mRNA_S-ischiensis_contig86.20199.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig86.20199.1
Unique NamemRNA_S-ischiensis_contig86.20199.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A6H5KZP7_9PHAE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP7_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 5.860e-70
Identity = 119/183 (65.03%), Postives = 138/183 (75.41%), Query Frame = 1 
Query:  259 PALASGLLGSSPATADLMDHYQGDIPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRVPPDLAA 807
            P+L   +   +PATAD+MD Y GD     VQV  + +FRDYGG SRF GRV TVKCFENNPLVRQRLT+EDG G+VLVVDGGGS R ALMGD LA G ++ GW GVIINGAVRD++EI  L  FGCKAL + P KS+K  PGE  VPV F G+RF+ GQ+VYADEDG+VVSD  LRVP D +A
Sbjct:   10 PSLKGQVQDQAPATADIMDDYDGD-----VQVV-TNSFRDYGGVSRFCGRVETVKCFENNPLVRQRLTKEDGAGKVLVVDGGGSLRRALMGDQLAAGGLQNGWRGVIINGAVRDSSEIGKLP-FGCKALGTMPRKSEKKVPGEQGVPVEFGGLRFKAGQFVYADEDGIVVSDEPLRVPRDRSA 185
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A836C6L7_9STRA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6L7_9STRA)

HSP 1 Score: 218 bits (555), Expect = 9.520e-68
Identity = 113/168 (67.26%), Postives = 133/168 (79.17%), Query Frame = 1 
Query:  289 SPATADLMDHYQGDIPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRVP 792
            SPATAD+MDH+QG      VQVA S  FRDYGG  RFSG +ATV+C ENNPLVRQRLT+E G GRVLVVDGGGSTRCAL+GDMLA GAV+ GW+GVI++G +RD+A I+ L   G KA+ ++P KS K  PGEADVPVTFAG+ F PG +VYADEDG+VVS  EL +P
Sbjct:    9 SPATADIMDHFQGQ-----VQVAPSIGFRDYGGVRRFSGGIATVRCRENNPLVRQRLTKEAGGGRVLVVDGGGSTRCALLGDMLAAGAVQNGWAGVIVHGCIRDSAAIAQLP-LGVKAIGTNPTKSGKADPGEADVPVTFAGVVFTPGHWVYADEDGIVVSAIELALP 170
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A2V0NJW2_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NJW2_9CHLO)

HSP 1 Score: 187 bits (475), Expect = 5.540e-55
Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 1 
Query:  298 TADLMDHYQGD----IPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 789
            TADL D +  +    I    VQ+A  G FRD+GGR++FSG  +TV CFENNPLVR+ L  E GEGRVLVVD G S RCA++GD LA+ A + GWSG+I++G +RD+A I+ L   G KALA+HP KS K  PG  DVPVTFAG+  +PG +VYADEDG++V+  EL++
Sbjct:   66 TADLCDVHVPEPVDKISQRKVQIAQPGLFRDFGGRAKFSGPASTVLCFENNPLVRKALCDEKGEGRVLVVDAGASMRCAVLGDNLAESAQKNGWSGIIVHGCIRDSATIAALPNLGVKALATHPLKSSKRDPGFRDVPVTFAGVTIKPGDWVYADEDGILVAPHELKL 233
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A8J4C4G4_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4C4G4_9CHLO)

HSP 1 Score: 183 bits (465), Expect = 8.970e-54
