prot_S-ischiensis_contig87.20223.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig87.20223.1
Unique Nameprot_S-ischiensis_contig87.20223.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length215
Homology
BLAST of mRNA_S-ischiensis_contig87.20223.1 vs. uniprot
Match: D7G2B9_ECTSI (Similar to dermatan 4-sulfotransferase-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B9_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 6.560e-23
Identity = 65/198 (32.83%), Postives = 105/198 (53.03%), Query Frame = 0
Query:    2 IVVREPVERALSGFLQKCGHMWSRGHWLNCPL-HIYPKLVPGL---DIATNKLACRGQEEAVVKVRTMLGQWASDKPKDAFLAYTTALQRNVNQLVSRGKCAMINPHWRPQQCFCGLGPHGYASAFRIVPMSNMTAEAVAAMEALQLPTPERRREIVEFVQARFEVDQDTGAKQMGASNWTEKSHYFSEAAVEIVRKV 195
            +VVR+P +R LS FL KC      G W NCP     P+  PG+   D AT+            K R  +    +D+P+  F  +   ++R+V     R     +N HWRPQ CFC +    +  ++ +VP +NM+ EAV  ++ ++ P+P+R   + EF+  RF  +QD  AK  GA++  E+  YFS+ A+++++ V
Sbjct:   75 VVVRDPADRLLSAFLNKC----LGGEWQNCPYTEFMPQRFPGVSKRDAATD-----------TKFRAAM----NDEPRKVFRDFMLGVRRDV-----RLTGCKVNSHWRPQHCFCSIAR--FRESYHVVPFANMSTEAVNLVDHMRRPSPDRAELLREFIVQRFSSNQD--AKAQGATSKRER--YFSQEALDVIKMV 242          
BLAST of mRNA_S-ischiensis_contig87.20223.1 vs. uniprot
Match: D8LPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX9_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.820e-11
Identity = 60/236 (25.42%), Postives = 93/236 (39.41%), Query Frame = 0
Query:    2 IVVREPVERALSGFLQKC---GHMWSRGHWLNCPLHIYPKLVPGLDIATNKLACRGQEEAVVKVRTMLGQWASDKPKDAFLAYTTALQRNVNQLVSRGKCAMINPHWRPQQCFCGLGPHGYASAFRIVPMSNMTAEAVAAMEALQLPTP---------------------------------------ERRREIVEFVQARFEVDQDTGAKQMGASNWTEKSHYFSEAAVEIVRKV 195
            +VVR+P ER +S FL KC   G+M  R +    P   Y  L+P L             EA +     L      +P+D F  + + +   + +      C + N H++PQ CFC L       AF ++P  NM+AEA A    +  P P                                        RR+EI +F+  RFE  +D   K  GA++   K+ + S   + +V ++
Sbjct:  136 VVVRDPAERLVSAFLNKCVTDGYMRGRLNRQGAPNCAYLSLMPTL--------FPNATEATLDTHQTLRDLVEREPEDTFYHFASGILAEMKR--EGDACKVSNHHFQPQMCFCDL--REILPAFHVIPFHNMSAEAAAFAARIPEPLPISPHKEATDGGTAGISKSSIGKDGPGGMAQGGRGTGVSGSRRQEIADFLTERFETARDKDVKVTGAAD--RKNMFLSNRVLRVVHQM 357          
BLAST of mRNA_S-ischiensis_contig87.20223.1 vs. uniprot
Match: A0A6H5JC58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC58_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.820e-10
Identity = 44/136 (32.35%), Postives = 67/136 (49.26%), Query Frame = 0
Query:    2 IVVREPVERALSGFLQKCGHMWSRGHWLNCPL-HIYPKLVPGL---DIATNKLACRGQEEAVVKVRTMLGQWASDKPKDAFLAYTTALQRNVNQLVSRGKCAMINPHWRPQQCFCGLGPHGYASAFRIVPMSNMTA 133
            +VVR+P +R LS FL KC      G W NCP     P+  PG+   D AT+            K R  +    +D+P+  F  +   +Q++V     R +   +N HWRPQ CFC +    +  ++ +VP +NM+A
Sbjct:  240 VVVRDPADRLLSAFLNKC----LGGEWQNCPYTEFMPQRFPGVSKRDAATD-----------TKFRAAI----NDEPRKVFRDFMLGVQKDV-----RLRGCKVNSHWRPQHCFCSIAR--FRESYHVVPFANMSA 349          
BLAST of mRNA_S-ischiensis_contig87.20223.1 vs. uniprot
Match: A0A6H5JKQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ4_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.330e-9
Identity = 58/187 (31.02%), Postives = 84/187 (44.92%), Query Frame = 0
Query:    3 VVREPVERALSGFLQKCGHMWSRGHWLNCP-LHIYPKLVPGLDIATNKLACRGQEEAVVKVRTMLGQWASDKPKDAFLA-YTTALQRNVNQLVSRGKCAMINPHWRPQQCFCGLGPHGYASAFRIVPMSNMTAEAVAAMEALQLPTPERRREIVEFVQARFEVDQDTGAKQMGASNWTEKSHYFSEA 187
            VVREP +R LS FLQKC        + NCP L ++P L              G     V    ++ +  + + +D+  A Y   + R V Q      C   N HW PQ C C L     A  FRIV  +NMT  A AA+      +  R  EI EF+  R + + +   K+  A + ++++ Y +EA
Sbjct:  176 VVREPAQRLLSCFLQKCNRYNMENEYSNCPYLELWPDLFDRERFPDGVPTRPG-----VDTLAIVWEAFTSRGRDSMFAPYVEVITRRVKQ----DPCGQ-NKHWSPQYCHCSLDVT--APVFRIVGWANMTEAASAAIVPFASSSA-RGLEIKEFLVDRMDTNHERHGKKTSAGSRSQEA-YTAEA 348          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig87.20223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2B9_ECTSI6.560e-2332.83Similar to dermatan 4-sulfotransferase-1 n=1 Tax=E... [more]
D8LPX9_ECTSI1.820e-1125.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC58_9PHAE1.820e-1032.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKQ4_9PHAE4.330e-931.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 2..145
e-value: 4.0E-5
score: 23.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig87contigS-ischiensis_contig87:34794..39405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig87.20223.1mRNA_S-ischiensis_contig87.20223.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig87 32453..40194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig87.20223.1 ID=prot_S-ischiensis_contig87.20223.1|Name=mRNA_S-ischiensis_contig87.20223.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=215bp
MIVVREPVERALSGFLQKCGHMWSRGHWLNCPLHIYPKLVPGLDIATNKL
ACRGQEEAVVKVRTMLGQWASDKPKDAFLAYTTALQRNVNQLVSRGKCAM
INPHWRPQQCFCGLGPHGYASAFRIVPMSNMTAEAVAAMEALQLPTPERR
REIVEFVQARFEVDQDTGAKQMGASNWTEKSHYFSEAAVEIVRKVSALGT
VHTKCFEVLRSMYT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase