prot_S-ischiensis_contig84.20089.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20089.1
Unique Nameprot_S-ischiensis_contig84.20089.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length247
Homology
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 1.190e-55
Identity = 112/206 (54.37%), Postives = 137/206 (66.50%), Query Frame = 0
Query:    1 MNPSRRLAKWLGGHLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPLGSVMYDQDIEDAIRATIFERKQAKLARAEVRLAGGRKKPGWGARLVSGLAGSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGD---PPRDSCAVGVYLGSFRVYP 203
            MN  R + +WL G L +YV NVD +SL  GLWSGDL L DL++R+D+ RKL LPVVL+QGSV  + I+VPWK+F S +AS+ VS +TLVLEPLGS  YD +IE  +R  IF +KQ  LA AE +LAG R K GWGAR  S LA SF+AR+VR +SV VE VH++W Q   A Q      PL  +   P     AVGVYLG   V P
Sbjct:    1 MNLFRVIPQWLAGKLSEYVHNVDFDSLGAGLWSGDLVLRDLQVRTDVSRKLHLPVVLKQGSVDLVRIQVPWKSFGSMKASLQVSGLTLVLEPLGSANYDDEIERGLRDAIFAKKQELLANAEAQLAGVRAKAGWGARFGSFLASSFMARIVRKLSVTVENVHVVWLQAEHA-QTSPVQSPLSAEETCPAPSPSAVGVYLGRLSVTP 205          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: A0A6H5KKF1_9PHAE (VPS13 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF1_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.900e-29
Identity = 74/145 (51.03%), Postives = 88/145 (60.69%), Query Frame = 0
Query:   61 SVGTLHIKVPWKTFASGRASVVVSDVTLVLEPLGSVMYDQDIEDAIRATIFERKQAKLARAEVRLAGGRKKPGWGARLVSGLAGSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGD--PPRDSCAVGVYLGSFRVYP 203
            S    ++KVPWK+F   +AS+ VS VTLVLEPLGS  YD  IE  +R  IF +KQ  LA AE +LAG   K GWGAR  S LA SF+AR+VR +SV VE VH++W Q   A Q      PL  +  P     AVGVYLG   V P
Sbjct:    4 SASAANVKVPWKSFGRMKASLQVSGVTLVLEPLGSANYDDKIERGLRDAIFAKKQELLANAEAQLAGVGAKAGWGARFGSFLASSFMARIVRKLSVTVENVHVVWLQAEHA-QTSPVQSPLSAETCPAPSPSAVGVYLGRLSVAP 147          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: A0A835Z9T2_9STRA (Vacuolar protein sorting-associated protein 13A N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T2_9STRA)

HSP 1 Score: 112 bits (280), Expect = 2.700e-28
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    1 MNPSRRLAKWLGGHLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEP 92
            MN S++LA  L   L +YV+NVD++SLQ GLW+GDLQL +L +R D  RK +LPVVL+ GSVGT+ +KVPWK+F SG  ++VVSD+ +VLEP
Sbjct:    1 MNLSKKLANVLARTLGEYVQNVDEDSLQVGLWAGDLQLKNLELRPDALRKAELPVVLRSGSVGTVRLKVPWKSFGSGGVALVVSDLKVVLEP 92          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: UPI001929EE66 (putative vacuolar protein sorting-associated protein 13F n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929EE66)

HSP 1 Score: 92.0 bits (227), Expect = 7.930e-18
Identity = 63/235 (26.81%), Postives = 108/235 (45.96%), Query Frame = 0
Query:    7 LAKWLGGHLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPLGSVMYDQDIEDAIRATIFERKQAKLARAEVRLAGGRKKPGWGARLVSGLAGSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGDPPRDSCAVGVYLGSFRVYPEAEGQNPRGPAD---TNARKALELSGLCLYTKDSTLDW 238
            L K+LG    +YVE + +E+L+  +W GD+ L DL+++++    L+LPV ++ G VGT+ +KVPWK+       V++  V L+  P       Q ++D  R  +FE K  ++  AE+ +   R+       + +   GS +A ++ N+ V +  VHI +  +             + +P    C  GV L         E  N    A       RK+++L  L  Y    +  W
Sbjct:   10 LRKYLG----EYVEGLSNEALRISVWKGDVVLKDLKLKAEALNNLKLPVTVKAGFVGTITLKVPWKSLGKEPVVVLIDRVFLLAHPAPD---GQSLKDEDRERLFEAKLQQIEEAELAIIEARRTKAGAPPVGNSWLGSLIATIIGNLKVSISNVHIRYEDS-------------ISNPGHPFCC-GVTLSKLAAVTTDELGNETFDASGALDKLRKSVQLQRLAAYHDSDSTPW 223          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: A0A2I0AQG3_9ASPA (Uncharacterized protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AQG3_9ASPA)

