prot_S-ischiensis_contig84.20090.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20090.1
Unique Nameprot_S-ischiensis_contig84.20090.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length204
Homology
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: A0A6H5KKF1_9PHAE (VPS13 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF1_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 1.230e-27
Identity = 64/134 (47.76%), Postives = 84/134 (62.69%), Query Frame = 0
Query:    7 LLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLLIFGMEGPEPTPA-ATQDQGPGLTLDSSPRQS 139
            L+  ++ VEAV+L +  RQY VLN  +SA  MS RRF+FR +RPT +VL+DP+AWW YA RCV  E R  A +G+AG +L W G I   +  +RYM +YRRLL  GM     T A AT    P  T  ++P +S
Sbjct:  383 LVSVSLDVEAVALQVDVRQYAVLNAAVSALTMSHRRFKFRTMRPTTSVLDDPEAWWRYAIRCVMIEQRRDAHRGSAGPSLTWQGLISRVRLLSRYMSVYRRLLTVGMRPLHATTARATAAPAPVTTARNTPPRS 516          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.730e-27
Identity = 64/134 (47.76%), Postives = 84/134 (62.69%), Query Frame = 0
Query:    7 LLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLLIFGMEGPEPTPA-ATQDQGPGLTLDSSPRQS 139
            L+  ++ VEAV+L +  RQY VLN  +SA  MS RRF+FR +RPT +VL+DP+AWW YA RCV  E R  A +G+AG +L W G I   +  +RYM +YRRLL  GM     T A AT    P  T  ++P +S
Sbjct:  438 LVSVSLDVEAVALQVDVRQYAVLNAAVSALTMSHRRFKFRTMRPTTSVLDDPEAWWRYAIRCVMIEQRRDAHRGSAGLSLTWQGLISRVRLLSRYMSVYRRLLTVGMRPLHATTAPATAAPAPVTTARNTPPRS 571          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: A0A452YV23_AEGTS (VPS13 domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452YV23_AEGTS)

HSP 1 Score: 61.6 bits (148), Expect = 7.690e-8
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    4 GHALLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLLIFGMEGP 116
            G AL  AAV ++ V+L LS   Y  +       +   +R R+   RP+  V  DP AWW YA++ VT E++ A+       +L+W   +  A+ +  Y+ LY  LL   M  P
Sbjct:   44 GQALQNAAVDLDDVTLSLSKDGYRDILKMADNFSSFNQRLRYAHYRPSLPVKSDPKAWWKYAYKVVTHEMKKAS------GSLSWEQLLRNARLRKTYVSLYASLLKSDMSRP 150          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: A0A452YV27_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452YV27_AEGTS)

HSP 1 Score: 61.6 bits (148), Expect = 1.240e-7
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    4 GHALLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLLIFGMEGP 116
            G AL  AAV ++ V+L LS   Y  +       +   +R R+   RP+  V  DP AWW YA++ VT E++ A+       +L+W   +  A+ +  Y+ LY  LL   M  P
Sbjct:  269 GQALQNAAVDLDDVTLSLSKDGYRDILKMADNFSSFNQRLRYAHYRPSLPVKSDPKAWWKYAYKVVTHEMKKAS------GSLSWEQLLRNARLRKTYVSLYASLLKSDMSRP 375          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: M8C884_AEGTA (PH domain-containing protein n=1 Tax=Aegilops tauschii TaxID=37682 RepID=M8C884_AEGTA)

HSP 1 Score: 61.6 bits (148), Expect = 1.470e-7
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    4 GHALLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLLIFGMEGP 116
            G AL  AAV ++ V+L LS   Y  +       +   +R R+   RP+  V  DP AWW YA++ VT E++ A+       +L+W   +  A+ +  Y+ LY  LL   M  P
Sbjct:  276 GQALQNAAVDLDDVTLSLSKDGYRDILKMADNFSSFNQRLRYAHYRPSLPVKSDPKAWWKYAYKVVTHEMKKAS------GSLSWEQLLRNARLRKTYVSLYASLLKSDMSRP 382          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: A0A3B5Y0E0_WHEAT (Uncharacterized protein n=40 Tax=Triticeae TaxID=147389 RepID=A0A3B5Y0E0_WHEAT)

HSP 1 Score: 61.6 bits (148), Expect = 1.510e-7
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    4 GHALLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLLIFGMEGP 116
            G AL  AAV ++ V+L LS   Y  +       +   +R R+   RP+  V  DP AWW YA++ VT E++ A+       +L+W   +  A+ +  Y+ LY  LL   M  P
Sbjct:  276 GQALQNAAVDLDDVTLSLSKDGYRDILKMADNFSSFNQRLRYAHYRPSLPVKSDPKAWWKYAYKVVTHEMKKAS------GSLSWEQLLRNARLRKTYVSLYASLLKSDMSRP 382          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: A0A1D6P6R2_MAIZE (Pleckstrin homology (PH) domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6P6R2_MAIZE)

