prot_S-ischiensis_contig9.20428.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20428.1
Unique Nameprot_S-ischiensis_contig9.20428.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length168
Homology
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: D7G064_ECTSI (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G064_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.680e-31
Identity = 69/131 (52.67%), Postives = 81/131 (61.83%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARA--------------------GRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILSRARAASFSSSS 111
            MLL LCSELHKHLRPR++HGTDMDTLCE+V VIREEIVE+  G    +                        +AAIE +L KLVQDSQE+LIY A K+IQD+I  F P PE LDYP +L RA     +  S
Sbjct:  501 MLLQLCSELHKHLRPRVYHGTDMDTLCELVSVIREEIVEEQRGRHGLSQINPVATAAXXXXXXXXXXXXXXXEAAIETILMKLVQDSQERLIYMATKVIQDDIASFRPTPEDLDYPGMLLRAAKGGGTGDS 631          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: A0A0P1A602_PLAHL (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A602_PLAHL)

HSP 1 Score: 90.1 bits (222), Expect = 6.980e-18
Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILSRARAASFSSSSAPLPS 116
            ++  LC  L+  +RPR+    D++ LCE++ V+R E++E       RA  V  A  E V+ +++QD+QE+LI C  K I+DEIEGF P PEHL+YPA L  A  +  S  +   PS
Sbjct:  404 LIFQLCGVLYNTVRPRLLAQKDLEVLCEVIQVLRSEVIE--AAITPRAALVSYA--EPVMHRMIQDAQERLILCMQKYIRDEIEGFEPCPEHLNYPAKLIAAEESGASLYATWYPS 515          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: A0A835R0E1_VANPL (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R0E1_VANPL)

HSP 1 Score: 80.9 bits (198), Expect = 1.290e-16
Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    5 LCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILSR-ARAASFSSSS 111
            LC+ L+  LRP++ +  ++D+LCE+V ++R E++ D    R  +     A +  +LQK++ D  E+L +CA   I+DEI    P  E +DYPA+L + A  AS +SSS
Sbjct:   13 LCTYLYDILRPKLIYQANLDSLCELVDILRVEVIADQLNRRGES----LAGLRPILQKILADINERLTFCARTYIRDEIANHRPSDEEVDYPAMLEKNAEQASQTSSS 116          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: H3GZE6_PHYRM (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZE6_PHYRM)

HSP 1 Score: 85.1 bits (209), Expect = 3.860e-16
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILSRARAASFSSSSAPLPS 116
            ++  L   L+  +RP++    D++ LCE++ V+R E++E       RA  VG A  E V+ +++QD+QE+LI C  K I+DEIEGF P P  LDYPA L  A  A  S  +   PS
Sbjct:  412 LIFQLSGLLYNTVRPQLLAQKDLEVLCEVIQVLRSEVIE--AAITPRAALVGYA--EPVMHRMIQDAQERLILCMQKYIRDEIEGFVPTPADLDYPAKLVAAEQAGASLYATWYPS 523          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: V9ED87_PHYPR (Conserved oligomeric Golgi complex subunit 3 n=11 Tax=Phytophthora TaxID=4783 RepID=V9ED87_PHYPR)

HSP 1 Score: 82.8 bits (203), Expect = 2.470e-15
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILSRARAASFSSSSAPLPS 116
            ++  L   L+  +RP+     D++ LCE++ V+R E++E       R   VG A  E V+ +++QD+QE+LI C  K I+DEIEGF P P  LDYPA L  A  A  S  +   PS
Sbjct:  447 LIFQLSGLLYNTVRPQFLAQKDLEVLCEVIQVLRSEVIE--AAITPRVALVGYA--EPVMHRMIQDAQERLILCMQKYIRDEIEGFVPTPADLDYPAKLVAAEQAGASLYATWYPS 558          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: D0NUH9_PHYIT (Conserved oligomeric Golgi complex subunit 3 n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NUH9_PHYIT)

