prot_S-ischiensis_contig89.20365.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig89.20365.1
Unique Nameprot_S-ischiensis_contig89.20365.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length100
Homology
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A6H5L1V5_9PHAE (BTP domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V5_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.050e-25
Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    4 SDTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQMREPLSWRDLQAFAFLE 91
            S  FAR +T+QAVAHVC+A+GF  T++G L+ +TDVV+ YVE+M +   ++  RAGRTE N+PDVL   QQMR PLSW +L+ FAF E
Sbjct:   29 SAQFARILTKQAVAHVCVAIGFTATSAGALDCLTDVVQRYVETMAKRTMENTYRAGRTEPNIPDVLQGFQQMRTPLSWTELRDFAFSE 116          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A7S2WV84_9STRA (Transcription initiation factor TFIID subunit 8 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV84_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.180e-14
Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    2 TGSDTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQMR-EPLSWRDLQAFAFLE 91
            T  + F+  V  QA AH+CLALGF+ T    L+T+ DV++HYVE++G  A       GR +V   D++ A++Q+   P++W++L+ FAF E
Sbjct:   58 TSPEYFSHRVCVQAAAHICLALGFERTYPAVLDTIADVIKHYVETIGSHAHAITEHGGRQDVTAIDIIAAMKQLSPHPVNWQELRRFAFNE 148          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A1J6IH49_NICAT (Transcription initiation factor tfiid subunit 8 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A1J6IH49_NICAT)

HSP 1 Score: 62.0 bits (149), Expect = 4.260e-10
Identity = 28/73 (38.36%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    3 GSDTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQM 75
            G D F R+++R AVA +C ++GF+      LE++ DV   Y+  +G+ A+  A  AGRT+ N+ DV+  L+ M
Sbjct:   26 GFDDFGRAISRIAVAQICESIGFESFNESALESLADVAIKYIIDLGKTASSGANLAGRTQCNVFDVIQGLEDM 98          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: UPI000904A0A1 (transcription initiation factor TFIID subunit 8-like n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI000904A0A1)

HSP 1 Score: 62.0 bits (149), Expect = 1.000e-9
Identity = 28/73 (38.36%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    3 GSDTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQM 75
            G D F R+++R AVA +C ++GF+      LE++ DV   Y+  +G+ A+  A  AGRT+ N+ DV+  L+ M
Sbjct:   26 GFDDFGRAISRIAVAQICESIGFESFNESALESLADVAIKYIIDLGKTASSGANLAGRTQCNVFDVIQGLEDM 98          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A6P6G2X3_ZIZJJ (Transcription initiation factor TFIID subunit 8 n=1 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P6G2X3_ZIZJJ)

HSP 1 Score: 63.2 bits (152), Expect = 1.660e-9
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    3 GSDTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQMREP 78
            G D +A+++ + AVA +C   GF       LET++D+   Y  ++G+AA D+A  AGRTE N+ D++  L+ M  P
Sbjct:   22 GGDEYAQAIAKIAVAQICEKEGFQTFQPSALETLSDIAVRYTRNIGKAAHDYANLAGRTECNVFDIIQGLEDMGLP 97          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A2R6Q9L7_ACTCC (Transcription initiation factor TFIID subunit 8 n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6Q9L7_ACTCC)

HSP 1 Score: 62.8 bits (151), Expect = 2.260e-9
Identity = 28/71 (39.44%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    5 DTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQM 75
            D F R+V++ AVA +C  +GF+      LE +T++   Y+  +G+AA+ +AR AGRTE N+ DV+  L+ +
Sbjct:   26 DDFGRAVSKIAVAQICEGVGFETFNESALEALTEITIRYLRDLGKAASFYARLAGRTECNVFDVIQGLEDL 96          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A2K2ATA0_POPTR (Transcription initiation factor TFIID subunit 8 n=3 Tax=Populus TaxID=3689 RepID=A0A2K2ATA0_POPTR)

HSP 1 Score: 62.4 bits (150), Expect = 3.130e-9
Identity = 31/74 (41.89%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    5 DTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQMREP 78
            D FAR++ + AVA +C ++GF       LET+TDV   Y+ ++G+AA   A  AGRTE N+ DV+  L+++  P
Sbjct:   28 DEFARAIGKIAVAQMCESMGFQSFQQSALETLTDVTTWYIRNIGKAAQLCANLAGRTEGNVFDVIQGLEELGLP 101          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A7J7DVL3_TRIWF (Transcription initiation factor TFIID subunit 8 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7DVL3_TRIWF)