Identity = 95/168 (56.55%), Postives = 119/168 (70.83%), Query Frame = 1 
Query:  298 TADLMDHYQGDIPDG----SVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 789
            TADL D Y  D  D     SVQ+     FRD+GG+ RFSG+  TVKC+ENNPLVR+ L  E G GRVLVVDGGGS RCAL+GDMLA+  V+ GWSG+I+NG +RD+A+I+ +   G KAL +HP KS K  PG+ DVPV+F G+   PG +VYAD DG++VS  EL +
Sbjct:   46 TADLTDKYLPDPVDTICTRSVQIVTPNLFRDFGGKLRFSGQATTVKCYENNPLVRKAL-EEPGIGRVLVVDGGGSLRCALLGDMLAENGVKNGWSGIIVNGCIRDSADIARMP-LGVKALGTHPLKSSKRDPGQRDVPVSFGGVTVSPGDWVYADGDGILVSKEELTL 211
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A0D2MXE5_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MXE5_9CHLO)

HSP 1 Score: 179 bits (453), Expect = 2.710e-52
Identity = 92/168 (54.76%), Postives = 117/168 (69.64%), Query Frame = 1 
Query:  298 TADLMDHYQGD----IPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 789
            TADL D +  +    I    VQ+A +G FRD+GGR +FSG+ +TV CFENNPLVR+ L  E G GRVLVVD GGS RCA++GD LA+ A   GWSG+I++G +RD+  I  L   G KALA+HP KS K  PG  DVPVTFAG+  +PG +VYAD DG++VS   L++
Sbjct:   21 TADLCDVFVPEPVDQITTRKVQIAHAGVFRDFGGRLKFSGQASTVSCFENNPLVRKAL-EEPGAGRVLVVDAGGSKRCAVLGDNLAESAQRNGWSGIIVHGCIRDSEAIGKLPNLGVKALATHPLKSSKRDPGLRDVPVTFAGVSIKPGDWVYADADGILVSPTPLKL 187
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A150GI59_GONPE (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax=Chlamydomonadales TaxID=3042 RepID=A0A150GI59_GONPE)

HSP 1 Score: 174 bits (441), Expect = 1.300e-50
Identity = 90/168 (53.57%), Postives = 116/168 (69.05%), Query Frame = 1 
Query:  298 TADLMDHYQGDIPDGSV----QVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 789
            TADL D Y  D  D +V    QV     FRD+GG+ RFSG+ +TVKC+ENNPL  +    E G GRVLVVDGGGS RCAL+GDMLA+  V+ GW+G+I+NG +RD+A+I+ +   G KAL +HP KS K  PG  DVPV+F G+   PG +VYAD DG++V+  EL +
Sbjct:   16 TADLTDKYLPDPVDATVNRAVQVVTPNLFRDFGGKLRFSGQASTVKCYENNPLALE----EPGRGRVLVVDGGGSLRCALLGDMLAENGVKNGWAGIIVNGCIRDSADIARMP-LGVKALGTHPLKSSKRDPGLRDVPVSFGGVTVAPGDWVYADGDGILVAKEELTL 178
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A7S0VJ91_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VJ91_9CHLO)

HSP 1 Score: 173 bits (438), Expect = 3.240e-50
Identity = 89/168 (52.98%), Postives = 116/168 (69.05%), Query Frame = 1 
Query:  298 TADLMDHYQGD----IPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 789
            TADL D Y  D    I    V++A    F +YGG  RFSG+  T+KC+ENNPLVR+ L  E G GRVLVVDGG S RCAL+GDMLA+  ++ GW G+I+NG +RD+ +IS + A G KALA++P KS K   G  +VPVTFAG+   PG+++YAD DG++VS  EL +
