prot_S-ischiensis_contig88.20321.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig88.20321.1
Unique Nameprot_S-ischiensis_contig88.20321.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length237
Homology
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A8J6C715_DIALT (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C715_DIALT)

HSP 1 Score: 199 bits (505), Expect = 9.320e-59
Identity = 95/159 (59.75%), Postives = 117/159 (73.58%), Query Frame = 0
Query:   51 VVSKEDVQARGAGVH-SEVDDYLAGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELG 208
            +VS  +V+ARG G   S +D+++A    SE+R FFTG+MF+TRLPCP WCDHHP Y MR++AWFP  G ++GLW AAF  A  +L  P VAA  ST  S+WLTGCFHEDGL DT DGFGGGWS+ +IL IMKDSR+GTY  +GL ++T  K  LL ELG
Sbjct:   29 MVSAAEVRARGTGTTASPIDEFVAAEN-SELRCFFTGMMFVTRLPCPGWCDHHPGYLMRAMAWFPALGALIGLWVAAFADAAATLVQPPVAAAFSTGASLWLTGCFHEDGLGDTLDGFGGGWSKAQILRIMKDSRIGTYACVGLCLYTVSKVLLLGELG 186          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A2P6U275_CHLSO (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U275_CHLSO)

HSP 1 Score: 196 bits (499), Expect = 4.700e-58
Identity = 102/196 (52.04%), Postives = 129/196 (65.82%), Query Frame = 0
Query:   21 MAPNRDGV-----KKRKPAQATGAKLQDRLDSGTSVVSKEDVQARGAGVHSEVDDYLAGH-VFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWS--PEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELG 208
            MAPN+ G      K+ +P    G   ++  D  +SV++KE+V+ARG+G     D Y     + SE+RVFFTG+MFLTRLP PAW DHHPAY MR++ WFPL G  +GLW AA++ A   LW   P +A  +STL +VWLTGCFHEDGL D+ DGFGGGW R +IL IMKDSRVGTY  +G  +    K  +L  LG
Sbjct:    1 MAPNKRGAAAKTDKENRPDLGPG---EEPYDYASSVITKEEVEARGSGTQEARDTYDPRRPLLSELRVFFTGIMFLTRLPVPAWVDHHPAYLMRAVMWFPLIGATIGLWGAAWYNAATLLWPQPPALAGAISTLATVWLTGCFHEDGLADSIDGFGGGWGRAQILRIMKDSRVGTYALVGTALILQAKTGVLGALG 193          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A8HM81_CHLRE (Adenosylcobinamide-GDP ribazoletransferase (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HM81_CHLRE)

HSP 1 Score: 187 bits (475), Expect = 1.210e-54
Identity = 107/210 (50.95%), Postives = 131/210 (62.38%), Query Frame = 0
Query:   22 APNRDGVKKRKPAQATGAKLQDRLDSGTS-VVSKEDVQARGAGVHSEVDDYL-AGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVA-----AVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTE-LGSVQVDSPPSG--VAG 221
            AP     +K+ PA    A   +  D  +  ++SKE+V+ARGAG     D Y  A   +SE RVFFTGLMFLTRLP P   DHHPA+ +RS+ WFPL G ++G W A F  A  +LW P  A     A +ST  +VWLTGCFHEDGL DTFDGFGGGW R +IL IMKDSRVGTY  +G    TAL  +L T  L ++   +P +G  VAG
Sbjct:   27 APPPASKQKQAPANGEAAAAAEPCDFASGGMISKEEVEARGAGTDDPGDTYSRARFAWSEWRVFFTGLMFLTRLPVPPGIDHHPAFLVRSMMWFPLLGALIGGWGAVFFNAAAALWPPAAAGSLLPAAISTFSTVWLTGCFHEDGLADTFDGFGGGWGRNQILRIMKDSRVGTYALVG----TALALQLKTSGLAAIAAAAPEAGGGVAG 232          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: R1EPP1_EMIHU (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EPP1_EMIHU)

HSP 1 Score: 189 bits (479), Expect = 1.630e-54
Identity = 98/196 (50.00%), Postives = 125/196 (63.78%), Query Frame = 0
Query:   49 TSVVSKEDVQARGAGV--HSEVDDYLA-----GHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELGSVQVDSPPSGVAGGDGEDILPWLLAWLKG 237
            TS++ + +V ARG G    + +D++ A     G V SE+R F+T +MFLTRLPCP WCDHHP Y MRS+A FPL G ++G WAAAF+ A  SLW P VAA +S   ++WLTGCFHEDGL DT DGFGGGW++ +IL IM+DSR G+Y  MG  ++   K  LL ELG         G AG  G  +  W +    G
Sbjct:   54 TSMIDRSEVAARGTGTAKRTPLDEFEAAARADGLVASELRSFWTCVMFLTRLPCPGWCDHHPGYLMRSMAHFPLIGALIGAWAAAFYDAAASLWPPLVAAAVSMAGTLWLTGCFHEDGLCDTLDGFGGGWTKSQILKIMRDSRNGSYATMGGCMWVVAKAALLAELGR--------GAAGAGGASV--WAVGGSAG 239          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A2K3E738_CHLRE (Adenosylcobinamide-GDP ribazoletransferase n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E738_CHLRE)

