+TSLIKAAA A PP+V EAEEIFA MQQRTNHF+TF  PTE TY+H+M A++ A    RAL++W + L  G      +APG RS+  A+ AC   GD+  AL+VY  M+  G+R ++R+LL LV LC A G   +A+RI RERS     T  R
Sbjct:  866 DNANPALDNLFRVFLVFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQPDAVTYTSLIKAAARAVPPRVEEAEEIFATMQQRTNHFSTFARPTEVTYAHLMRASVMAEDYGRALEIWRQQLSAG------VAPGPRSTRAALAACGGAGDVDTALQVYDVMREGGIRPNSRALLDLVNLCRANGLQSVAARIMRERSKTDATTNRR 1082          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A836CEM1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM1_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.080e-63
Identity = 126/217 (58.06%), Postives = 151/217 (69.59%), Query Frame = 0
Query:   19 DPAQDNLFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGDLSAALEVYSAMQTAGVRLDNRSLLALVRLCEAEGHHDIASRIRRERSALPPPTTS 235
            DPA DNLFRVFLVF EMKS GV+PD  AYNALINSCAAVGDL RAM+V+ +M  DE  + PD IT TSLIK AA A     AE  EIFAAMQQRTNHF+TF  P+ERT+ H++ AN+   R  R  +LW +ML       EGLAP  R+ ++ + AC+  GDL+ AL VY  M TAG+R DNRSLL+LVRLCE+ G  D A  I R+RS+L    +S
Sbjct:  654 DPAADNLFRVFLVFGEMKSQGVQPDRPAYNALINSCAAVGDLERAMAVLRQMYEDEHCLPPDAITFTSLIKTAAAAHNADAAE--EIFAAMQQRTNHFSTFHRPSERTFRHMITANMNIKRFSRVQELWAQML------AEGLAPSSRTCSLVLGACRHQGDLTQALSVYGVMNTAGIRPDNRSLLSLVRLCESAGMADKARDIIRDRSSLEHKNSS 862          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A0G4F8K7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F8K7_VITBC)

HSP 1 Score: 120 bits (302), Expect = 1.500e-27
Identity = 76/208 (36.54%), Postives = 109/208 (52.40%), Query Frame = 0
Query:   22 QDNLFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGDLSAALEVYSAMQTAGVRLDNRSLLALVRLCEAEGHHDIASRIRRERSAL 229
            ++NLFR+FLVFQEM+S+GV+PDL AYN L+++C   G++ +AM V                                         AMQQRTNHFA+   P+E T+  +M AN  A R  R  +L+  M         G+ P  R+  +AI    ++  +  AL++Y  +    VRLDNRSL AL+ L   +G HD+ASRIR++RS +
Sbjct:  641 RENLFRIFLVFQEMQSSGVQPDLCAYNTLLDACGRAGEVEKAMEVXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXTAMQQRTNHFASCVLPSELTFKQLMLANRNAYRLRRVFELFDMMQRQ-----HGIRPTLRTGAIAIQLACEVKQVERALDIYRTLTANRVRLDNRSLHALLSLLNEKGLHDMASRIRQQRSLM 839          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A7S4F7G9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F7G9_CHRCT)

HSP 1 Score: 98.6 bits (244), Expect = 3.180e-22
Identity = 57/133 (42.86%), Postives = 76/133 (57.14%), Query Frame = 0
Query:   99 VAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGD----LSAALEVYSAMQTAGVRLDNRSLLALVRLCEAEGHHDIASRIRRERS 227
            VA+AE I+  M QRTNHF T+  P+   Y+H+M AN +A    R L+L  EM         GL+P     + A+ AC+        L+  L +Y  M +  VRLDN+ +LAL RLCEA+G H  A RIR+ERS
Sbjct:    7 VAQAERIWLEMGQRTNHFTTYTPPSTHCYAHLMTANRKASNITRVLELLDEM------QARGLSPTAAHFSTALQACEAFSHVPRALTLGLALYDKMVSRAVRLDNKGMLALTRLCEAQGEHQTARRIRQERS 133          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A7S0XEC2_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XEC2_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.580e-21
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 0
Query:   22 QDNLFRVFLVFQEMK-SAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAA-NARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVM 131
            +D+LFR++LVFQEMK +  ++ D   YN LIN+CA VGD+ RA+  +  M   E G+EP+VIT+TSLIKA A N+R   +  AE IF  MQQR+NHF+ +  P E TY  +M
Sbjct:  172 RDDLFRLYLVFQEMKYNPAIQLDTAVYNTLINACAGVGDIDRALETMTAM--QENGIEPNVITYTSLIKACAFNSRNEMIELAENIFNEMQQRSNHFSNYIQPNEMTYEKLM 281          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A7S0Q6N5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q6N5_9EUKA)