HSP 1 Score: 92.0 bits (227), Expect = 1.710e-17
Identity = 70/236 (29.66%), Postives = 112/236 (47.46%), Query Frame = 0
Query:   14 HLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPL--GSVMYDQDIEDAIRATIFERKQAKLARAEVRLAGGRKKPGWGARLVSGLA--GSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGDPPRDSCAVGVYLGSFR-VYPEAEGQ---NPRGPADTNARKALELSGLCLYTKDSTLDWCTD 241
            +L +YVE +  E+L+  +W GD+ L DLR++ D    L+LPV ++ G VGT+ +KVPWK+       VV+  V ++ EP+  G  + DQD     R  +F+ K  ++  AE  +     +      + SG +  GS VA ++ N+ V +  VHI +  +             V +P    C+ G+ L     V  + EG    +  G  D   RK+L+L  L +Y       W  D
Sbjct:   13 YLDEYVEGLSIEALRISVWKGDVLLKDLRLKPDALNSLKLPVAVKAGFVGTITLKVPWKSLGKEPVVVVIDRVFVLAEPVPDGQTLKDQD-----REKLFDSKLQQIEDAESAIIEATIRNDKSGAVPSGNSWLGSLVATIIGNLKVTISNVHIRYEDS-------------VSNPGHPFCS-GITLSKLAAVTTDEEGNETFDTSGALD-KLRKSLQLERLAMYHDSDCAPWTLD 228          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: A0A4S8IEM8_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8IEM8_MUSBA)

HSP 1 Score: 90.1 bits (222), Expect = 7.800e-17
Identity = 67/239 (28.03%), Postives = 113/239 (47.28%), Query Frame = 0
Query:    7 LAKWLGGHLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPL--GSVMYDQDIEDAIRATIFERKQAKLARAEV-RLAGGRKKPGWGARLVSGLAGSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGDPPRDSCAVGVYLGSFRVYPEAEGQNPR----GPADTNARKALELSGLCLYTKDSTLDW 238
            L K+LG    +YVE +  E+L+  +W GD+ L DL+++++    L+LPV+++ G VGT+ +KVPWK+       V++  V L+  P+  G  + D+D E   +A + + ++ +LA  E  R +     PG  + L     GS +A ++ N+ V +  VHI +                + +P    C  G  L     +   E  N      G  D   RK+L+L  L +Y    +  W
Sbjct:   10 LRKYLG----EYVEGLSVEALRISVWKGDVVLKDLKLKAEALNSLRLPVIVKAGFVGTITLKVPWKSLGKEPVIVLIDRVFLLAHPVPDGQTLRDEDREKLFQAKLQQIEELELATIEATRRSRTGSAPGGSSWL-----GSLIATIIGNLKVTISNVHIRYEDT-------------ISNPGHPFC-TGFTLSKLAAFTMDEQGNETFDTSGALD-KLRKSLQLERLAIYHDSDSFPW 224          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: A0A7J7MNU4_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MNU4_9MAGN)

HSP 1 Score: 89.0 bits (219), Expect = 1.730e-16
Identity = 68/240 (28.33%), Postives = 114/240 (47.50%), Query Frame = 0
Query:    7 LAKWLGGHLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPLGSVMYDQDIEDAIRATIFERKQAKLARAEVRLAGGRKKPGWGARLV-SGLAGSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGDPPRDSCAVGVYLGSFRVYPEAEGQNPR----GPADTNARKALELSGLCLYTKDSTLDWCTD 241
            L K+LG    +YV  +  E+L+  +W GD+ L DL+++++    L+LPV ++ G VGT+ +KVPWK+       V++  V ++  P     Y Q +++  R  +FE K  ++  AE+     + +   G   V +   GS +A ++ N+ + +  VHI + ++ V+ Q         G P     A GV L         E  N      G  D   RK+L+L  L +Y    +L W  D
Sbjct:   48 LRKYLG----EYVHGLSAEALRISVWKGDVVLKDLKLKAEALNSLKLPVTVKAGFVGTITLKVPWKSLGKEPVIVLIDRVFILAHP---APYGQTLKEEDREKLFEAKLQRIEEAELATLEAKARSKLGNPPVGNSWLGSLIATIIGNLKISISNVHIRY-EDTVSNQ---------GHP----FASGVTLARLAAVTMDEQGNETFDTSGALD-KLRKSLQLERLAVYHDSGSLPWKMD 265          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: A0A804KGW1_MUSAM (Peroxin/Ferlin domain-containing protein n=3 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KGW1_MUSAM)

