prot_S-ischiensis_contig87.20284.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig87.20284.1
Unique Nameprot_S-ischiensis_contig87.20284.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length184
Homology
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: D8LRA8_ECTSI (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA8_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 7.700e-54
Identity = 104/183 (56.83%), Postives = 126/183 (68.85%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPSLPQLAAQLERLTKAVN-AGTGRNEGGGVEVAGLRMAGPGAAKA-IQEGADEKRKTYACLVWTSRPTMPADMQALNVTD----LVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDVAGVE 177
            MLG GRPF LEL DS  S+ ++AA+L  L  AVN AG  +N GGGV V+ L+++GPG   + +Q   + KRK Y C+VW SRP    ++      D    LVVQQ TP+RVLHRRTLL RP+++  M AEWIN H+  L L TSAG Y+KEFVHGD GRTVPS+GSLL C ADILQLDV  VE
Sbjct:  400 MLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNAGGGVAVSRLQVSGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLDCRADILQLDVTNVE 582          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: A0A6H5KZN5_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZN5_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 1.270e-53
Identity = 106/183 (57.92%), Postives = 126/183 (68.85%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPSLPQLAAQLERLTKAVN-AGTGRNEGGGVEVAGLRMAGPGAAKA-IQEGADEKRKTYACLVWTSRPTMPADMQALNVTD----LVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDVAGVE 177
            MLG GRPF LEL DS  S+ ++AA+L  L  AVN AG  +N GGGV V+ LR+AGPG   + +Q   + KRK Y C+VW SRP    ++      D    LVVQQ TP+RVLHRRTLL RP+++  M AEWIN H+  L L TSAG Y+KEFVHGD GRTVPS+GSLL C ADILQLDV  VE
Sbjct:  606 MLGKGRPFCLELVDSLRSVDEIAARLPSLADAVNTAGGVKNVGGGVAVSRLRVAGPGELPSDVQAVGEGKRKHYRCVVWVSRPVGKEELVKALCEDAPEELVVQQATPIRVLHRRTLLDRPRSIFGMRAEWINEHFFQLELATSAGTYIKEFVHGDLGRTVPSIGSLLDCRADILQLDVTNVE 788          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: A0A836CNG6_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNG6_9STRA)

HSP 1 Score: 186 bits (472), Expect = 4.610e-52
Identity = 105/182 (57.69%), Postives = 124/182 (68.13%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPSLPQLAAQLERLTKAVNAGTGRNEGGGVEVAGLRMAGPGAAKAIQEGADEKRKTYACLVWTSRPTMPADMQA-LNV----TDLVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDVAGVE 177
            MLG+GRPFVLE+ DSK +  QLA  L RL + VNA TG N  G VEV+  ++ G      IQEGA+ KRK Y C+VWTSR    A++ A L+      DL V+Q TPVRVLHRR  LTR KT+ A+ A  +   +  L LTTSAG YVKEFVHGD GRTVPSVG+LL C ADILQLDV GV+
Sbjct:  491 MLGNGRPFVLEVIDSKVTAQQLADALPRLQREVNACTGLNSEGAVEVSDFKLVGRDIYSQIQEGAEGKRKHYRCVVWTSRDVSQAELDAALHAHPPGADLEVRQSTPVRVLHRRAALTRVKTVRALRAARVAPRFFVLSLTTSAGTYVKEFVHGDLGRTVPSVGALLGCRADILQLDVVGVD 672          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: A0A1V9Z0V9_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0V9_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.200e-49
Identity = 100/176 (56.82%), Postives = 116/176 (65.91%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPSL--PQLAAQLERLTKAVNAGTGRNEGGGVEVAGLRMAGPGAAKAIQEGADEKRKTYACLVWTSRPTMPADMQALN-VTDLVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDV 173
            MLG+GRPF+LEL D+K +   P+  A ++    A N          VEV  L  A      A+Q GAD KRKTY C+VWTS    PA +  LN + DL V QKTPVRVLHRRTLLTRPK +H    E +N HY+ LRLTTSAG YVKEFVHGD GRT P+V SLL C+ADILQLDV
Sbjct:  302 MLGNGRPFILELLDAKVATLSPEAFATVQNRVNAANLDV-------VEVRELTGATKEGFAALQSGADSKRKTYCCVVWTSGVLTPARVATLNGIVDLKVAQKTPVRVLHRRTLLTRPKVIHDARVEVLNDHYMLLRLTTSAGTYVKEFVHGDLGRTFPNVASLLGCDADILQLDV 470          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: A0A3R7CT38_9STRA (tRNA pseudouridine(55) synthase (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7CT38_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.830e-48
Identity = 90/174 (51.72%), Postives = 112/174 (64.37%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPSLPQLAAQLERLTKAVNAGTGRNEGGGVEVAGLRMAGPGAAKAIQEGADEKRKTYACLVWTSRPTMPADMQALN-VTDLVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDV 173
            MLG+GRPF+LEL   +       A + R  + VN          VE+ G ++        +Q GAD KRKTY C+VW +    P  +  LN ++DL V QKTPVRVLHRRTLLTRPK +H+     +N HY+ LRLTTSAG YVKEFVHGD GRT+P+V +LL C+ADILQLDV
Sbjct:   64 MLGNGRPFILELIGGR-------APVARALRKVN----ETNADRVEIRGFQLTDKKRFSVLQAGADSKRKTYCCVVWVAEKLTPDRVATLNSISDLAVAQKTPVRVLHRRTLLTRPKVIHSANVTVLNDHYMLLRLTTSAGTYVKEFVHGDLGRTLPNVSTLLGCDADILQLDV 226          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: A0A067D9A4_SAPPC (tRNA pseudouridine(55) synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D9A4_SAPPC)

HSP 1 Score: 172 bits (436), Expect = 3.940e-48
Identity = 99/176 (56.25%), Postives = 117/176 (66.48%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSK-PSLP-QLAAQLERLTKAVNAGTGRNEGGGVEVAGLRMAGPGAAKAIQEGADEKRKTYACLVWTSRPTMPADMQALN-VTDLVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDV 173
            MLG+GRPF+LEL D+K  +LP  + A ++    A N          VE+  L  A      A+Q GAD KRKTY C+VWTS    P  +  LN + DL V QKTPVRVLHRRTLLTRPK +H  + E +N HY+ LRLTTSAG YVKEFVHGD GRT P+V SLL C+ADILQLDV
Sbjct:  307 MLGNGRPFILELLDAKVATLPADMYATVQAQVNAANTDI-------VEIRELSSATKEGFAALQSGADSKRKTYCCVVWTSGVLTPERVAILNGICDLRVGQKTPVRVLHRRTLLTRPKVIHDASVELLNDHYMLLRLTTSAGTYVKEFVHGDLGRTYPNVASLLGCDADILQLDV 475          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: A0A8K1C5Y9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Y9_PYTOL)

HSP 1 Score: 172 bits (435), Expect = 7.590e-48
Identity = 93/176 (52.84%), Postives = 121/176 (68.75%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPSLPQLAAQLERLTKAVNAGTGRNEGGGVEVAGLRMAGPGAAKAIQEGADEKRKTYACLVWTSR---PTMPADMQALNVTDLVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDV 173
            MLG+GRPF+LE+ D+K S     A+ E+L  AVN        G VE+  ++ +       +Q GAD KRKTY C+VW+ +   P + A + A++  DL +QQ+TP+RVLHRRTL+TRPK +HA   E +N HY+ LRLTTSAG YVKEFVHGD GRTVP+V ++L C ADILQLDV
Sbjct:  337 MLGNGRPFILEILDAKKS-KLTPAEYEQLQAAVNT----THQGAVEIREVKASTKEYFGKLQAGADSKRKTYCCVVWSEKELTPDLVAKLDAIH--DLTIQQQTPIRVLHRRTLMTRPKVIHATKCEVLNKHYMLLRLTTSAGTYVKEFVHGDRGRTVPNVSTILECEADILQLDV 505          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: A0A2D4BIW0_PYTIN (tRNA pseudouridine(55) synthase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIW0_PYTIN)

HSP 1 Score: 168 bits (426), Expect = 3.910e-47
Identity = 99/173 (57.23%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPSLPQLAAQLERLTKAVNAGTGRNEGGGVEVAGLRMAGPGAAKAIQEGADEKRKTYACLVWTSRPTMPADMQALNVTDLVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDV 173
            MLG+GRPF+LEL D+K      + +LE L  AVN    R   G VE+  +R +       +Q GAD KRKTY C++ T     P D     + DLV+QQKTPVRVLHRRTLLTRPK +HA   E +NAHY+ LRLTTSAG YVKEFVHGD GRTVP+V SLL  +ADILQLDV
Sbjct:  270 MLGNGRPFILELLDAKKGTLS-SEELEALKDAVN----RQNDGVVEIREVRPSTKEYFANLQAGADSKRKTYCCVL-TPEAIAPIDA----IQDLVIQQKTPVRVLHRRTLLTRPKIIHAARCEVLNAHYMLLRLTTSAGTYVKEFVHGDRGRTVPNVASLLGADADILQLDV 432          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: A0A3F2RYC7_9STRA (tRNA pseudouridine(55) synthase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYC7_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.420e-46
Identity = 89/175 (50.86%), Postives = 120/175 (68.57%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPS-LPQLAAQLERLTKAVNAGTGRNEGGGVEVAGLRMAGPGAAKAIQEGADEKRKTYACLVWTSRPTMPADMQALN-VTDLVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDV 173
            MLG+GRPF+LE+ D+K + L Q  A+ +++ KAVN        G VE+   + +       +Q GAD K+KTY C+VW+     P  +  ++ + DL +QQ+TP+RVLHRRTL+TRPK +HA   E +N HY+ LRLTTSAG YVKEFVHGD GRT P+V S+L C+ADI+QLDV
Sbjct:  312 MLGNGRPFILEILDAKKAYLDQ--AEYDQIQKAVNVANK----GAVEIVDAKSSSKDYFTGLQAGADSKKKTYCCVVWSEGALTPESIAKIDTIQDLTIQQQTPIRVLHRRTLMTRPKIIHAAKCEVLNKHYMLLRLTTSAGTYVKEFVHGDRGRTNPNVASILGCDADIIQLDV 480          
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Match: H3HD02_PHYRM (tRNA pseudouridine(55) synthase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD02_PHYRM)

