mRNA_S-ischiensis_contig88.20321.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A8J6C715_DIALT (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C715_DIALT) HSP 1 Score: 199 bits (505), Expect = 9.320e-59 Identity = 95/159 (59.75%), Postives = 117/159 (73.58%), Query Frame = 1
Query: 151 VVSKEDVQARGAGVH-SEVDDYLAGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELG 624
+VS +V+ARG G S +D+++A SE+R FFTG+MF+TRLPCP WCDHHP Y MR++AWFP G ++GLW AAF A +L P VAA ST S+WLTGCFHEDGL DT DGFGGGWS+ +IL IMKDSR+GTY +GL ++T K LL ELG
Sbjct: 29 MVSAAEVRARGTGTTASPIDEFVAAEN-SELRCFFTGMMFVTRLPCPGWCDHHPGYLMRAMAWFPALGALIGLWVAAFADAAATLVQPPVAAAFSTGASLWLTGCFHEDGLGDTLDGFGGGWSKAQILRIMKDSRIGTYACVGLCLYTVSKVLLLGELG 186
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A2P6U275_CHLSO (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U275_CHLSO) HSP 1 Score: 196 bits (499), Expect = 4.700e-58 Identity = 102/196 (52.04%), Postives = 129/196 (65.82%), Query Frame = 1
Query: 61 MAPNRDGV-----KKRKPAQATGAKLQDRLDSGTSVVSKEDVQARGAGVHSEVDDYLAGH-VFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWS--PEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELG 624
MAPN+ G K+ +P G ++ D +SV++KE+V+ARG+G D Y + SE+RVFFTG+MFLTRLP PAW DHHPAY MR++ WFPL G +GLW AA++ A LW P +A +STL +VWLTGCFHEDGL D+ DGFGGGW R +IL IMKDSRVGTY +G + K +L LG
Sbjct: 1 MAPNKRGAAAKTDKENRPDLGPG---EEPYDYASSVITKEEVEARGSGTQEARDTYDPRRPLLSELRVFFTGIMFLTRLPVPAWVDHHPAYLMRAVMWFPLIGATIGLWGAAWYNAATLLWPQPPALAGAISTLATVWLTGCFHEDGLADSIDGFGGGWGRAQILRIMKDSRVGTYALVGTALILQAKTGVLGALG 193
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A8HM81_CHLRE (Adenosylcobinamide-GDP ribazoletransferase (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HM81_CHLRE) HSP 1 Score: 187 bits (475), Expect = 1.210e-54 Identity = 107/210 (50.95%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 64 APNRDGVKKRKPAQATGAKLQDRLDSGTS-VVSKEDVQARGAGVHSEVDDYL-AGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVA-----AVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTE-LGSVQVDSPPSG--VAG 663
AP +K+ PA A + D + ++SKE+V+ARGAG D Y A +SE RVFFTGLMFLTRLP P DHHPA+ +RS+ WFPL G ++G W A F A +LW P A A +ST +VWLTGCFHEDGL DTFDGFGGGW R +IL IMKDSRVGTY +G TAL +L T L ++ +P +G VAG
Sbjct: 27 APPPASKQKQAPANGEAAAAAEPCDFASGGMISKEEVEARGAGTDDPGDTYSRARFAWSEWRVFFTGLMFLTRLPVPPGIDHHPAFLVRSMMWFPLLGALIGGWGAVFFNAAAALWPPAAAGSLLPAAISTFSTVWLTGCFHEDGLADTFDGFGGGWGRNQILRIMKDSRVGTYALVG----TALALQLKTSGLAAIAAAAPEAGGGVAG 232
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: R1EPP1_EMIHU (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EPP1_EMIHU) HSP 1 Score: 189 bits (479), Expect = 1.630e-54 Identity = 98/196 (50.00%), Postives = 125/196 (63.78%), Query Frame = 1
Query: 145 TSVVSKEDVQARGAGV--HSEVDDYLA-----GHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELGSVQVDSPPSGVAGGDGEDILPWLLAWLKG 711
TS++ + +V ARG G + +D++ A G V SE+R F+T +MFLTRLPCP WCDHHP Y MRS+A FPL G ++G WAAAF+ A SLW P VAA +S ++WLTGCFHEDGL DT DGFGGGW++ +IL IM+DSR G+Y MG ++ K LL ELG G AG G + W + G
