prot_S-ischiensis_contig9.20442.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20442.1
Unique Nameprot_S-ischiensis_contig9.20442.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length194
Homology
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: D8LN85_ECTSI (Histone deacetylase superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN85_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 6.340e-26
Identity = 74/153 (48.37%), Postives = 85/153 (55.56%), Query Frame = 0
Query:   40 GTGGHHPERVLLEQAHGKKFLVRMAARGPGPWALAVGSARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDILCRTLDPSFLH 192
            G+GG   E+  L QAH ++FL  M+A G   W  A  SA  V   V  VLSGR  NA C +E PGRHA              P    S   G G   L+ E   CAVN+VAVGALYA  QWS+ RVAVVD     A GT DILCRTLDP+FL+
Sbjct: 1305 GSGGD--EKRYLAQAHTQEFLAHMSAMGRQEWGAASASAACVVRGVSAVLSGRCTNALCLLENPGRHA--------------PSGGYSVGHGCGVPKLK-EGACCAVNSVAVGALYAHMQWSVGRVAVVDFGTHLATGTADILCRTLDPAFLY 1440          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: A0A7S2SRP9_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRP9_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 1.280e-11
Identity = 49/114 (42.98%), Postives = 67/114 (58.77%), Query Frame = 0
Query:   77 SARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQW--SLCRVAVVDMDALPAAGTQDILCRTLDP 188
            +A +V EAVD V SG+ARNAFCA+  PG HA        LRG++  E+   A G +G          C +NNVA+GA YA+H W  ++ +VA+VD D     GT+D++ R L P
Sbjct:   51 AAGVVCEAVDRVCSGKARNAFCAIRPPGHHAG-------LRGVV--ESGDDAHGSSGF---------CLLNNVAIGAAYAKHMWRGTVQKVAIVDFDVHHGNGTEDVV-RNLVP 145          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: H3KEJ4_9BURK (Histone deacetylase family protein n=1 Tax=Sutterella parvirubra YIT 11816 TaxID=762967 RepID=H3KEJ4_9BURK)

HSP 1 Score: 69.7 bits (169), Expect = 9.930e-11
Identity = 51/127 (40.16%), Postives = 60/127 (47.24%), Query Frame = 0
Query:   67 GPGPWALAVGSARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDILCRTLDPSFLHI 193
            GPG +  A+ S   V  AVD V S   RNAFCAV  PG HA  A A                 GG            C +NNVAVGALYAR +W + RVAV+D D     GT++IL       FL +
Sbjct:  101 GPGTFDAAMRSVGAVVAAVDAVFSRTCRNAFCAVRPPGHHAGRARA-----------------GGF-----------CFLNNVAVGALYARARWGVERVAVLDFDVHHGDGTEEILAGREGVKFLSL 199          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: A0A6N6VHY3_9HYPH (Histone deacetylase family protein n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VHY3_9HYPH)

HSP 1 Score: 68.9 bits (167), Expect = 1.730e-10
Identity = 49/127 (38.58%), Postives = 59/127 (46.46%), Query Frame = 0
Query:   68 PGPWALAVGSARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDILCRTLDPSFLHIS 194
            PG    A+ +A  V  AVD V+SGR RNAFCA+  PG HA+      R  G                         C  NNVA+GAL+ARH   L R+AVVD D     GTQ   C   DP+  + S
Sbjct:   87 PGSVEAALRAAGAVTFAVDEVMSGRVRNAFCAIRPPGHHAEP----DRAMGF------------------------CFFNNVAIGALHARHVHGLSRIAVVDFDVHHGNGTQ--ACFETDPNLFYAS 183          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: UPI001C9E5F87 (histone deacetylase family protein n=1 Tax=Chitinolyticbacter meiyuanensis TaxID=682798 RepID=UPI001C9E5F87)

HSP 1 Score: 68.9 bits (167), Expect = 1.750e-10
Identity = 43/101 (42.57%), Postives = 50/101 (49.50%), Query Frame = 0
Query:   84 AVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDILCR 184
            AVDLV+SGRARNAFCAV  PG HA+    H +  G                         C +NNVAV   +A  Q  + RVAVVD D     GT+DI CR
Sbjct:  108 AVDLVMSGRARNAFCAVRPPGHHAE----HDKAMGF------------------------CLINNVAVAVAHAIEQHGMQRVAVVDFDVHHGNGTEDIFCR 180          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: A0A2U1VDK3_9PROT (Acetoin utilization protein n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1VDK3_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 8.350e-10
Identity = 52/121 (42.98%), Postives = 59/121 (48.76%), Query Frame = 0
Query:   74 AVGSARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDILCRTLDPSFLHIS 194
            A+ +A  V  AVDLV SGR+RNAFCAV  PG HA+ A A     G                         C  NNVAVGAL+AR    L RVAV+D D     GTQDI     DP  L+ S
Sbjct:   93 ALRAAGAVCAAVDLVASGRSRNAFCAVRPPGHHAERAKA----MGF------------------------CLFNNVAVGALHARAVHGLQRVAVMDFDVHHGNGTQDIFQD--DPDLLYCS 183          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: Q02CA3_SOLUE (Histone deacetylase superfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) TaxID=234267 RepID=Q02CA3_SOLUE)

