prot_S-ischiensis_contig86.20199.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-ischiensis_contig86.20199.1
Unique Name	prot_S-ischiensis_contig86.20199.1
Type	polypeptide
Organism	Schizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length	232

Homology

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A6H5KZP7_9PHAE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP7_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 4.890e-71
Identity = 119/183 (65.03%), Postives = 138/183 (75.41%), Query Frame = 0

Query:   36 PALASGLLGSSPATADLMDHYQGDIPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRVPPDLAA 218
            P+L   +   +PATAD+MD Y GD     VQV  + +FRDYGG SRF GRV TVKCFENNPLVRQRLT+EDG G+VLVVDGGGS R ALMGD LA G ++ GW GVIINGAVRD++EI  L  FGCKAL + P KS+K  PGE  VPV F G+RF+ GQ+VYADEDG+VVSD  LRVP D +A
Sbjct:   10 PSLKGQVQDQAPATADIMDDYDGD-----VQVV-TNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGAGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLP-FGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFKAGQFVYADEDGIVVSDEPLRVPRDRSA 185

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A836C6L7_9STRA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6L7_9STRA)

HSP 1 Score: 218 bits (555), Expect = 8.110e-69
Identity = 113/168 (67.26%), Postives = 133/168 (79.17%), Query Frame = 0

Query:   46 SPATADLMDHYQGDIPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRVP 213
            SPATAD+MDH+QG      VQVA S  FRDYGG  RFSG +ATV+C ENNPLVRQRLT+E G GRVLVVDGGGSTRCAL+GDMLA GAV+ GW+GVI++G +RD+A I+ L   G KA+ ++P KS K  PGEADVPVTFAG+ F PG +VYADEDG+VVS  EL +P
Sbjct:    9 SPATADIMDHFQGQ-----VQVAPSIGFRDYGGVRRFSGGIATVRCRENNPLVRQRLTKEAGGGRVLVVDGGGSTRCALLGDMLAAGAVQNGWAGVIVHGCIRDSAAIAQLP-LGVKAIGTNPTKSGKADPGEADVPVTFAGVVFTPGHWVYADEDGIVVSAIELALP 170

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A2V0NJW2_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NJW2_9CHLO)

HSP 1 Score: 187 bits (475), Expect = 5.310e-56
Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 0

Query:   49 TADLMDHYQGD----IPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 212
            TADL D +  +    I    VQ+A  G FRD+GGR++FSG  +TV CFENNPLVR+ L  E GEGRVLVVD G S RCA++GD LA+ A + GWSG+I++G +RD+A I+ L   G KALA+HP KS K  PG  DVPVTFAG+  +PG +VYADEDG++V+  EL++
Sbjct:   66 TADLCDVHVPEPVDKISQRKVQIAQPGLFRDFGGRAKFSGPASTVLCFENNPLVRKALCDEKGEGRVLVVDAGASMRCAVLGDNLAESAQKNGWSGIIVHGCIRDSATIAALPNLGVKALATHPLKSSKRDPGFRDVPVTFAGVTIKPGDWVYADEDGILVAPHELKL 233

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A8J4C4G4_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4C4G4_9CHLO)

HSP 1 Score: 183 bits (465), Expect = 8.750e-55
Identity = 95/168 (56.55%), Postives = 119/168 (70.83%), Query Frame = 0

Query:   49 TADLMDHYQGDIPDG----SVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 212
            TADL D Y  D  D     SVQ+     FRD+GG+ RFSG+  TVKC+ENNPLVR+ L  E G GRVLVVDGGGS RCAL+GDMLA+  V+ GWSG+I+NG +RD+A+I+ +   G KAL +HP KS K  PG+ DVPV+F G+   PG +VYAD DG++VS  EL +
Sbjct:   46 TADLTDKYLPDPVDTICTRSVQIVTPNLFRDFGGKLRFSGQATTVKCYENNPLVRKAL-EEPGIGRVLVVDGGGSLRCALLGDMLAENGVKNGWSGIIVNGCIRDSADIARMP-LGVKALGTHPLKSSKRDPGQRDVPVSFGGVTVSPGDWVYADGDGILVSKEELTL 211

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A0D2MXE5_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MXE5_9CHLO)