HSP 1 Score: 77.8 bits (190), Expect = 1.790e-14
Identity = 50/137 (36.50%), Postives = 77/137 (56.20%), Query Frame = 0
Query:   75 AGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEGLAPGHRSSTVAIHACQDLGDL----SAALEVYSAMQTAGVRLDNRSLLALV 207
            AG+ PDVI+++SL+KA A A   + AE   I+  M QRTNHF+++  P+  TY H+M+A  R G   R L+L  +++         LAP     ++A+ +      L      AL++Y  M+  G+R+DNR LL L+
Sbjct:    9 AGLRPDVISYSSLLKACAVAGDVECAE--RIWVEMGQRTNHFSSYVPPSSYTYYHLMSAQRRVGNASRELELLEQLVE------RRLAPTTGHYSLALQSLSRYSQLPLSLDRALQLYEDMRVRGLRMDNRGLLPLL 137          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A7S0HTE0_9EUKA (Hypothetical protein (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HTE0_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 6.880e-13
Identity = 44/86 (51.16%), Postives = 54/86 (62.79%), Query Frame = 0
Query:   75 AGVEPDVITHTSLIKAAANARPPKVAEAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEMLHVGGPDGEG 160
            AG+ PDVI++TSLIKA A       A A+EIF  MQQRTNH +TF  P+ERT+ H+MA +L A    R L L  E+  V   D EG
Sbjct:   11 AGLTPDVISYTSLIKACAATGGEGAARADEIFNEMQQRTNHVSTFTPPSERTFRHLMAVHLAANSTGRVLALLGELRAVDDADAEG 96          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A8J9SCF5_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SCF5_PHATR)

HSP 1 Score: 62.8 bits (151), Expect = 5.220e-8
Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 0
Query:   25 LFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVAEA----EEIFAAMQQRTNHFATFQAPTERTYSHVMAANLR 136
            L +VFLVFQEMK+AG  PD+  YNAL+ +CA  GD  RA  V+ +M   +  + P+  +   L++AAA      +AE+      ++   ++ T+   T   PT ++++ ++A+ +R
Sbjct:   51 LLKVFLVFQEMKTAGAEPDVACYNALLRACARAGDFVRAQDVLAQMQATD--LSPNDNSWRELLRAAAKIGRSDLAESIWRQALVYGNRRRYTDDPETKWMPTLKSFAALVASYMR 164          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: B7G7P3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7P3_PHATC)

HSP 1 Score: 63.2 bits (152), Expect = 7.400e-8
Identity = 39/116 (33.62%), Postives = 67/116 (57.76%), Query Frame = 0
Query:   25 LFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVAEA----EEIFAAMQQRTNHFATFQAPTERTYSHVMAANLR 136
            L +VFLVFQEMK+AG  PD+  YNAL+ +CA  GD  RA  V+ +M   +  + P+  +   L++AAA      +AE+      ++   ++ T+   T   PT ++++ ++A+ +R
Sbjct:  258 LLKVFLVFQEMKTAGAEPDVACYNALLRACARAGDFVRAQDVLAQMQATD--LSPNDNSWRELLRAAAKIGRSDLAESIWRQALVYGNRRRYTDEPETKWMPTLKSFAALVASYMR 371          
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Match: A0A1Z5J6M2_FISSO (PPR_long domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6M2_FISSO)

HSP 1 Score: 59.7 bits (143), Expect = 1.280e-6
Identity = 34/70 (48.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query:   23 DNLFRVFLVFQEMKSAGVRPDLRAYNALINSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAA 92
            D L +VFLVFQEMK+AG  PDL  YNAL+ +CA  GDL  A  V+ +M    A + P+  +   L++AAA
Sbjct:  558 DVLVKVFLVFQEMKTAGTMPDLACYNALLRACARAGDLDHANDVLRQMVA--ADLCPNDTSWRQLLQAAA 625          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20505.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LSJ6_ECTSI1.820e-6454.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEM1_9STRA1.080e-6358.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4F8K7_VITBC1.500e-2736.54Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S4F7G9_CHRCT3.180e-2242.86Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0XEC2_9STRA2.580e-2150.89Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A7S0Q6N5_9EUKA1.790e-1436.50Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S0HTE0_9EUKA6.880e-1351.16Hypothetical protein (Fragment) n=2 Tax=Phaeocysti... [more]
A0A8J9SCF5_PHATR5.220e-833.62Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
B7G7P3_PHATC7.400e-833.62Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5J6M2_FISSO1.280e-648.57PPR_long domain-containing protein n=2 Tax=Fistuli... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 95..217
e-value: 8.0E-7
score: 28.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 21..75
e-value: 3.4E-9
score: 38.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 97..239
e-value: 1.6E-19
score: 72.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 42..91
e-value: 1.6E-8
score: 34.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 46..80
e-value: 3.0E-5
score: 21.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 80..112
score: 7.289
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 43..77
score: 8.977
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 164..198
score: 7.267
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 123..157
score: 8.418
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 31..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:848478..855497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20505.1mRNA_S-ischiensis_contig9.20505.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 848478..855497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20505.1 ID=prot_S-ischiensis_contig9.20505.1|Name=mRNA_S-ischiensis_contig9.20505.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=245bp
QALSSAGEGAGAAAAERADPAQDNLFRVFLVFQEMKSAGVRPDLRAYNAL
INSCAAVGDLARAMSVVEEMAGDEAGVEPDVITHTSLIKAAANARPPKVA
EAEEIFAAMQQRTNHFATFQAPTERTYSHVMAANLRAGRPERALDLWTEM
LHVGGPDGEGLAPGHRSSTVAIHACQDLGDLSAALEVYSAMQTAGVRLDN
RSLLALVRLCEAEGHHDIASRIRRERSALPPPTTSRTKAADIHFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat