prot_S-ischiensis_contig9.20436.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20436.1
Unique Nameprot_S-ischiensis_contig9.20436.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length174
Homology
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BLAST of mRNA_S-ischiensis_contig9.20436.1 vs. uniprot
Match: D8LN86_ECTSI (Similar to DNA (Cytosine-5-)-methyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN86_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 1.670e-28
Identity = 51/87 (58.62%), Postives = 62/87 (71.26%), Query Frame = 0 
Query:   88 TDAAAPPVVTASESERLAAMGVERPSGRHPGYILTLFGKKTRRCRACRGCLSADCMRCRFCKDMPKNGGRGSYKQPCEARRCVWVEY 174
            T    PP     +   LA  G ++P G+HPGYI+TL+GKK RRC  C  C SADC +CR+C DMPK+GGRGSYKQPCEAR+C WVE+
Sbjct:  445 TTGTQPPRFGKQDKALLATHGAKQPKGKHPGYIITLYGKKVRRCGECAPCRSADCGQCRYCVDMPKHGGRGSYKQPCEARKCAWVEF 531
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BLAST of mRNA_S-ischiensis_contig9.20436.1 vs. uniprot
Match: UPI001652AECD (uncharacterized protein LOC101846617 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI001652AECD)

HSP 1 Score: 57.0 bits (136), Expect = 2.820e-6
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0 
Query:  124 FGKKTRRCRACRGCLSADCMRCRFCKDMPKNGGRGSYKQPCEARRCVW 171
             GK+ RRC+ C+GCL+ +C  C FCKD PK GG G  K+ C    C++
Sbjct: 1189 LGKRKRRCKECKGCLTPECGNCVFCKDKPKFGGPGKMKKSCIHSTCLF 1236
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BLAST of mRNA_S-ischiensis_contig9.20436.1 vs. uniprot
Match: A0A553P9S0_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P9S0_TIGCA)

HSP 1 Score: 54.3 bits (129), Expect = 2.160e-5
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:  125 GKKTR-RCRACRGCLSADCMRCRFCKDMPKNGGRGSYKQPCEARRCV 170
            GKK R  C+ C+ C+S DC  C +C DMP+ GG G  + PC+ R+C+
Sbjct:  499 GKKDRVPCKICQACISPDCGMCSYCSDMPRFGGPGRMRHPCQMRQCL 545
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BLAST of mRNA_S-ischiensis_contig9.20436.1 vs. uniprot
Match: A0A553PJD9_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PJD9_TIGCA)

HSP 1 Score: 52.8 bits (125), Expect = 7.890e-5
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 0 
Query:  126 KKTRRCRACRGCLSADCMRCRFCKDMPKNGGRGSYKQPCEARRC 169
            K+T  C+ C  C+  DCMRC +C D  K+GG+G+ K+ C  R+C
Sbjct:  915 KRTVACKKCENCVKKDCMRCMYCLDRKKHGGKGNLKKVCLERKC 958
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LN86_ECTSI1.670e-2858.62Similar to DNA (Cytosine-5-)-methyltransferase (Pa... [more]
UPI001652AECD2.820e-647.92uncharacterized protein LOC101846617 n=1 Tax=Aplys... [more]
A0A553P9S0_TIGCA2.160e-546.81Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
A0A553PJD9_TIGCA7.890e-545.45Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002857Zinc finger, CXXC-typePFAMPF02008zf-CXXCcoord: 126..169
e-value: 3.1E-9
score: 36.7
IPR002857Zinc finger, CXXC-typePROSITEPS51058ZF_CXXCcoord: 123..170
score: 11.303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:426570..427398 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20436.1mRNA_S-ischiensis_contig9.20436.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 426570..427398 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20436.1 ID=prot_S-ischiensis_contig9.20436.1|Name=mRNA_S-ischiensis_contig9.20436.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=174bp
MLGDGGHPNRLNLEPDGGSPDAFLARRRGASFGASLRPGAASRPAKTKSR
ARGKATRAGGKGGGGGSAGTGRKRGGGGGGEGDKWDGTDAAAPPVVTASE
SERLAAMGVERPSGRHPGYILTLFGKKTRRCRACRGCLSADCMRCRFCKD
MPKNGGRGSYKQPCEARRCVWVEY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002857Znf_CXXC