HSP 1 Score: 66.2 bits (160), Expect = 1.590e-9
Identity = 46/117 (39.32%), Postives = 59/117 (50.43%), Query Frame = 0
Query:   68 PGPWALAVGSARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDILCR 184
            P  W +AV ++  V  AVD VL+G ARNAFCAV  PG HA++A      RG+                        C +NNVA+ A YA+ +  + RVA+VD D     GTQDI  R
Sbjct:   88 PNSWDVAVRASGGVLNAVDAVLTGAARNAFCAVRPPGHHANAA------RGMGF----------------------CLLNNVAIAARYAQRRHGIERVAIVDWDVHHGNGTQDIFYR 176          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: A0A840SKM8_9RHOB (Acetoin utilization deacetylase AcuC-like enzyme n=1 Tax=Amaricoccus macauensis TaxID=57001 RepID=A0A840SKM8_9RHOB)

HSP 1 Score: 66.2 bits (160), Expect = 1.590e-9
Identity = 44/116 (37.93%), Postives = 55/116 (47.41%), Query Frame = 0
Query:   67 GPGPWALAVGSARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDIL 182
            GPG    A   A  +  AVDLV+SG  RNAFCAV  PG HA++    +R  G                         C    VA+GAL+A H+  L RVA++D D     GTQD+L
Sbjct:   86 GPGTIRAARRGAGAICRAVDLVMSGEVRNAFCAVRPPGHHAET----ERAMGF------------------------CYFGTVAIGALHAIHEHGLSRVAIMDFDVHHGNGTQDLL 173          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: A0A3M1JND3_9PROT (Histone deacetylase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JND3_9PROT)

HSP 1 Score: 65.9 bits (159), Expect = 2.130e-9
Identity = 51/150 (34.00%), Postives = 65/150 (43.33%), Query Frame = 0
Query:   47 ERVLLEQAHGKKFLVR----MAARG-----------PGPWALAVGSARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDI 181
            ++  LE+ H K ++ R    M A G           P     A+ +A  V  AVD V++G  RNAFCAV  PG HA+      R  G                         C  NNVAVGAL+A H++ L R AVVD D     GTQ +
Sbjct:   51 DKAALERVHAKTYVRRVLSSMPAEGYRRLDPDTVVCPDSGEAALRAAGAVVAAVDAVMAGEVRNAFCAVRPPGHHAEP----DRAMGF------------------------CLFNNVAVGALHAVHRYGLARAAVVDFDVHHGNGTQTV 172          
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Match: A0A7S1I0E1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I0E1_9EUGL)

HSP 1 Score: 65.5 bits (158), Expect = 3.660e-9
Identity = 48/125 (38.40%), Postives = 58/125 (46.40%), Query Frame = 0
Query:   68 PGPWALAVGSARLVAEAVDLVLSGRARNAFCAVETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVAVGALYARHQWSLCRVAVVDMDALPAAGTQDILCRTLDPSFLH 192
            PG W  A+ +A   A+AVDLVL G+ARNAFCAV  PG HA  A      RG+                        C  NN+AV A YA+    + +V +VD D     GTQD      DPS L 
Sbjct:  128 PGTWKAALRAAGAAADAVDLVLGGQARNAFCAVRPPGHHATPA------RGMGF----------------------CVFNNIAVAARYAQRHHGVEKVLIVDWDYHHGNGTQDAFYE--DPSVLQ 222          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN85_ECTSI6.340e-2648.37Histone deacetylase superfamily n=1 Tax=Ectocarpus... [more]
A0A7S2SRP9_9STRA1.280e-1142.98Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
H3KEJ4_9BURK9.930e-1140.16Histone deacetylase family protein n=1 Tax=Suttere... [more]
A0A6N6VHY3_9HYPH1.730e-1038.58Histone deacetylase family protein n=1 Tax=Parviba... [more]
UPI001C9E5F871.750e-1042.57histone deacetylase family protein n=1 Tax=Chitino... [more]
A0A2U1VDK3_9PROT8.350e-1042.98Acetoin utilization protein n=1 Tax=Azospirillum s... [more]
Q02CA3_SOLUE1.590e-939.32Histone deacetylase superfamily n=1 Tax=Solibacter... [more]
A0A840SKM8_9RHOB1.590e-937.93Acetoin utilization deacetylase AcuC-like enzyme n... [more]
A0A3M1JND3_9PROT2.130e-934.00Histone deacetylase family protein n=1 Tax=Alphapr... [more]
A0A7S1I0E1_9EUGL3.660e-938.40Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 71..194
e-value: 3.9E-13
score: 49.6
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 44..194
e-value: 7.4E-17
score: 63.4
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 82..109
NoneNo IPR availablePANTHERPTHR45634:SF8TYPE-2 HISTONE DEACETYLASE 1coord: 82..109
coord: 144..194
NoneNo IPR availablePANTHERPTHR45634FAMILY NOT NAMEDcoord: 144..194
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 66..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:438529..440247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20442.1mRNA_S-ischiensis_contig9.20442.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 438529..440249 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20442.1 ID=prot_S-ischiensis_contig9.20442.1|Name=mRNA_S-ischiensis_contig9.20442.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=194bp
GGGGGGEATSAEVAPPPPPPSATPPPTPPCSVGGPGGGTGTGGHHPERVL
LEQAHGKKFLVRMAARGPGPWALAVGSARLVAEAVDLVLSGRARNAFCAV
ETPGRHADSATAHQRLRGLLAPEAAASAKGGAGTGSLEAEAWPCAVNNVA
VGALYARHQWSLCRVAVVDMDALPAAGTQDILCRTLDPSFLHIS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf
IPR023696Ureohydrolase_dom_sf