HSP 1 Score: 62.0 bits (149), Expect = 4.170e-9
Identity = 28/74 (37.84%), Postives = 45/74 (60.81%), Query Frame = 0
Query:    3 GSDTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQMR 76
            G+D F R+V++ AVA +C ++GF       L+ + D+   Y+   G+AA  +A  AGRTE NL DV+  L+ ++
Sbjct:   20 GADEFGRAVSKVAVAQICQSVGFQGFKESALDALADITIRYLRDQGKAARFNANLAGRTECNLFDVIQGLEDLK 93          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A4U5PTR8_POPAL (Transcription initiation factor TFIID subunit 8 n=1 Tax=Populus alba TaxID=43335 RepID=A0A4U5PTR8_POPAL)

HSP 1 Score: 61.6 bits (148), Expect = 5.550e-9
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 0
Query:    5 DTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQM 75
            D FAR++ + AVA +C  LGF       LE ++DV   Y+ ++G+ A  HA  AGRTE N+ DV+  ++++
Sbjct:   28 DEFARAIAKVAVAQMCETLGFQSFQQSALEKLSDVTTWYIRNIGKTAQFHANLAGRTEGNVFDVIQGMEEL 98          
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Match: A0A5N6P0D6_9ASTR (Transcription initiation factor TFIID subunit 8 n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P0D6_9ASTR)

HSP 1 Score: 61.2 bits (147), Expect = 7.830e-9
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    3 GSDTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRAAADHARRAGRTEVNLPDVLDALQQM 75
            G D F RS+ + AVA +C  LGFD      LE + DV   YV+ +G+    +A  A RTE N+ DV+  L+ +
Sbjct:   20 GVDEFGRSIAKVAVAQICERLGFDSCNDSALEALADVAIRYVKDLGKTVKFYANVANRTECNVFDVIQGLEDL 92          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig89.20365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1V5_9PHAE1.050e-2556.82BTP domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A7S2WV84_9STRA1.180e-1440.66Transcription initiation factor TFIID subunit 8 n=... [more]
A0A1J6IH49_NICAT4.260e-1038.36Transcription initiation factor tfiid subunit 8 n=... [more]
UPI000904A0A11.000e-938.36transcription initiation factor TFIID subunit 8-li... [more]
A0A6P6G2X3_ZIZJJ1.660e-938.16Transcription initiation factor TFIID subunit 8 n=... [more]
A0A2R6Q9L7_ACTCC2.260e-939.44Transcription initiation factor TFIID subunit 8 n=... [more]
A0A2K2ATA0_POPTR3.130e-941.89Transcription initiation factor TFIID subunit 8 n=... [more]
A0A7J7DVL3_TRIWF4.170e-937.84Transcription initiation factor TFIID subunit 8 n=... [more]
A0A4U5PTR8_POPAL5.550e-939.44Transcription initiation factor TFIID subunit 8 n=... [more]
A0A5N6P0D6_9ASTR7.830e-939.73Transcription initiation factor TFIID subunit 8 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006565Bromodomain associated domainSMARTSM0057617neu3coord: 5..81
e-value: 1.2E-15
score: 68.0
IPR006565Bromodomain associated domainPFAMPF07524Bromo_TPcoord: 6..75
e-value: 1.1E-18
score: 67.0
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..90
e-value: 2.5E-20
score: 74.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 23..80
IPR037818Transcription initiation factor TFIID subunit 8PANTHERPTHR46338FAMILY NOT NAMEDcoord: 4..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig89contigS-ischiensis_contig89:437838..438683 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig89.20365.1mRNA_S-ischiensis_contig89.20365.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig89 437838..438761 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig89.20365.1 ID=prot_S-ischiensis_contig89.20365.1|Name=mRNA_S-ischiensis_contig89.20365.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=100bp
MTGSDTFARSVTRQAVAHVCLALGFDDTTSGCLETMTDVVRHYVESMGRA
AADHARRAGRTEVNLPDVLDALQQMREPLSWRDLQAFAFLEPDEGSGDAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006565BTP
IPR009072Histone-fold
IPR037818TAF8