prot_S-ischiensis_contig87.20277.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig87.20277.1
Unique Nameprot_S-ischiensis_contig87.20277.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length282
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig87.20277.1 vs. uniprot
Match: D8LRB0_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB0_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 1.610e-60
Identity = 110/172 (63.95%), Postives = 138/172 (80.23%), Query Frame = 0 
Query:   28 RRAGTGMPSLLACLKGLRRAGAWLSEREYACYVAGFTEVVSTGEKAWQALSKRRPAPDVGAVERVKAAVIEARHLMEEYGGTSDSAPHAGARLVARMARGLLDTDGERIHELCRDMATAARAAVVVPEEVFEDETAGELQLRYVAHLEGEPLDRAARMPDKVRALGQLLAPF 199
            ++ G+G+PSLLACLKGL+RAG  LSER + CYV GFTE+VS  EKAW A+SKR P PDV AV+RVKAA+IE  HL E++GG +   PH+GARLV RM RGLL++DGER+ EL + +ATAARA +VV  +VF+DE AGELQLRY+A L+G PLD+AAR  +K+R L +LLAPF
Sbjct:  306 KQYGSGLPSLLACLKGLKRAGTRLSERHFFCYVGGFTELVSAAEKAWVAISKRSP-PDVAAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRMVRGLLESDGERLKELSKRIATAARAPIVVG-DVFQDEAAGELQLRYMASLDGAPLDKAARTHEKLRTLSELLAPF 475
[Close]
BLAST of mRNA_S-ischiensis_contig87.20277.1 vs. uniprot
Match: A0A6H5LG27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LG27_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 8.740e-42
Identity = 84/135 (62.22%), Postives = 106/135 (78.52%), Query Frame = 0 
Query:   65 EVVSTGEKAWQALSKRRPAPDVGAVERVKAAVIEARHLMEEYGGTSDSAPHAGARLVARMARGLLDTDGERIHELCRDMATAARAAVVVPEEVFEDETAGELQLRYVAHLEGEPLDRAARMPDKVRALGQLLAPF 199
            E+VS  EKAW A+SKR P PD  AV+RVKAA+IE  HL E++GG +   PH+GARLV RM RGLL++DGER+ EL + +ATAARA +VV  +VF+DE AGELQLRY+A L+G PLD+AAR  +K+R L +LLAPF
Sbjct:  812 ELVSAAEKAWVAISKRSP-PDAAAVDRVKAAIIEGTHLAEDHGGGTGDVPHSGARLVVRMVRGLLESDGERLKELSKRIATAARAPIVVG-DVFQDEAAGELQLRYMASLDGAPLDKAARTHEKLRTLSELLAPF 944
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRB0_ECTSI1.610e-6063.95NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5LG27_9PHAE8.740e-4262.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:457234..462015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20277.1mRNA_S-ischiensis_contig87.20277.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig87 457234..462015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig87.20277.1 ID=prot_S-ischiensis_contig87.20277.1|Name=mRNA_S-ischiensis_contig87.20277.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=282bp
PAAAAAAAAGSALPPPPRPRLPETVPARRAGTGMPSLLACLKGLRRAGAW
LSEREYACYVAGFTEVVSTGEKAWQALSKRRPAPDVGAVERVKAAVIEAR
HLMEEYGGTSDSAPHAGARLVARMARGLLDTDGERIHELCRDMATAARAA
VVVPEEVFEDETAGELQLRYVAHLEGEPLDRAARMPDKVRALGQLLAPFL
SSHSRGTSPRAQAQGVTVLPGSGGYGSYSYGGGFASNGHNGPGGFAVGFT
HGRFSHALGDSGGGGGGGGIGIGAELLVPVRA
back to top