Sbjct:    9 TADLCDKYLTDPVDIIVQSDVRIA-EPLFSNYGGNKRFSGQAVTIKCYENNPLVRKMLMEEPGNGRVLVVDGGASKRCALLGDMLAEAGMKNGWKGIIVNGCIRDSEDISNM-AIGVKALATYPLKSSKRDTGLLNVPVTFAGVTISPGEWIYADLDGIIVSKLELTL 174
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A090M175_OSTTA (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M175_OSTTA)

HSP 1 Score: 174 bits (440), Expect = 3.990e-50
Identity = 95/171 (55.56%), Postives = 115/171 (67.25%), Query Frame = 1 
Query:  298 TADLMD-HYQGDIPD------GSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 789
            T+D+ D H+ G + D        V+VA +   +DYGG  RF G V+TV CFENNPLVR  L  E G GRVLVVDGGGS RCAL+GD LA+ A   GWSGVI+NG VRD+ +I+     G KA+ +HP KS K  PG  DVPVTFAG+ F PG YVYAD DG+VVS  +L +
Sbjct:   35 TSDICDVHHPGLVDDVIGTSASRVRVARANALKDYGGLRRFRGEVSTVLCFENNPLVRLAL-EEPGLGRVLVVDGGGSERCALLGDNLAETAARNGWSGVIVNGCVRDSEDIAKFNV-GVKAIGTHPLKSSKRDPGLRDVPVTFAGVTFVPGSYVYADADGIVVSPEKLEI 203
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: A0A5B8MPX1_9CHLO (4-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MPX1_9CHLO)

HSP 1 Score: 174 bits (442), Expect = 6.840e-50
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 1 
Query:  298 TADLMDHYQGDIPDG----SVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDRELRV 789
            TADL D +  D  D     +V+ A    FRDYG + RF G ++TVKCFENNPLVR+ L  E+G+GRVLVVD G STRCA++GDMLA+   + GW G+IING  RD+ +I  +   G KA+ +HP KS K  PG  DV V+FAG+ FRPG+YVYAD DGV+VS ++L +
Sbjct:   79 TADLCDVHMPDPVDAIVPRAVEAASVNYFRDYGSKRRFFGPISTVKCFENNPLVRKAL-EEEGKGRVLVVDAGASTRCAVLGDMLAEMGAKNGWEGIIINGCCRDSEDIGRMD-IGVKAIGTHPLKSSKRDPGLRDVDVSFAGVTFRPGEYVYADNDGVLVSRKKLEL 244
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BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Match: UPI001907F4AC (ribonuclease E activity regulator RraA n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI001907F4AC)

HSP 1 Score: 171 bits (433), Expect = 1.470e-49
Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 1 
Query:  298 TADLMDHYQGDIPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQRLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDTAEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADEDGVVVSDREL 783
            TADL+D Y+      SV+V     FRD+GG +RF GRV T+KCFE+N LV+  L  E G GRVLVVD GGS RCA++GD++A  AVE+GW+GVI++G +RD+ EI+ +   G KALA+HP KS K   G+ DVP+TFAG+RF PG  VY DEDG++VS+  L
Sbjct:   10 TADLVDQYEE-----SVRVCDP-LFRDFGGHTRFHGRVVTLKCFEDNSLVKATLA-EPGHGRVLVVDAGGSLRCAMLGDLIAGSAVEQGWAGVILHGCIRDSREIAAMP-LGVKALATHPRKSLKRGEGQRDVPITFAGVRFVPGDLVYCDEDGILVSEEAL 163
