prot_S-ischiensis_contig89.20363.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig89.20363.1
Unique Nameprot_S-ischiensis_contig89.20363.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length248
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig89.20363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..77
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 78..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..102
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 83..100
NoneNo IPR availableTMHMMTMhelixcoord: 112..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig89contigS-ischiensis_contig89:413042..417496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig89.20363.1mRNA_S-ischiensis_contig89.20363.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig89 412425..417594 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig89.20363.1 ID=prot_S-ischiensis_contig89.20363.1|Name=mRNA_S-ischiensis_contig89.20363.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=248bp
MAATTDTAVNVHNPATTVVAVPAVPPNAYVAEVGLPLDNAYGISEEPKVS
VVWASWSIGGLVVVLGFIEVIVAAMVFHEWGNIGAFWAGVLSLFAGVAAL
TLRRGRPRGGRFTGMVITLSVLAFLSILIALFYMEGLVYQVGCRAVRWLA
CCVSVFTGGFRDAERGSCRVVGYGGSKLLVLVDSVLWYCASKWPAGSRRR
LSSLLFHHLSEYGRTDGCPSAATLFMKPAPSQSRCTVNGLATMASTT*
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