HSP 1 Score: 187 bits (475), Expect = 4.680e-54
Identity = 107/210 (50.95%), Postives = 131/210 (62.38%), Query Frame = 0
Query:   22 APNRDGVKKRKPAQATGAKLQDRLDSGTS-VVSKEDVQARGAGVHSEVDDYL-AGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVA-----AVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTE-LGSVQVDSPPSG--VAG 221
            AP     +K+ PA    A   +  D  +  ++SKE+V+ARGAG     D Y  A   +SE RVFFTGLMFLTRLP P   DHHPA+ +RS+ WFPL G ++G W A F  A  +LW P  A     A +ST  +VWLTGCFHEDGL DTFDGFGGGW R +IL IMKDSRVGTY  +G    TAL  +L T  L ++   +P +G  VAG
Sbjct:   27 APPPASKQKQAPANGEAAAAAEPCDFASGGMISKEEVEARGAGTDDPGDTYSRARFAWSEWRVFFTGLMFLTRLPVPPGIDHHPAFLVRSMMWFPLLGALIGGWGAVFFNAAAALWPPAAAGSLLPAAISTFSTVWLTGCFHEDGLADTFDGFGGGWGRNQILRIMKDSRVGTYALVG----TALALQLKTSGLAAIAAAAPEAGGGVAG 232          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A150GZS3_GONPE (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZS3_GONPE)

HSP 1 Score: 186 bits (473), Expect = 6.410e-54
Identity = 89/156 (57.05%), Postives = 109/156 (69.87%), Query Frame = 0
Query:   46 DSGTSVVSKEDVQARGAGVHSEVDDYLAGHVF-SEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALK 200
            D  + V++K +V+ARG+G     D Y +   + SE RVFFTGLMFLTRLP P   DHHPA+ +RS+ WFPLFG ++G W A +  A   LW P +AA +ST  +VWLTGCFHEDGL DTFDGFGGGW R +IL IMKDSRVGTY  +G  +   LK
Sbjct:   47 DYASGVITKAEVEARGSGTDDHGDTYNSKQFWWSEYRVFFTGLMFLTRLPVPPGIDHHPAFLVRSMMWFPLFGALIGAWGAVWLNAAAVLWPPGIAAAVSTFATVWLTGCFHEDGLADTFDGFGGGWGRAQILRIMKDSRVGTYALVGTALALQLK 202          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A0M0JQR0_9EUKA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQR0_9EUKA)

HSP 1 Score: 185 bits (470), Expect = 2.600e-53
Identity = 96/190 (50.53%), Postives = 123/190 (64.74%), Query Frame = 0
Query:   43 DRLDSGTSVVSKEDVQARGAG--VHSEVDDYLAGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELGSVQVDSP--PSGVAGGDGEDIL 228
            D   +G   +S   V +RG G  V + ++++ A     E+R FFTG+MFLTRLPCP WCDHHP Y MR +A+FP+ G ++GLWAAAF+ A  SLW P VAAVLS+  ++WLTGCFHEDGL DT DGFGGGW++ +IL IMKDSR G+Y  MG  ++   K   L  LG   V       G + G G  I+
Sbjct:   44 DGFGAGDRPISAAVVASRGTGTAVRTPLEEFEA-LPRDELRCFFTGVMFLTRLPCPGWCDHHPGYLMRGMAYFPVLGALIGLWAAAFYDAAASLWPPLVAAVLSSGATLWLTGCFHEDGLCDTLDGFGGGWTKAQILRIMKDSRNGSYATMGGCLWVVAKSAALARLGEGSVSGSVWALGASVGAGPSIV 232          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A2V0NMZ4_9CHLO (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NMZ4_9CHLO)

