prot_S-ischiensis_contig9.20391.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig9.20391.1
Unique Nameprot_S-ischiensis_contig9.20391.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length101
Homology
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 2.600e-36
Identity = 68/100 (68.00%), Postives = 77/100 (77.00%), Query Frame = 0
Query:    2 DSRWEVGPADVAGRRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            DS W V  +DVAGRR+LR  R  SVDPPGCQDIDDAMH++  P G      + E+GVHIADVTRFV+A +PLDREARAR TTVYL H R+DMLP LLSSD
Sbjct:  557 DSGWRVQESDVAGRRDLRKERAMSVDPPGCQDIDDAMHVKRKPNG------KLEIGVHIADVTRFVEADSPLDREARARATTVYLVHRRIDMLPALLSSD 650          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: A0A836CJZ0_9STRA (DIS3-like exonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ0_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.930e-32
Identity = 68/103 (66.02%), Postives = 75/103 (72.82%), Query Frame = 0
Query:    2 DSRWEVGPADVAGRRELRH--LRVFSVDPPGCQDIDDAMHIRELPRGSGSGG-RRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            DS W V   D   R++LR    RVFSVDPPGCQDIDDAMH+RE+    GSG  RR EVGVHIADV RFV  G+PLDREAR RGTT YL+H R DMLP LL+ D
Sbjct:   84 DSGWTVPEEDSTARKDLRGGGYRVFSVDPPGCQDIDDAMHVREI---GGSGMVRRLEVGVHIADVARFVAHGSPLDREARQRGTTTYLSHRRFDMLPALLAGD 183          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: A0A6H5JSW4_9PHAE (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW4_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.500e-31
Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 0
Query:   13 AGRRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            A RR+LR  R  SVDPPGCQDIDDAMH++  P G      + E+GVHIADVTRFV+A +PLDREARAR TTVYL H R+DMLP LLSSD
Sbjct:  162 APRRDLRRERAMSVDPPGCQDIDDAMHVKRKPNG------KLEIGVHIADVTRFVEADSPLDREARARATTVYLVHRRIDMLPALLSSD 244          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: A0A3Q2Z4C4_HIPCM (Exosome complex exonuclease RRP44-like n=1 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2Z4C4_HIPCM)

HSP 1 Score: 123 bits (309), Expect = 6.800e-31
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    5 WEVGPADVAGRRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            W + P D+ GR +LRHL V SVDPPGC DIDDA+H REL  G+      FEVGVHIADVT F++ G  LD+EA  RGTTVYL   R+DM+P LLSS+
Sbjct:  431 WSIKPEDIVGREDLRHLTVCSVDPPGCTDIDDALHCRELANGN------FEVGVHIADVTHFIRPGNALDKEAANRGTTVYLCGKRIDMVPELLSSN 521          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: A0A453J2J3_AEGTS (RNB domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453J2J3_AEGTS)

HSP 1 Score: 119 bits (299), Expect = 6.900e-31
Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    5 WEVGPADVAG--RRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            W + P DVA   R++LRH+RVFSVDPPGC+DIDDA+H   LP G+      FEVGVHIADVT FV  GTPLD EA  R T+VYL   R+DMLP  L+ D
Sbjct:  192 WTLSPEDVANPNRQDLRHVRVFSVDPPGCRDIDDALHCTPLPNGN------FEVGVHIADVTNFVHPGTPLDEEASQRATSVYLVGQRIDMLPKPLTED 284          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: A0A6P4A3C1_ZIZJJ (exosome complex exonuclease RRP44 homolog A isoform X2 n=15 Tax=rosids TaxID=71275 RepID=A0A6P4A3C1_ZIZJJ)

HSP 1 Score: 124 bits (310), Expect = 8.770e-31
Identity = 61/99 (61.62%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    5 WEVGPADVAG--RRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            W V P D+    R++LRHLRVFSVDPPGC+DIDDA+H   LP G+      FEVGVHIADVT FV+ GTPLD EA  RGT+VYL   R+DMLP  L+ D
Sbjct:  459 WSVSPEDLTNPIRQDLRHLRVFSVDPPGCKDIDDALHCTSLPNGN------FEVGVHIADVTNFVQPGTPLDEEATQRGTSVYLVERRIDMLPKPLTED 551          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: UPI00094EA107 (exosome complex exonuclease RRP44-like n=1 Tax=Hippocampus comes TaxID=109280 RepID=UPI00094EA107)