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig86.20199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZP7_9PHAE5.860e-7065.034-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A836C6L7_9STRA9.520e-6867.264-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A2V0NJW2_9CHLO5.540e-5555.954-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A8J4C4G4_9CHLO8.970e-5456.554-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax... [more]
A0A0D2MXE5_9CHLO2.710e-5254.764-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A150GI59_GONPE1.300e-5053.574-hydroxy-4-methyl-2-oxoglutarate aldolase n=3 Tax... [more]
A0A7S0VJ91_9CHLO3.240e-5052.984-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
A0A090M175_OSTTA3.990e-5055.564-hydroxy-4-methyl-2-oxoglutarate aldolase n=2 Tax... [more]
A0A5B8MPX1_9CHLO6.840e-5054.174-hydroxy-4-methyl-2-oxoglutarate aldolase n=1 Tax... [more]
UPI001907F4AC1.470e-4955.56ribonuclease E activity regulator RraA n=1 Tax=Thi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig86contigS-ischiensis_contig86:340112..345507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score188.0
Seed ortholog evalue5.1e-45
Seed eggNOG ortholog3067.XP_002949311.1
EggNOG free text desc.Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
EggNOG OGs2S32I@2759,34KHJ@3041,388N9@33090,COG0684@1
COG Functional cat.H
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionRibonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase
Ec32 orthologEc-13_002280.1
Exons4
Model size909
Cds size696
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig86.20199.1prot_S-ischiensis_contig86.20199.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig86 340265..345447 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817347.68453-UTR-S-ischiensis_contig86:340111..3402641622817347.68453-UTR-S-ischiensis_contig86:340111..340264Schizocladia ischiensis KU_0333UTRS-ischiensis_contig86 340112..340264 +
1695741045.932869-UTR-S-ischiensis_contig86:340111..3402641695741045.932869-UTR-S-ischiensis_contig86:340111..340264Schizocladia ischiensis KU_0333UTRS-ischiensis_contig86 340112..340264 +
1622817347.7474155-UTR-S-ischiensis_contig86:345447..3455071622817347.7474155-UTR-S-ischiensis_contig86:345447..345507Schizocladia ischiensis KU_0333UTRS-ischiensis_contig86 345448..345507 +