HSP 1 Score: 82.8 bits (203), Expect = 2.490e-15
Identity = 46/116 (39.66%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILSRARAASFSSSSAPLPS 116
            ++  L   L+  +RP+     D++ LCE++ V+R E++E       RA  VG A  E V+ +++QD+QE+LI C  K I+DEI+GF P P  LDYPA L  A  A  S  +   PS
Sbjct:  537 LIFQLSGLLYNTVRPQFIAQKDLEVLCEVIQVLRSEVIE--AAITPRAALVGYA--EPVMHRMIQDAQERLILCMQKYIRDEIKGFAPSPADLDYPAKLVAAEQAGASLYATWYPS 648          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: A0A7S2G5Q8_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G5Q8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.340e-15
Identity = 43/107 (40.19%), Postives = 64/107 (59.81%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEI------VEDHYGAR-----ARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYP 96
            ML+ LC+ ++  +RP + H TD+DTLC+ VG +REE+       +D  G+      A        A+  +L +LV D+QE+LIYC + LI++E+E FTP    LDYP
Sbjct:   59 MLVELCNTMYGAMRPFLIHQTDLDTLCQTVGTLREELGTDEEFKDDDVGSNPGDDSAAITSSPDCAVRIILTRLVADAQERLIYCTLVLIREELEDFTPSASALDYP 165          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: F0WR10_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WR10_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.550e-15
Identity = 40/107 (37.38%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILSRARAASF 107
            +++   + L+  +RPR+    D+DTLCE++ +++ EI E    +R +        IE VL +L++D+QE+L +C  K + DEIEGFTP P+ L+YP  L+  R  S 
Sbjct:  410 LIIQFSNILYNLMRPRILEQCDLDTLCEVIEILQTEIHETMLASRHKISPY----IEPVLDRLIEDAQERLTFCVQKYLCDEIEGFTPTPQDLNYPERLTETRDVSM 512          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: K3WNE7_GLOUD (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNE7_GLOUD)

HSP 1 Score: 81.6 bits (200), Expect = 6.270e-15
Identity = 42/109 (38.53%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILSRARAASFSS 109
            M+  L   L+  +RP+M    D++ LCE++ V++ E++E     + RA  VG   +E V+ +++QD+QE+LI C  K I+DEIEGFTP    LDYP  L    A+ +++
Sbjct:  476 MIFQLSGLLYSVVRPQMIQQKDLEVLCEIIQVLKSEVIESIV--QPRAAVVG--FVEPVMHRMIQDAQERLILCMQKYIRDEIEGFTPEAADLDYPNKLMNPSASMYAT 580          
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Match: A0A485KLI5_9STRA (Conserved oligomeric Golgi complex subunit 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLI5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.100e-14
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 0
Query:    1 MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGRVGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYP 96
            ++  L + L+  +RPRM    +++ LCE++ V+R E+VE H   R  A      A+E V++++V D+QE+LI C  K I+DEIE F P P  L+YP
Sbjct:  367 LIFQLSATLYHTVRPRMIQQHNLEMLCEIIEVLRSEVVETHIRPRGAAAE----ALEPVVERMVGDAQERLILCTQKFIRDEIEEFVPTPADLNYP 458          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G064_ECTSI2.680e-3152.67Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A0P1A602_PLAHL6.980e-1841.38Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A835R0E1_VANPL1.290e-1637.96Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
H3GZE6_PHYRM3.860e-1640.52Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
V9ED87_PHYPR2.470e-1539.66Conserved oligomeric Golgi complex subunit 3 n=11 ... [more]
D0NUH9_PHYIT2.490e-1539.66Conserved oligomeric Golgi complex subunit 3 n=3 T... [more]
A0A7S2G5Q8_9STRA3.340e-1540.19Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
F0WR10_9STRA4.550e-1537.38Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
K3WNE7_GLOUD6.270e-1538.53Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]
A0A485KLI5_9STRA2.100e-1440.63Conserved oligomeric Golgi complex subunit 3 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007265Conserved oligomeric Golgi complex, subunit 3PANTHERPTHR13302CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3coord: 2..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:402020..406179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20428.1mRNA_S-ischiensis_contig9.20428.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 394589..409015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20428.1 ID=prot_S-ischiensis_contig9.20428.1|Name=mRNA_S-ischiensis_contig9.20428.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=168bp
MLLVLCSELHKHLRPRMFHGTDMDTLCEMVGVIREEIVEDHYGARARAGR
VGQAAIEGVLQKLVQDSQEKLIYCAVKLIQDEIEGFTPRPEHLDYPAILS
RARAASFSSSSAPLPSRPGGVIARRGGRLCHRRRCRRRLLLRHVVPAAAL
HAPCSEQGVPRGGRGGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007265COG_su3