Sbjct: 54 TSMIDRSEVAARGTGTAKRTPLDEFEAAARADGLVASELRSFWTCVMFLTRLPCPGWCDHHPGYLMRSMAHFPLIGALIGAWAAAFYDAAASLWPPLVAAAVSMAGTLWLTGCFHEDGLCDTLDGFGGGWTKSQILKIMRDSRNGSYATMGGCMWVVAKAALLAELGR--------GAAGAGGASV--WAVGGSAG 239
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A2K3E738_CHLRE (Adenosylcobinamide-GDP ribazoletransferase n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E738_CHLRE) HSP 1 Score: 187 bits (475), Expect = 4.680e-54 Identity = 107/210 (50.95%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 64 APNRDGVKKRKPAQATGAKLQDRLDSGTS-VVSKEDVQARGAGVHSEVDDYL-AGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVA-----AVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTE-LGSVQVDSPPSG--VAG 663
AP +K+ PA A + D + ++SKE+V+ARGAG D Y A +SE RVFFTGLMFLTRLP P DHHPA+ +RS+ WFPL G ++G W A F A +LW P A A +ST +VWLTGCFHEDGL DTFDGFGGGW R +IL IMKDSRVGTY +G TAL +L T L ++ +P +G VAG
Sbjct: 27 APPPASKQKQAPANGEAAAAAEPCDFASGGMISKEEVEARGAGTDDPGDTYSRARFAWSEWRVFFTGLMFLTRLPVPPGIDHHPAFLVRSMMWFPLLGALIGGWGAVFFNAAAALWPPAAAGSLLPAAISTFSTVWLTGCFHEDGLADTFDGFGGGWGRNQILRIMKDSRVGTYALVG----TALALQLKTSGLAAIAAAAPEAGGGVAG 232
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A150GZS3_GONPE (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GZS3_GONPE) HSP 1 Score: 186 bits (473), Expect = 6.410e-54 Identity = 89/156 (57.05%), Postives = 109/156 (69.87%), Query Frame = 1
Query: 136 DSGTSVVSKEDVQARGAGVHSEVDDYLAGHVF-SEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALK 600
D + V++K +V+ARG+G D Y + + SE RVFFTGLMFLTRLP P DHHPA+ +RS+ WFPLFG ++G W A + A LW P +AA +ST +VWLTGCFHEDGL DTFDGFGGGW R +IL IMKDSRVGTY +G + LK
Sbjct: 47 DYASGVITKAEVEARGSGTDDHGDTYNSKQFWWSEYRVFFTGLMFLTRLPVPPGIDHHPAFLVRSMMWFPLFGALIGAWGAVWLNAAAVLWPPGIAAAVSTFATVWLTGCFHEDGLADTFDGFGGGWGRAQILRIMKDSRVGTYALVGTALALQLK 202
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A0M0JQR0_9EUKA (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQR0_9EUKA) HSP 1 Score: 185 bits (470), Expect = 2.600e-53 Identity = 96/190 (50.53%), Postives = 123/190 (64.74%), Query Frame = 1
Query: 127 DRLDSGTSVVSKEDVQARGAG--VHSEVDDYLAGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELGSVQVDSP--PSGVAGGDGEDIL 684
D +G +S V +RG G V + ++++ A E+R FFTG+MFLTRLPCP WCDHHP Y MR +A+FP+ G ++GLWAAAF+ A SLW P VAAVLS+ ++WLTGCFHEDGL DT DGFGGGW++ +IL IMKDSR G+Y MG ++ K L LG V G + G G I+
Sbjct: 44 DGFGAGDRPISAAVVASRGTGTAVRTPLEEFEA-LPRDELRCFFTGVMFLTRLPCPGWCDHHPGYLMRGMAYFPVLGALIGLWAAAFYDAAASLWPPLVAAVLSSGATLWLTGCFHEDGLCDTLDGFGGGWTKAQILRIMKDSRNGSYATMGGCLWVVAKSAALARLGEGSVSGSVWALGASVGAGPSIV 232
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A2V0NMZ4_9CHLO (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NMZ4_9CHLO) HSP 1 Score: 182 bits (462), Expect = 8.840e-53 Identity = 90/153 (58.82%), Postives = 107/153 (69.93%), Query Frame = 1
Query: 145 TSVVSKEDVQARGAGV-HSEVDDYLAGHVFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALK 600