1695741045.9901383-UTR-S-ischiensis_contig86:345447..3455071695741045.9901383-UTR-S-ischiensis_contig86:345447..345507Schizocladia ischiensis KU_0333UTRS-ischiensis_contig86 345448..345507 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817347.6996949-CDS-S-ischiensis_contig86:340264..3403941622817347.6996949-CDS-S-ischiensis_contig86:340264..340394Schizocladia ischiensis KU_0333CDSS-ischiensis_contig86 340265..340394 +
1695741045.9452143-CDS-S-ischiensis_contig86:340264..3403941695741045.9452143-CDS-S-ischiensis_contig86:340264..340394Schizocladia ischiensis KU_0333CDSS-ischiensis_contig86 340265..340394 +
1622817347.7127054-CDS-S-ischiensis_contig86:340611..3407021622817347.7127054-CDS-S-ischiensis_contig86:340611..340702Schizocladia ischiensis KU_0333CDSS-ischiensis_contig86 340612..340702 +
1695741045.9557679-CDS-S-ischiensis_contig86:340611..3407021695741045.9557679-CDS-S-ischiensis_contig86:340611..340702Schizocladia ischiensis KU_0333CDSS-ischiensis_contig86 340612..340702 +
1622817347.7239625-CDS-S-ischiensis_contig86:341961..3421571622817347.7239625-CDS-S-ischiensis_contig86:341961..342157Schizocladia ischiensis KU_0333CDSS-ischiensis_contig86 341962..342157 +
1695741045.9655957-CDS-S-ischiensis_contig86:341961..3421571695741045.9655957-CDS-S-ischiensis_contig86:341961..342157Schizocladia ischiensis KU_0333CDSS-ischiensis_contig86 341962..342157 +
1622817347.7353427-CDS-S-ischiensis_contig86:345168..3454471622817347.7353427-CDS-S-ischiensis_contig86:345168..345447Schizocladia ischiensis KU_0333CDSS-ischiensis_contig86 345169..345447 +
1695741045.9760897-CDS-S-ischiensis_contig86:345168..3454471695741045.9760897-CDS-S-ischiensis_contig86:345168..345447Schizocladia ischiensis KU_0333CDSS-ischiensis_contig86 345169..345447 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig86.20199.1

>prot_S-ischiensis_contig86.20199.1 ID=prot_S-ischiensis_contig86.20199.1|Name=mRNA_S-ischiensis_contig86.20199.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=232bp
MAHIPSKIARVRAGSAAAGAALAMGASVAATFAAGPALASGLLGSSPATA
DLMDHYQGDIPDGSVQVAGSGTFRDYGGRSRFSGRVATVKCFENNPLVRQ
RLTREDGEGRVLVVDGGGSTRCALMGDMLAKGAVERGWSGVIINGAVRDT
AEISLLTAFGCKALASHPAKSQKVTPGEADVPVTFAGIRFRPGQYVYADE
DGVVVSDRELRVPPDLAAAPERGGGAGRSKL*
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mRNA from alignment at S-ischiensis_contig86:340112..345507+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig86.20199.1 ID=mRNA_S-ischiensis_contig86.20199.1|Name=mRNA_S-ischiensis_contig86.20199.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5396bp|location=Sequence derived from alignment at S-ischiensis_contig86:340112..345507+ (Schizocladia ischiensis KU_0333)
