prot_S-ischiensis_contig9.20454.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20454.1
Unique Nameprot_S-ischiensis_contig9.20454.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length200
Homology
BLAST of mRNA_S-ischiensis_contig9.20454.1 vs. uniprot
Match: A0A177EKF3_9MICR (DNA polymerase n=1 Tax=Nematocida displodere TaxID=1805483 RepID=A0A177EKF3_9MICR)

HSP 1 Score: 58.5 bits (140), Expect = 1.390e-6
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 0
Query:  126 FATEASMLVAWRDWVVTEVDPDILAGFDLVGFDVRYLLARFKALGLSPDLRLSRHTGP 183
            F TEA +L+AW  WVV+ +DPD++ G+++ GFD  YLL R +ALGL       R T P
Sbjct:  257 FETEAELLMAWSRWVVS-IDPDVITGWNISGFDFPYLLGRAEALGLPEFKHFGRTTAP 313          
BLAST of mRNA_S-ischiensis_contig9.20454.1 vs. uniprot
Match: L8HIY3_ACACA (DNA polymerase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HIY3_ACACA)

HSP 1 Score: 55.8 bits (133), Expect = 1.150e-5
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  123 VRWFATEASMLVAWRDWVVTEVDPDILAGFDLVGFDVRYLLARFKALGL 171
            VR + TEA ML+AWR +V   VDPDIL G++++ FD+ YLL R + LGL
Sbjct:  257 VRCYRTEAEMLLAWRKFVEI-VDPDILTGYNIINFDIWYLLTRAQKLGL 304          
BLAST of mRNA_S-ischiensis_contig9.20454.1 vs. uniprot
Match: A0A0L0DSH2_THETB (DNA polymerase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSH2_THETB)

HSP 1 Score: 55.5 bits (132), Expect = 1.590e-5
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:  122 RVRWFATEASMLVAWRDWVVTEVDPDILAGFDLVGFDVRYLLARFKALGL 171
            +V  F TE  +L AWR++VV E DPDIL G+++V FD+ YLL R  ALGL
Sbjct:  375 QVMSFRTERELLEAWREFVV-ETDPDILTGYNIVNFDLPYLLERAAALGL 423          
BLAST of mRNA_S-ischiensis_contig9.20454.1 vs. uniprot
Match: A0A7S1HD78_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HD78_HEMAN)

HSP 1 Score: 53.5 bits (127), Expect = 3.010e-5
Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  123 VRWFATEASMLVAWRDWVVTEVDPDILAGFDLVGFDVRYLLARFKAL 169
            V  F +E  ML AWR++VV   DPDIL G+++VGFD+ YL+ R KAL
Sbjct:   75 VHSFDSEVEMLKAWREFVVA-TDPDILTGYNIVGFDIPYLINRAKAL 120          
BLAST of mRNA_S-ischiensis_contig9.20454.1 vs. uniprot
Match: A0A6G6XPA9_9VIRU (DNA-directed DNA polymerase n=1 Tax=Dishui Lake large algae virus 1 TaxID=2704073 RepID=A0A6G6XPA9_9VIRU)

HSP 1 Score: 53.9 bits (128), Expect = 5.120e-5
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  123 VRWFATEASMLVAWRDWVVTEVDPDILAGFDLVGFDVRYLLARFKALGL 171
            V ++ TE  ML AW+ +V+T +DPDIL G+++ GFD+RY+  R + LG+
Sbjct:  457 VEYYDTEEEMLDAWK-YVITRLDPDILTGYNIFGFDMRYIWERVRELGM 504          
BLAST of mRNA_S-ischiensis_contig9.20454.1 vs. uniprot
Match: L1JTX0_GUITC (DNA polymerase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JTX0_GUITC)

HSP 1 Score: 53.5 bits (127), Expect = 6.960e-5
Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 0
Query:  111 TLLAGPGLGQLRVRWFATEASMLVAWRDWVVTEVDPDILAGFDLVGFDVRYLLARFKAL 169
            TL +   +    V  F  E+ ML  WRD+V+   DPDIL G+++VGFD+ YL+ R KAL
Sbjct:  232 TLKSCAAISGAEVHSFEDESEMLQGWRDFVIA-CDPDILTGYNIVGFDIPYLMDRAKAL 289          
BLAST of mRNA_S-ischiensis_contig9.20454.1 vs. uniprot
Match: A0A8H6YT63_9AGAR (DNA polymerase n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6YT63_9AGAR)

HSP 1 Score: 53.1 bits (126), Expect = 7.990e-5
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0
Query:  126 FATEASMLVAWRDWVVTEVDPDILAGFDLVGFDVRYLLARFKAL 169
            FA EA++L +W D+V  EVDPD++ G+++ GFD  YLLAR KAL
Sbjct:  271 FADEANLLQSWSDFV-QEVDPDLIIGYNITGFDFPYLLARAKAL 313          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A177EKF3_9MICR1.390e-648.28DNA polymerase n=1 Tax=Nematocida displodere TaxID... [more]
L8HIY3_ACACA1.150e-555.10DNA polymerase n=1 Tax=Acanthamoeba castellanii st... [more]
A0A0L0DSH2_THETB1.590e-556.00DNA polymerase n=1 Tax=Thecamonas trahens ATCC 500... [more]
A0A7S1HD78_HEMAN3.010e-555.32Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6G6XPA9_9VIRU5.120e-546.94DNA-directed DNA polymerase n=1 Tax=Dishui Lake la... [more]
L1JTX0_GUITC6.960e-545.76DNA polymerase n=2 Tax=Guillardia theta TaxID=5552... [more]
A0A8H6YT63_9AGAR7.990e-556.82DNA polymerase n=1 Tax=Mycena venus TaxID=2733690 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 107..199
e-value: 6.5E-13
score: 50.8
IPR006133DNA-directed DNA polymerase, family B, exonuclease domainPFAMPF03104DNA_pol_B_exo1coord: 120..171
e-value: 5.9E-8
score: 32.2
NoneNo IPR availablePANTHERPTHR10322DNA POLYMERASE CATALYTIC SUBUNITcoord: 70..173
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 118..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:524157..525671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20454.1mRNA_S-ischiensis_contig9.20454.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 524157..525671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20454.1 ID=prot_S-ischiensis_contig9.20454.1|Name=mRNA_S-ischiensis_contig9.20454.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=200bp
VPTASPGASDGTGGASGGSPSGSGIVFTTLPCSCVAPALATAPASAPATT
ASESQATSTTTTSSRAASGAWAPPMSRAQDQPQARLESPSQPQAASPLPA
VGARARVRAGTLLAGPGLGQLRVRWFATEASMLVAWRDWVVTEVDPDILA
GFDLVGFDVRYLLARFKALGLSPDLRLSRHTGPTPTPHSSSSAASPSSSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR006133DNA-dir_DNA_pol_B_exonuc
IPR012337RNaseH-like_sf