HSP 1 Score: 167 bits (424), Expect = 1.920e-46
Identity = 87/174 (50.00%), Postives = 119/174 (68.39%), Query Frame = 0
Query:    1 MLGDGRPFVLELADSKPSLPQLAAQLERLTKAVNAGTGRNEGGGVEVAGLRMAGPGAAKAIQEGADEKRKTYACLVWTSRPTMPADMQALN-VTDLVVQQKTPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGDFGRTVPSVGSLLRCNADILQLDV 173
            MLG+GRPF+LE+ D+K +     ++ + + KAVNA       G VE+  ++ +       +Q GAD K+KTY C+VW+     P  +  ++ + DL +QQ+TP+RVLHRRTL+TRPK +HA   E +N HY+ LRLTTSAG YVKEFVHGD GRT P+V S+L C+ADI+QLDV
Sbjct:  310 MLGNGRPFILEILDAKKAYLN-QSEYDGIQKAVNAANN----GAVEIVQVKSSTKDYFAGLQAGADSKKKTYCCVVWSEGELTPESVAKIDAIQDLTIQQQTPIRVLHRRTLMTRPKIIHAAKCEVLNKHYMMLRLTTSAGTYVKEFVHGDRGRTNPNVASILDCDADIIQLDV 478          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRA8_ECTSI7.700e-5456.83tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
A0A6H5KZN5_9PHAE1.270e-5357.92tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus... [more]
A0A836CNG6_9STRA4.610e-5257.69tRNA pseudouridine(55) synthase n=1 Tax=Tribonema ... [more]
A0A1V9Z0V9_9STRA1.200e-4956.82tRNA pseudouridine(55) synthase n=1 Tax=Achlya hyp... [more]
A0A3R7CT38_9STRA1.830e-4851.72tRNA pseudouridine(55) synthase (Fragment) n=1 Tax... [more]
A0A067D9A4_SAPPC3.940e-4856.25tRNA pseudouridine(55) synthase n=2 Tax=Saprolegni... [more]
A0A8K1C5Y9_PYTOL7.590e-4852.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BIW0_PYTIN3.910e-4757.23tRNA pseudouridine(55) synthase n=1 Tax=Pythium in... [more]
A0A3F2RYC7_9STRA1.420e-4650.86tRNA pseudouridine(55) synthase n=3 Tax=Phytophtho... [more]
H3HD02_PHYRM1.920e-4650.00tRNA pseudouridine(55) synthase n=1 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.3190coord: 70..177
e-value: 2.0E-38
score: 132.3
NoneNo IPR availableGENE3D3.30.70.2510coord: 1..69
e-value: 3.6E-5
score: 25.9
IPR039894tRNA pseudouridine synthase Pus10-likePANTHERPTHR21568UNCHARACTERIZEDcoord: 1..177
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 62..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:499502..502032 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20284.1mRNA_S-ischiensis_contig87.20284.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig87 499013..502589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig87.20284.1 ID=prot_S-ischiensis_contig87.20284.1|Name=mRNA_S-ischiensis_contig87.20284.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=184bp
MLGDGRPFVLELADSKPSLPQLAAQLERLTKAVNAGTGRNEGGGVEVAGL
RMAGPGAAKAIQEGADEKRKTYACLVWTSRPTMPADMQALNVTDLVVQQK
TPVRVLHRRTLLTRPKTLHAMTAEWINAHYLTLRLTTSAGFYVKEFVHGD
FGRTVPSVGSLLRCNADILQLDVAGVEGSSVGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039894Pus10-like
IPR020103PsdUridine_synth_cat_dom_sf