HSP 1 Score: 123 bits (309), Expect = 1.120e-30
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    5 WEVGPADVAGRRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            W + P D+ GR +LRHL V SVDPPGC DIDDA+H REL  G+      FEVGVHIADVT F++ G  LD+EA  RGTTVYL   R+DM+P LLSS+
Sbjct:  453 WSIKPEDIVGREDLRHLTVCSVDPPGCTDIDDALHCRELANGN------FEVGVHIADVTHFIRPGNALDKEAANRGTTVYLCGKRIDMVPELLSSN 543          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: A0A7S1TQI7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQI7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 1.150e-30
Identity = 57/96 (59.38%), Postives = 71/96 (73.96%), Query Frame = 0
Query:    5 WEVGPADVAGRRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSS 100
            W++ P +  GRR+LRHL + S+DPPGC+DIDDA+H RELP G+      +EVGVHIADVT FVK GTPLD EA  R T+ YL   R+DMLP LL++
Sbjct:  114 WKITPENSVGRRDLRHLPILSIDPPGCKDIDDALHSRELPNGN------WEVGVHIADVTHFVKPGTPLDLEAAKRSTSTYLVDRRLDMLPGLLTT 203          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: A0A3Q3E6N2_HIPCM (Exosome complex exonuclease RRP44-like n=3 Tax=Syngnathidae TaxID=72045 RepID=A0A3Q3E6N2_HIPCM)

HSP 1 Score: 123 bits (309), Expect = 1.190e-30
Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    5 WEVGPADVAGRRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            W + P D+ GR +LRHL V SVDPPGC DIDDA+H REL  G+      FEVGVHIADVT F++ G  LD+EA  RGTTVYL   R+DM+P LLSS+
Sbjct:  442 WSIKPEDIVGREDLRHLTVCSVDPPGCTDIDDALHCRELANGN------FEVGVHIADVTHFIRPGNALDKEAANRGTTVYLCGKRIDMVPELLSSN 532          
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Match: A0A131YT94_RHIAP (Exosome complex exonuclease DIS3/RRP44 n=10 Tax=Ixodidae TaxID=6939 RepID=A0A131YT94_RHIAP)

HSP 1 Score: 123 bits (309), Expect = 1.200e-30
Identity = 59/97 (60.82%), Postives = 72/97 (74.23%), Query Frame = 0
Query:    5 WEVGPADVAGRRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSGGRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSSD 101
            W +GP +  GR++LRHL + SVDPPGC DIDDA+H RELP G+      +EVGVHIADV+ FV+  T LD+EA  RGTTVYL   R+DM+P LLSSD
Sbjct:  448 WTIGPKEEQGRKDLRHLCICSVDPPGCTDIDDALHCRELPSGN------YEVGVHIADVSHFVRPKTALDQEAANRGTTVYLVDQRIDMVPELLSSD 538          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN43_ECTSI2.600e-3668.00DIS3-like exonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
A0A836CJZ0_9STRA1.930e-3266.02DIS3-like exonuclease 1 n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JSW4_9PHAE3.500e-3168.54DIS3-like exonuclease 1 n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3Q2Z4C4_HIPCM6.800e-3160.82Exosome complex exonuclease RRP44-like n=1 Tax=Hip... [more]
A0A453J2J3_AEGTS6.900e-3160.61RNB domain-containing protein n=1 Tax=Aegilops tau... [more]
A0A6P4A3C1_ZIZJJ8.770e-3161.62exosome complex exonuclease RRP44 homolog A isofor... [more]
UPI00094EA1071.120e-3060.82exosome complex exonuclease RRP44-like n=1 Tax=Hip... [more]
A0A7S1TQI7_9STRA1.150e-3059.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A3Q3E6N2_HIPCM1.190e-3060.82Exosome complex exonuclease RRP44-like n=3 Tax=Syn... [more]
A0A131YT94_RHIAP1.200e-3060.82Exosome complex exonuclease DIS3/RRP44 n=10 Tax=Ix... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 15..101
e-value: 1.5E-28
score: 100.1
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 4..101
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:179562..180856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20391.1mRNA_S-ischiensis_contig9.20391.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig9 176933..180856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig9.20391.1 ID=prot_S-ischiensis_contig9.20391.1|Name=mRNA_S-ischiensis_contig9.20391.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=101bp
MDSRWEVGPADVAGRRELRHLRVFSVDPPGCQDIDDAMHIRELPRGSGSG
GRRFEVGVHIADVTRFVKAGTPLDREARARGTTVYLTHTRMDMLPTLLSS
D
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR012340NA-bd_OB-fold