GAGGGCTTGCATTGGGCAGACCTTGGACGTCAAACGCGGAGAGCCTCGCT
TCGGTTCGCTCGTCAGGGTCGGGAGCCATACTAGCTTGAGTTCGCGGCGA
CCCTGGATCGTTCTTTGCCTGCGCGTGCGCCGTGCGGGACGGCAGCAAGA
AAGATGGCCCACATCCCAAGCAAGATCGCGCGGGTCCGTGCCGGGTCGGC
TGCCGCTGGGGCTGCGCTGGCGATGGGCGCGAGTGTGGCTGCGACGTTCG
CCGCTGGCCCTGCGCTGGCCTCTGGGCTCCTTGGTGAGCGTCACGCTGGC
CCACGTCTCACCCCACATAGTTGGTCCATCCGGTGACCCTACTGTAGTTA
TTGTCCAACGGCTTAACGTTAGTTTGTCCAAGTATCGAGTGCAACGTGCC
TGTGGACTACAGCAAGCACACTGTGACTACATGCACTTGTCGAGTACAGT
ATGCCTGTCAAATCTCGCCCCACCCACCACCGACCTACCCACCCACTCAG
GTTCCAGCCCAGCTACGGCAGACCTGATGGACCACTATCAAGGGGACATC
CCGGACGGCTCGGTGCAGGTGGCCGGCAGTGGCACTTTCAGGTGATGGCC
TCCATCAAGAGCGGGTACTTCCCAAGTACTTTCAAGTACACGTCTGTGGG
CTGCTGGTACTACTTGAATGAGGCACACTGTGCTGCTTACGAGGTTCGAG
GTAGTGACATGGCAGTTGCATGGCGGTTACACAGCGGGTACAAAGCAGTT
GCGAAGAGCCCTGGCGCAGCCAGCCTCCCCAACAACAGCATAGTGACACC
TACATCGCAGTTACGTCGACTGCGAATGGAAATTTCATGGCGGTCACATT
ACAGTTGCGAAGAGCCCTGGCCCAGTCGGCCTCCCGAACAAGTCTTCTGA
TATTTACAGTGTGCGCGGCAACCTACATTCTGGCGGCTACACGGCGGTTT
CGTCGCAGTTATGATGAGCCTGGCCGACACCAGGGTCATGGCGGTTACAC
GGCGGTTACGTTACAGTTATGGTGAGTCTGGCCGCAGCCAGGGTCCCCAG
CAGAGGAGACAATTTCCCTGGTATGTCCACGATGTCATGTCATGTCTAGC
TGCTGTAAAGTACCGTGTTACAGAACAGGAACAACACAGGGCGACGTGCA
GGCCTCGTCACTAAAGAACTCACAGCGGCCCTTCCTTGACTCACCAGGGA
ACATGTTTATGGGGAAGGGGAGGAGGGGGGGGGGGGGAAGGGGGGGTTGT
ATGGTAGAGTGCACATCATATGACACGTAGGGTTCCGCCTACGGGACACG
TGACCAGGGCCCATCCCGCTACAGCAAGCAACTCATGAACCCCCCACCTG
GGAGCGCTCTGGCCGAATAAATCGACCAGCCCCATTCCCTCGACCAATCA
CTTCCCGATACCCAAAAATATCAGCCAACCGTATCACTCATGCCCCCCCT
CCCGGTCTGACCAACGAATTGGACAGTCCCCGTCAATGATGTCAATCCAC
CAAACTGCTGCCACCCACCCAAACATTCCGGCTCATCGAAGTCACTCGGG
GAGTGCCCACTTGTACGTACTTCATATTTACCCCCCGCCTCCCCTCCCCC
CCTTGAATTGACCCAACCCCATCTTCTCACCCTGAGAACTCCGCCCACTT
CTACATCTCAACCAACCAAATCACTCAGGGACTAATGCGGTGGGCGGAAC
TGCTTCAGCGGTCAGGTGGCCATGTTCAAGTGAAAAATCGCGAGACTCCC
CCCCGCGCGCGCTCGTGCCAATGACCTCGACCGAACCAGGTCCCCTACAC
CAATGACCTCCACTCGCCCGACCATTCCGTCCAACTACAAATCGCTCCAG
GGACTACGGCGGGCGGAGCCGCTTCAGCGGCCGCGTGGCAACTGTCAAGT
GCTTTGAAAACAACCCGCTGGTGCGGCAGCGCCTCACGAGGGAGGACGGG
GAGGGGCGCGTGCTGGTGGTTGACGGCGGGGGCTCCACACGGTGCGCCCT
CATGGGCGACATGCTGGCAAAGGGGGCCGTGGAGCGGGGGTGGAGCGTGA
GTGCATATGATGTACTATTATTTGCGGAATACTTCATCAAGAAGAGAGAG
GTTTACGGCGAGCCATGCAGCTATTAACATTTGGAAAATACTTTCAAGTA
GCGCAGAAGTCGCCACTTTTCAAAGCAAATGCCAAAAGACGACCAACCCG
GAAGGGCGGAAGAAAAATCGACTGCTGTAGTCGACTTTTGGGTGATTTAT
GTCATGCTATCTCCACCCTGCCACCAACCCGAACTGCAGCCCGATTCAAT
GAGTTAGAAATCACCTCCAACCAACCCCGAACTCTAGCCCAAACCTAAAC