HSP 1 Score: 179 bits (453), Expect = 2.700e-53
Identity = 92/168 (54.76%), Postives = 117/168 (69.64%), Query Frame = 0

Query:   49 TADLMDHYQGD----IPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 212
            TADL D +  +    I    VQ+A +G FRD+GGR +FSG+ +TV CFENNPLVR+ L  E G GRVLVVD GGS RCA++GD LA+ A   GWSG+I++G +RD+  I  L   G KALA+HP KS K  PG  DVPVTFAG+  +PG +VYAD DG++VS   L++
Sbjct:   21 TADLCDVFVPEPVDQITTRKVQIAHAGVFRDFGGRLKFSGQASTVSCFENNPLVRKAL-EEPGAGRVLVVDAGGSKRCAVLGDNLAESAQRNGWSGIIVHGCIRDSEAIGKLPNLGVKALATHPLKSSKRDPGLRDVPVTFAGVSIKPGDWVYADADGILVSPTPLKL 187

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A150GI59_GONPE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Chlamydomonadales TaxID=3042 RepID=A0A150GI59_GONPE)

HSP 1 Score: 174 bits (441), Expect = 1.330e-51
Identity = 90/168 (53.57%), Postives = 116/168 (69.05%), Query Frame = 0

Query:   49 TADLMDHYQGDIPDGSV----QVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 212
            TADL D Y  D  D +V    QV     FRD+GG+ RFSG+ +TVKC+ENNPL  +    E G GRVLVVDGGGS RCAL+GDMLA+  V+ GW+G+I+NG +RD+A+I+ +   G KAL +HP KS K  PG  DVPV+F G+   PG +VYAD DG++V+  EL +
Sbjct:   16 TADLTDKYLPDPVDATVNRAVQVVTPNLFRDFGGKLRFSGQASTVKCYENNPLALE----EPGRGRVLVVDGGGSLRCALLGDMLAENGVKNGWAGIIVNGCIRDSADIARMP-LGVKALGTHPLKSSKRDPGLRDVPVSFGGVTVAPGDWVYADGDGILVAKEELTL 178

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A7S0VJ91_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VJ91_9CHLO)

HSP 1 Score: 173 bits (438), Expect = 3.330e-51
Identity = 89/168 (52.98%), Postives = 116/168 (69.05%), Query Frame = 0

Query:   49 TADLMDHYQGD----IPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 212
            TADL D Y  D    I    V++A    F +YGG  RFSG+  T+KC+ENNPLVR+ L  E G GRVLVVDGG S RCAL+GDMLA+  ++ GW G+I+NG +RD+ +IS + A G KALA++P KS K   G  +VPVTFAG+   PG+++YAD DG++VS  EL +
Sbjct:    9 TADLCDKYLTDPVDIIVQSDVRIA-EPLFSNYGGNKRFSGQAVTIKCYENNPLVRKMLMEEPGNGRVLVVDGGASKRCALLGDMLAEAGMKNGWKGIIVNGCIRDSEDISNM-AIGVKALATYPLKSSKRDTGLLNVPVTFAGVTISPGEWIYADLDGIIVSKLELTL 174

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A090M175_OSTTA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M175_OSTTA)

HSP 1 Score: 174 bits (440), Expect = 4.080e-51
Identity = 95/171 (55.56%), Postives = 115/171 (67.25%), Query Frame = 0

Query:   49 TADLMD-HYQGDIPD------GSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 212
            T+D+ D H+ G + D        V+VA +   +DYGG  RF G V+TV CFENNPLVR  L  E G GRVLVVDGGGS RCAL+GD LA+ A   GWSGVI+NG VRD+ +I+     G KA+ +HP KS K  PG  DVPVTFAG+ F PG YVYAD DG+VVS  +L +
Sbjct:   35 TSDICDVHHPGLVDDVIGTSASRVRVARANALKDYGGLRRFRGEVSTVLCFENNPLVRLAL-EEPGLGRVLVVDGGGSERCALLGDNLAETAARNGWSGVIVNGCVRDSEDIAKFNV-GVKAIGTHPLKSSKRDPGLRDVPVTFAGVTFVPGSYVYADADGIVVSPEKLEI 203

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A5B8MPX1_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MPX1_9CHLO)

HSP 1 Score: 174 bits (442), Expect = 6.970e-51
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 0