HSP 1 Score: 182 bits (462), Expect = 8.840e-53
Identity = 90/153 (58.82%), Postives = 107/153 (69.93%), Query Frame = 0
Query:   49 TSVVSKEDVQARGAGV-HSEVDDYLAGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALK 200
            +SV+S E++ ARG G    E  D   G + +EVRVFFTGLMFLTRLP PA  DHHP Y MRS  +FPL G VVGLW A F+ A   LWSP VAA  S L +VWLTGCFHEDG+ D  DGFGGGW + +IL IM+DSRVGTY  +G+ +   +K
Sbjct:   15 SSVLSAEEIAARGCGTDEGEGTDSYDGSLAAEVRVFFTGLMFLTRLPVPAGTDHHPTYLMRSTMYFPLIGAVVGLWGAVFYEAGTVLWSPAVAAGASLLATVWLTGCFHEDGMADCIDGFGGGWGKAQILRIMRDSRVGTYALVGMAVLLQIK 167          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A835WCG3_CHLIN (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WCG3_CHLIN)

HSP 1 Score: 182 bits (463), Expect = 2.930e-52
Identity = 89/154 (57.79%), Postives = 106/154 (68.83%), Query Frame = 0
Query:   52 VSKEDVQARGAGVHSEVDDYLAGH-VFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVL----STLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALK 200
            +SKE+V+ARGAG     D Y      +SE RVFFTGLMFLTRLP P   DHHPA+ +RS+ WFPL G ++G W A F+ A  +LW P   ++L    ST  +VWLTGCFHEDGL DTFDGFGGGW R +IL IMKDSRVGTY  +G  +   LK
Sbjct:   60 ISKEEVEARGAGTDDHGDTYTRNRFAWSEWRVFFTGLMFLTRLPVPPGIDHHPAFLVRSMMWFPLLGAIIGGWGAVFYNAAAALWPPAAGSLLPAAISTFSTVWLTGCFHEDGLADTFDGFGGGWGRSQILRIMKDSRVGTYALVGTALALQLK 213          
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: W7TEQ4_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEQ4_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.430e-46
Identity = 84/168 (50.00%), Postives = 111/168 (66.07%), Query Frame = 0
Query:   46 DSGTSVVSKEDVQARGAGVHSEVDDYL-AGHVFSEVRVFFTGLMFLTRLPCPAWC--DHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELGSV 210
            D+  SV+SK++++ RGAG   + D Y+    +  E RVFFT ++FLTRL  P W   DHHPAY MRS+  FP  G+ VG+WAA +  A   LW+P VAA  STL  VW+TG FHEDGL D+ D FGGGW R +IL IM D+RVGTY  +G+++   +K + L  L S+
Sbjct:   38 DNDLSVISKKEIEDRGAGTDEDTDTYVDLPFLRGEKRVFFTAVIFLTRLNVPRWAEADHHPAYLMRSMMHFPFLGLCVGIWAAVWLEAAAVLWTPFVAAAASTLAGVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLEVLQSL 205          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J6C715_DIALT9.320e-5959.75Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A2P6U275_CHLSO4.700e-5852.04Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A8HM81_CHLRE1.210e-5450.95Adenosylcobinamide-GDP ribazoletransferase (Fragme... [more]
R1EPP1_EMIHU1.630e-5450.00Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A2K3E738_CHLRE4.680e-5450.95Adenosylcobinamide-GDP ribazoletransferase n=2 Tax... [more]
A0A150GZS3_GONPE6.410e-5457.05Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A0M0JQR0_9EUKA2.600e-5350.53Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A2V0NMZ4_9CHLO8.840e-5358.82Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
A0A835WCG3_CHLIN2.930e-5257.79Adenosylcobinamide-GDP ribazoletransferase n=1 Tax... [more]
W7TEQ4_9STRA1.430e-4650.00Adenosylcobinamide-GDP ribazoletransferase n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003805Adenosylcobinamide-GDP ribazoletransferasePFAMPF02654CobScoord: 87..207
e-value: 1.5E-33
score: 116.7
IPR003805Adenosylcobinamide-GDP ribazoletransferasePANTHERPTHR34148FAMILY NOT NAMEDcoord: 78..208
IPR003805Adenosylcobinamide-GDP ribazoletransferaseHAMAPMF_00719CobScoord: 41..237
score: 28.736
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..237
NoneNo IPR availableTMHMMTMhelixcoord: 110..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig88contigS-ischiensis_contig88:415639..418508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig88.20321.1mRNA_S-ischiensis_contig88.20321.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig88 415639..418509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig88.20321.1 ID=prot_S-ischiensis_contig88.20321.1|Name=mRNA_S-ischiensis_contig88.20321.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=237bp
TSTCEAPRPLQDRLLRAPAIMAPNRDGVKKRKPAQATGAKLQDRLDSGTS
VVSKEDVQARGAGVHSEVDDYLAGHVFSEVRVFFTGLMFLTRLPCPAWCD
HHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVW
LTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALK
FRLLTELGSVQVDSPPSGVAGGDGEDILPWLLAWLKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003805CobS