ACATGTATGTGCGAGTGCAGTCCGGCCCCCTGTGTTGGCTAAGGCAGTCC
AAACCCCTATGTTCGCTATTGCGGGTCCGAAACCCTGTGTCCACTACTAG
TATTGCAGTGTGGTGATCCTTTGCGATACGCTACCGTAATCGCCCTCCGG
GTAAGGCGTCGCGGATTCTACCAGATAGTCGGCTTTTGTTAAGAAAAAAT
GTCCAGAAAGCAGTGGACTTTCTTCCCGGAAGTCGACTTTTGCCATCGAA
TTCGCCAGGTAGTCGGCTTTAGTCATTTTCCATGTTAAAAATTAGTTTCC
CCTCTATGTTCAACTGTTTGGGCGTGCGTACGCATTGCAGTACTCGAGTA
TGATACATACTTGAAGTAGGAAGTTGAGGCAGAGATGCTGCTGTCAACTT
TCCCCCTCTACCAGTGTATTGAGCTTGGGCATGCGTAAGCATTGTAGTGT
GATACACACTTGAAGAAGAAGAGAGAAGAAGAAGTGAGAACTCGCACGCC
ATCCAACACAGTTGATATGAAAGAAGTGAGGCAGAGGTTCCATTGTGCTA
CATACTAAATCAGCCGGCATTTATTTGTTTTCGTAGCAATCTTCCAGCGA
GGTCCGGGCCTTCCCGAAACGAGGACCTCATCAGAAGAGTTAACCCTTCA
TTCCCTCGCTAGTGTGATGTGATGTGCACTCTAATTTACTGTAGTGTGAC
ATCACATCACATCACCTCAAAACTGGGGACCTCATCAGAAAAGTTAACCC
TTCATTCCCTCGCGGGGCGGAAGGAAATCCAACAAGAAAGGAGAGGATGG
GGGCAGGGAAGGGAGAGTATCTATGTGTACGCACCTTGTGATGTGATGGG
ATGTGATGTGCACTCCAACATACTGTAGTTTGACATCACATCACATTGCA
CCAGAAAAAAAAGTGACAAGAAAGGAGATGCCGGGGGGCGGGGAAGGGAG
AGGCTCTTGTACTCAACCGTGGGTAGGCGCGAGCGAAGCTGGCAAGCAAC
ACCGAATGATTTGCCCACCGGAGAGGGCACAAGGGGAGGAAGCATGAGCG
GGCGCCGCAGTGGTTACCGCGCCCCTGTAAGCATATTGGAGGATATTGGC
GGTACGTGTACCCCGGGTACAACGTAGAAAGCCAACCCGCACCGCACCGC
ACCCATCCGAACCGGTGGAAACGACATTTTTTCTCAAGACACGACTTTGT
TTCTCAAGGCGCCCACTGCGCGGGTCGATTTTATTGCATACTACATAGTA
TACATATGTAGGAATCAACGTTTTCTGAACTGCTGGAATATCACCCAACG
GTGAGTGACTCCGAAGAATCAGTACGGTAGTACTACCATGTTTTTGTTTG
TTTAACTTTACAGTCTCCAAACATGGCTGCCATGTGTTGCAGCACAGCAC
CAGACTGCTGATACAATTCATCCGACAAGCACCGCCACAAGCACGACAAC
CCACACAAACGCCCATGGCGGCCAGCCCACATGCGTGCAAAAACACGAAA
CACTAAACACAAACGAAAAACCCTCGTACCGGTACAATTTTGTCGGAAAG
GTGTCGATATGATGTGATGTCATGTCAAACCTTCGTGCATTAGAGTACAC
AAGAGACTTCCCTTCCCCGCCCCTATTATTCTTTCTTCTTGTTGTTTTCC
CTCCTGTCCTGCGAGGGAATGAAGGGCTTCCGTTGAGTCCTATTTTGGGA
CGAGCCTTTCGGCACGGGGCCCGGCACTCGCCGCCTATCAAATTCAAGTA
CACATTACCTCAAATAACATTGAATGCTGAATCCCTCCCGCGGCATTTGC
CGGAGAGGTAACGATGTCATGGTATGTCATGTGATGCGGTGTCAAACCAT
ACTATATACATTGGAGTACATACACATCACATCAGATCACAAGAAAATAC
CAAGTGTTGTTGGAGAGATCGATCTTGCCACCCCGTGCCAAAAGCCGGTC
GGATTCGCGAACGCGGGAAAACTCGGAACAGTCCCCCAAGTGCAACGATT
GGGAACTGGAGAGGAATTGTTGCGAGGTATTTCAGGGCAATGCAGGGCCC
AACAAATAGAGGGTGAGAACTATGTAGTCTCGCAAATGTCATCCCCGCGG
GGCAACATCTCTCCGACAAATACAGTACTTCCAAGCACTTAACCCTTGGA
CCCCCGGGAGAGTGTACACACCCACTACTGTAGATTCCTATAGTTCCGTG
TACATCTGGGGCAGAAGGGCCGAGTGAAAGAAGGGTTACCTCTTCTGGTC
AAGTCCTCACCTTGGGTATTGGGACGCGGCCCGGCACTCGCATGCCATCA
CGATAATTCATAAACAATGCAGTACATAACCCTTTTACCCCTGCTAAATC
GGACTTCCACACTAAAACCCTATGATTGTACGGACCCCAGGGGTAAAAGG