Query:   49 TADLMDHYQGDIPDG----SVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 212
            TADL D +  D  D     +V+ A    FRDYG + RF G ++TVKCFENNPLVR+ L  E+G+GRVLVVD G STRCA++GDMLA+   + GW G+IING  RD+ +I  +   G KA+ +HP KS K  PG  DV V+FAG+ FRPG+YVYAD DGV+VS ++L +
Sbjct:   79 TADLCDVHMPDPVDAIVPRAVEAASVNYFRDYGSKRRFFGPISTVKCFENNPLVRKAL-EEEGKGRVLVVDAGASTRCAVLGDMLAEMGAKNGWEGIIINGCCRDSEDIGRMD-IGVKAIGTHPLKSSKRDPGLRDVDVSFAGVTFRPGEYVYADNDGVLVSRKKLEL 244

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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: UPI001907F4AC (ribonuclease E activity regulator RraA n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI001907F4AC)

HSP 1 Score: 171 bits (433), Expect = 1.520e-50
Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 0

Query:   49 TADLMDHYQGDIPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDREL 210
            TADL+D Y+      SV+V     FRD+GG +RF GRV T+KCFE+N LV+  L  E G GRVLVVD GGS RCA++GD++A  AVE+GW+GVI++G +RD+ EI+ +   G KALA+HP KS K   G+ DVP+TFAG+RF PG  VY DEDG++VS+  L
Sbjct:   10 TADLVDQYEE-----SVRVCDP-LFRDFGGHTRFHGRVVTLKCFEDNSLVKATLA-EPGHGRVLVVDAGGSLRCAMLGDLIAGSAVEQGWAGVILHGCIRDSREIAAMP-LGVKALATHPRKSLKRGEGQRDVPITFAGVRFVPGDLVYCDEDGILVSEEAL 163

The following BLAST results are available for this feature:

BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot

BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KZP7_9PHAE	4.890e-71	65.03	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
A0A836C6L7_9STRA	8.110e-69	67.26	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
A0A2V0NJW2_9CHLO	5.310e-56	55.95	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
A0A8J4C4G4_9CHLO	8.750e-55	56.55	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax...	[more]
A0A0D2MXE5_9CHLO	2.700e-53	54.76	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
A0A150GI59_GONPE	1.330e-51	53.57	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax...	[more]
A0A7S0VJ91_9CHLO	3.330e-51	52.98	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
A0A090M175_OSTTA	4.080e-51	55.56	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=2 Tax...	[more]
A0A5B8MPX1_9CHLO	6.970e-51	54.17	4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax...	[more]
UPI001907F4AC	1.520e-50	55.56	ribonuclease E activity regulator RraA n=1 Tax=Thi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	PFAM	PF03737	RraA-like	coord: 49..205 e-value: 7.0E-42 score: 143.1
IPR010203	Regulator of ribonuclease activity A	TIGRFAM	TIGR01935	TIGR01935	coord: 49..206 e-value: 2.8E-55 score: 184.2
None	No IPR available	GENE3D	3.50.30.40		coord: 46..213 e-value: 1.8E-57 score: 195.6
None	No IPR available	PANTHER	PTHR33254	FAMILY NOT NAMED	coord: 48..212
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 42..231
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 13..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 24..41
None	No IPR available	TMHMM	TMhelix		coord: 13..35
IPR036704	Ribonuclease E inhibitor RraA/RraA-like superfamily	SUPERFAMILY	89562	RraA-like	coord: 70..210

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-ischiensis_contig86	contig	S-ischiensis_contig86:340265..345447 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Schizocladia ischiensis KU_0333	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-ischiensis_contig86.20199.1	mRNA_S-ischiensis_contig86.20199.1	Schizocladia ischiensis KU_0333	mRNA	S-ischiensis_contig86 340112..345507 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-ischiensis_contig86.20199.1 ID=prot_S-ischiensis_contig86.20199.1|Name=mRNA_S-ischiensis_contig86.20199.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=232bp
MAHIPSKIARVRAGSAAAGAALAMGASVAATFAAGPALASGLLGSSPATA
DLMDHYQGDIPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQ
RLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDT
AEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADE
DGVVVSDRELRVPPDLAAAPERGGGAGRSKL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005493	RraA/RraA-like
IPR010203	RraA
IPR036704	RraA/RraA-like_sf