+SV+S E++ ARG G E D G + +EVRVFFTGLMFLTRLP PA DHHP Y MRS +FPL G VVGLW A F+ A LWSP VAA S L +VWLTGCFHEDG+ D DGFGGGW + +IL IM+DSRVGTY +G+ + +K
Sbjct: 15 SSVLSAEEIAARGCGTDEGEGTDSYDGSLAAEVRVFFTGLMFLTRLPVPAGTDHHPTYLMRSTMYFPLIGAVVGLWGAVFYEAGTVLWSPAVAAGASLLATVWLTGCFHEDGMADCIDGFGGGWGKAQILRIMRDSRVGTYALVGMAVLLQIK 167
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: A0A835WCG3_CHLIN (Adenosylcobinamide-GDP ribazoletransferase n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WCG3_CHLIN) HSP 1 Score: 182 bits (463), Expect = 2.930e-52 Identity = 89/154 (57.79%), Postives = 106/154 (68.83%), Query Frame = 1
Query: 154 VSKEDVQARGAGVHSEVDDYLAGH-VFSEVRVFFTGLMFLTRLPCPAWCDHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVL----STLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALK 600
+SKE+V+ARGAG D Y +SE RVFFTGLMFLTRLP P DHHPA+ +RS+ WFPL G ++G W A F+ A +LW P ++L ST +VWLTGCFHEDGL DTFDGFGGGW R +IL IMKDSRVGTY +G + LK
Sbjct: 60 ISKEEVEARGAGTDDHGDTYTRNRFAWSEWRVFFTGLMFLTRLPVPPGIDHHPAFLVRSMMWFPLLGAIIGGWGAVFYNAAAALWPPAAGSLLPAAISTFSTVWLTGCFHEDGLADTFDGFGGGWGRSQILRIMKDSRVGTYALVGTALALQLK 213
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Match: W7TEQ4_9STRA (Adenosylcobinamide-GDP ribazoletransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEQ4_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.430e-46 Identity = 84/168 (50.00%), Postives = 111/168 (66.07%), Query Frame = 1
Query: 136 DSGTSVVSKEDVQARGAGVHSEVDDYL-AGHVFSEVRVFFTGLMFLTRLPCPAWC--DHHPAYFMRSLAWFPLFGVVVGLWAAAFHGAILSLWSPEVAAVLSTLMSVWLTGCFHEDGLTDTFDGFGGGWSRREILAIMKDSRVGTYGAMGLMIFTALKFRLLTELGSV 630
D+ SV+SK++++ RGAG + D Y+ + E RVFFT ++FLTRL P W DHHPAY MRS+ FP G+ VG+WAA + A LW+P VAA STL VW+TG FHEDGL D+ D FGGGW R +IL IM D+RVGTY +G+++ +K + L L S+
Sbjct: 38 DNDLSVISKKEIEDRGAGTDEDTDTYVDLPFLRGEKRVFFTAVIFLTRLNVPRWAEADHHPAYLMRSMMHFPFLGLCVGIWAAVWLEAAAVLWTPFVAAAASTLAGVWITGAFHEDGLADSLDAFGGGWGRLQILRIMTDTRVGTYALVGMILVMGMKLKSLEVLQSL 205 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig88.20321.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig88.20321.1 >prot_S-ischiensis_contig88.20321.1 ID=prot_S-ischiensis_contig88.20321.1|Name=mRNA_S-ischiensis_contig88.20321.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=237bp TSTCEAPRPLQDRLLRAPAIMAPNRDGVKKRKPAQATGAKLQDRLDSGTSback to top mRNA from alignment at S-ischiensis_contig88:415639..418509+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig88.20321.1 ID=mRNA_S-ischiensis_contig88.20321.1|Name=mRNA_S-ischiensis_contig88.20321.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2871bp|location=Sequence derived from alignment at S-ischiensis_contig88:415639..418509+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig88:415639..418509+ >mRNA_S-ischiensis_contig88.20321.1 ID=mRNA_S-ischiensis_contig88.20321.1|Name=mRNA_S-ischiensis_contig88.20321.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1422bp|location=Sequence derived from alignment at S-ischiensis_contig88:415639..418509+ (Schizocladia ischiensis KU_0333)back to top |