GTTGCGTATGCGCTCGTATGTATCGCACTCGTACAGTACAGCGCTTACCT
ACTTACAGTAGTGCTTCCTAGGGCTTGCACTATACCGGGAGTACTGCGCT
TGTGTATGGGTGCTCGTAGAACTTGACAGCAAAACCGCTGCCGCTTCCCG
CGTCTCCTTTCTCACATCACTGCTGCTGCGCCGATTCGCATCGCATCACC
ATGTTTCGTGGTTTTCGTGTGCTTTCCCCCCTCTTTTCTTTCTTCTTTTT
GCTCCTTGTTTCCCCTATTTGTTTCCCCCTTTTTGGGGGGGGGGGGTCGC
ATTGCAGGGCGTCATCATCAACGGCGCGGTCCGCGACACGGCCGAGATCT
CCCTCCTCACAGCCTTTGGCTGCAAGGCCCTGGCCTCCCACCCGGCCAAG
AGCCAGAAGGTGACACCTGGGGAGGCGGACGTGCCCGTCACCTTTGCCGG
GATCCGCTTCCGGCCCGGGCAGTACGTCTACGCTGACGAGGACGGTGTGG
TTGTGTCCGACCGGGAGCTGAGGGTCCCACCGGACCTGGCAGCGGCGCCC
GAGCGGGGGGGGGGTGCAGGGCGGTCCAAGCTGTGAATAGTTGATGGAAG
TGTACAGTAAAGCGATATTGTGTACACACACACGTCATCAATCAGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig86:340112..345507+

>mRNA_S-ischiensis_contig86.20199.1 ID=mRNA_S-ischiensis_contig86.20199.1|Name=mRNA_S-ischiensis_contig86.20199.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1392bp|location=Sequence derived from alignment at S-ischiensis_contig86:340112..345507+ (Schizocladia ischiensis KU_0333)
ATGGCCCACATCCCAAGCAAGATCGCGCGGGTCCGTGCCGGGTCGGCTGC
CGCTGGGGCTGCGCTGGCGATGGGCGCGAGTGTGGCTGCGACGTTCGCCG
CTGGCCCTGCGCTGGCCTCTGGGCTCCTTGATGGCCCACATCCCAAGCAA
GATCGCGCGGGTCCGTGCCGGGTCGGCTGCCGCTGGGGCTGCGCTGGCGA
TGGGCGCGAGTGTGGCTGCGACGTTCGCCGCTGGCCCTGCGCTGGCCTCT
GGGCTCCTTGGTTCCAGCCCAGCTACGGCAGACCTGATGGACCACTATCA
AGGGGACATCCCGGACGGCTCGGTGCAGGTGGCCGGCAGTGGCACTTTCA
GGTTCCAGCCCAGCTACGGCAGACCTGATGGACCACTATCAAGGGGACAT
CCCGGACGGCTCGGTGCAGGTGGCCGGCAGTGGCACTTTCAGGGACTACG
GCGGGCGGAGCCGCTTCAGCGGCCGCGTGGCAACTGTCAAGTGCTTTGAA
AACAACCCGCTGGTGCGGCAGCGCCTCACGAGGGAGGACGGGGAGGGGCG
CGTGCTGGTGGTTGACGGCGGGGGCTCCACACGGTGCGCCCTCATGGGCG
ACATGCTGGCAAAGGGGGCCGTGGAGCGGGGGTGGAGCGGACTACGGCGG
GCGGAGCCGCTTCAGCGGCCGCGTGGCAACTGTCAAGTGCTTTGAAAACA
ACCCGCTGGTGCGGCAGCGCCTCACGAGGGAGGACGGGGAGGGGCGCGTG
CTGGTGGTTGACGGCGGGGGCTCCACACGGTGCGCCCTCATGGGCGACAT
GCTGGCAAAGGGGGCCGTGGAGCGGGGGTGGAGCGGCGTCATCATCAACG
GCGCGGTCCGCGACACGGCCGAGATCTCCCTCCTCACAGCCTTTGGCTGC
AAGGCCCTGGCCTCCCACCCGGCCAAGAGCCAGAAGGTGACACCTGGGGA
GGCGGACGTGCCCGTCACCTTTGCCGGGATCCGCTTCCGGCCCGGGCAGT
ACGTCTACGCTGACGAGGACGGTGTGGTTGTGTCCGACCGGGAGCTGAGG
GTCCCACCGGACCTGGCAGCGGCGCCCGAGCGGGGGGGGGGTGCAGGGCG
GTCCAAGCTGTGAGGCGTCATCATCAACGGCGCGGTCCGCGACACGGCCG
AGATCTCCCTCCTCACAGCCTTTGGCTGCAAGGCCCTGGCCTCCCACCCG
GCCAAGAGCCAGAAGGTGACACCTGGGGAGGCGGACGTGCCCGTCACCTT
TGCCGGGATCCGCTTCCGGCCCGGGCAGTACGTCTACGCTGACGAGGACG
GTGTGGTTGTGTCCGACCGGGAGCTGAGGGTCCCACCGGACCTGGCAGCG
GCGCCCGAGCGGGGGGGGGGTGCAGGGCGGTCCAAGCTGTGA
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