HSP 1 Score: 58.9 bits (141), Expect = 3.160e-7
Identity = 34/106 (32.08%), Postives = 54/106 (50.94%), Query Frame = 0
Query:    4 GHALLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLL 109
            G AL   AV ++ V+L LS   Y  +       +   +R R+  LRP+  +  DP AWW YA++ VT E++ A+ +      L+W   +  A+ +  Y+ LY  LL
Sbjct:   77 GQALQNTAVDLDDVTLSLSKDGYRDMLKLADNFSTFNQRLRYAHLRPSSPLKSDPRAWWKYAYKVVTQEMKKASGR------LSWEQLLRNARLRKTYVSLYASLL 176          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: A0A5J9V822_9POAL (PH domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V822_9POAL)

HSP 1 Score: 59.7 bits (143), Expect = 6.810e-7
Identity = 35/106 (33.02%), Postives = 55/106 (51.89%), Query Frame = 0
Query:    4 GHALLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLL 109
            G AL  AAV ++ V+L LS   Y  +       +   +R R+  LRP+  V  DP AWW YA++ VT E++ A+       +++W   +  A+ +  Y+ LY  LL
Sbjct:  276 GQALQNAAVDLDDVTLSLSKDGYRDILKMADNFSSFNQRLRYAHLRPSLPVKLDPRAWWKYAYKVVTREMKKAS------GSISWEQLLRNARLRKTYVSLYASLL 375          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: A0A1D6P6R3_MAIZE (Pleckstrin homology (PH) domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6P6R3_MAIZE)

HSP 1 Score: 58.9 bits (141), Expect = 1.240e-6
Identity = 34/106 (32.08%), Postives = 54/106 (50.94%), Query Frame = 0
Query:    4 GHALLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLL 109
            G AL   AV ++ V+L LS   Y  +       +   +R R+  LRP+  +  DP AWW YA++ VT E++ A+ +      L+W   +  A+ +  Y+ LY  LL
Sbjct:  288 GQALQNTAVDLDDVTLSLSKDGYRDMLKLADNFSTFNQRLRYAHLRPSSPLKSDPRAWWKYAYKVVTQEMKKASGR------LSWEQLLRNARLRKTYVSLYASLL 387          
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Match: A0A2I0VED0_9ASPA (PH domain-containing protein n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VED0_9ASPA)

HSP 1 Score: 56.6 bits (135), Expect = 6.830e-6
Identity = 35/107 (32.71%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    4 GHALLEAAVWVEAVSLMLSTRQY-EVLNGGLSAAAMSRRRFRFRRLRPTKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQARYMHLYRRLL 109
            G AL +A + ++ V+L LS   + ++L    + AA ++R  ++   RP   V  DP AWW YA++ VT E++ A+ +      L+W   +  A  + RY+ LY  LL
Sbjct:  278 GQALQQAVINLDDVTLCLSKDGFRDILKLADNFAAFNQR-LKYAHYRPQVPVKSDPRAWWTYAYKVVTDEMKKASGK------LSWEDVLRYASIRKRYLSLYASLL 377          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KKF1_9PHAE1.230e-2747.76VPS13 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G8Y9_ECTSI1.730e-2747.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A452YV23_AEGTS7.690e-832.74VPS13 domain-containing protein n=1 Tax=Aegilops t... [more]
A0A452YV27_AEGTS1.240e-732.74Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
M8C884_AEGTA1.470e-732.74PH domain-containing protein n=1 Tax=Aegilops taus... [more]
A0A3B5Y0E0_WHEAT1.510e-732.74Uncharacterized protein n=40 Tax=Triticeae TaxID=1... [more]
A0A1D6P6R2_MAIZE3.160e-732.08Pleckstrin homology (PH) domain-containing protein... [more]
A0A5J9V822_9POAL6.810e-733.02PH domain-containing protein n=1 Tax=Eragrostis cu... [more]
A0A1D6P6R3_MAIZE1.240e-632.08Pleckstrin homology (PH) domain-containing protein... [more]
A0A2I0VED0_9ASPA6.830e-632.71PH domain-containing protein n=1 Tax=Dendrobium ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031646Vacuolar protein sorting-associated protein 13, second N-terminal domainPFAMPF16908VPS13coord: 8..106
e-value: 4.9E-14
score: 52.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:648268..649882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20090.1mRNA_S-ischiensis_contig84.20090.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 648268..649883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20090.1 ID=prot_S-ischiensis_contig84.20090.1|Name=mRNA_S-ischiensis_contig84.20090.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=204bp
HGHGHALLEAAVWVEAVSLMLSTRQYEVLNGGLSAAAMSRRRFRFRRLRP
TKAVLEDPDAWWHYAFRCVTSELRGAARQGTAGSTLNWAGAIDGAKFQAR
YMHLYRRLLIFGMEGPEPTPAATQDQGPGLTLDSSPRQSPGPGAPPLGAK
GLGPASAASPRGQERFSPPGGGTGGYSLPLGRGGGGGGSGGLEGRGGGGS
TSPG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031646VPS13_N2