prot_S-ischiensis_contig84.20102.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20102.1
Unique Nameprot_S-ischiensis_contig84.20102.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length78
Homology
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BLAST of mRNA_S-ischiensis_contig84.20102.1 vs. uniprot
Match: A0A6H5L016_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L016_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 5.460e-12
Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0 
Query:   15 GFDGTPLRAEDVQVLVGEPAALQPLDEPDRDLGPRAGDVVTSYDDLVFAAASLVVFLGPQEPPS 78
            GF+  PL    + + + +P A+   + P  DLGPRAGD+V S +DLVFAAAS +VFLGP  PP+
Sbjct:   97 GFEAPPLDPAKLHLRLRQPCAVPAQEHPSMDLGPRAGDIVASVEDLVFAAASAMVFLGPNPPPT 160
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BLAST of mRNA_S-ischiensis_contig84.20102.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 9.230e-11
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0 
Query:   15 GFDGTPLRAEDVQVLVGEPAALQPLDEPDRDLGPRAGDVVTSYDDLVFAAASLVVFLGPQEPP 77
            GF+   L    + + + +P A+   + P  DLGPRAGD+V S +DLVFAAAS +VFLGP  PP
Sbjct: 3320 GFEAPSLDPAKLHLRLRQPCAVPAQEHPSMDLGPRAGDIVASVEDLVFAAASAMVFLGPNPPP 3382
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L016_9PHAE5.460e-1250.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8Y9_ECTSI9.230e-1149.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:664217..664581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20102.1mRNA_S-ischiensis_contig84.20102.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 664217..664581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20102.1 ID=prot_S-ischiensis_contig84.20102.1|Name=mRNA_S-ischiensis_contig84.20102.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=78bp
VGRPRGRSGRGSKWGFDGTPLRAEDVQVLVGEPAALQPLDEPDRDLGPRA
GDVVTSYDDLVFAAASLVVFLGPQEPPS
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