HSP 1 Score: 89.0 bits (219), Expect = 1.940e-16
Identity = 66/239 (27.62%), Postives = 113/239 (47.28%), Query Frame = 0
Query:    7 LAKWLGGHLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPL--GSVMYDQDIEDAIRATIFERKQAKLARAEV-RLAGGRKKPGWGARLVSGLAGSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGDPPRDSCAVGVYLGSFRVYPEAEGQNPR----GPADTNARKALELSGLCLYTKDSTLDW 238
            L K+LG    +YVE +  E+L+  +W GD+ L DL+++++    L+LPV+++ G VGT+ ++VPWK+       V++  V L+  P+  G  + D+D E   +A + + ++ +LA  E  R +     PG  + L     GS +A ++ N+ V +  VHI +                + +P    C  G  L     +   E  N      G  D   RK+L+L  L +Y    +  W
Sbjct:   10 LRKYLG----EYVEGLSVEALRISVWKGDVVLKDLKLKAEALNSLRLPVIVKAGFVGTITLRVPWKSLGKEPVIVLIDRVFLLAHPVPDGQTLRDEDREKLFQAKLQQIEEMELATIEATRRSRTGSAPGGNSWL-----GSLIATIIGNLKVTISNVHIRYEDT-------------ISNPGHPFC-TGFTLSKLAAFTMDEQGNETFDTSGALD-KLRKSLQLERLAIYHDSDSFPW 224          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: A0A6D2K1T7_9BRAS (C2 domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K1T7_9BRAS)

HSP 1 Score: 87.8 bits (216), Expect = 4.820e-16
Identity = 63/231 (27.27%), Postives = 109/231 (47.19%), Query Frame = 0
Query:   14 HLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPL--GSVMYDQDIEDAIRATIFERKQAKLARAEVRLAGGRKKPGWGARLVSGLAGSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGDPPRDSCAVGVYLGSFR-VYPEAEGQ---NPRGPADTNARKALELSGLCLYTKDSTLDW 238
            +L +YV  +  E+L+  +W GD+ L DL+++++    L+LPV ++ G VGT+ +KVPWK+       V++  V ++  P   G  + ++D E  +   + + ++A+ A  E R       P  G    +   GS +A ++ N+ V +  VHI +  +   P          G P     A G+ L     V  + EG    +  G  D   RK+L+L  L LY   ++  W
Sbjct:   13 YLGEYVHGLSTEALRISVWKGDVVLKDLKLKAEALNSLKLPVAVKSGFVGTITLKVPWKSLGKEPVIVLIDRVFVLAYPAPDGRTVKEEDREKLLETKLHQIEEAESATLEARAKSKLGSPPAG----NSWLGSLIATIIGNLKVSISNVHIRYEDSTSNP----------GHP----FAAGITLAKLAAVTMDEEGNETFDTSGALD-KLRKSLQLERLALYHDSNSFPW 224          
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Match: UPI000E70504A (putative vacuolar protein sorting-associated protein 13A n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E70504A)

HSP 1 Score: 87.0 bits (214), Expect = 5.120e-16
Identity = 68/242 (28.10%), Postives = 110/242 (45.45%), Query Frame = 0
Query:    6 RLAKWLGGHLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRKLQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPL--GSVMYDQDIEDAIRATIFERKQAKLARAEVRLAGGRKKPGWGARLVSGLAGSFVARLVRNISVEVERVHIIWCQNAVAPQADEAPPPLVGDPPRDSCAVGVYLGSFRVYPEAEGQNPR----GPADTNARKALELSGLCLYTKDSTLDWCTD 241
            R+   L  +L +YV  +  E+L+  +W GD+ L DL+++++    L+LPV ++ G VGT+ +KVPWK+       V +  V ++  P   G  +  +D E    A + + ++A+ A  E R   G  +PG  + L     GS VA ++ N+ + +  VH+ +      P          G P     + GV L         E  N      G  D   RK+L+L  L +Y    TL W  D
Sbjct:   20 RVLHLLRKYLGEYVHGLSAEALRISVWKGDVVLKDLKLKAEALNSLKLPVTVKAGFVGTITLKVPWKSLGKEPVIVRIDRVFILAHPAPDGRTLKAEDREKLFEAKLHQIEEAESATLEARSKLG-NQPGGNSWL-----GSLVATIIGNLKISITNVHVRYEDTISNP----------GHP----FSSGVTLAKLAAVTMDEHGNETFDTSGALD-RLRKSLQLDRLAVYHDSDTLPWKMD 240          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Y9_ECTSI1.190e-5554.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKF1_9PHAE1.900e-2951.03VPS13 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z9T2_9STRA2.700e-2858.70Vacuolar protein sorting-associated protein 13A N-... [more]
UPI001929EE667.930e-1826.81putative vacuolar protein sorting-associated prote... [more]
A0A2I0AQG3_9ASPA1.710e-1729.66Uncharacterized protein n=1 Tax=Apostasia shenzhen... [more]
A0A4S8IEM8_MUSBA7.800e-1728.03Uncharacterized protein n=1 Tax=Musa balbisiana Ta... [more]
A0A7J7MNU4_9MAGN1.730e-1628.33Uncharacterized protein n=1 Tax=Kingdonia uniflora... [more]
A0A804KGW1_MUSAM1.940e-1627.62Peroxin/Ferlin domain-containing protein n=3 Tax=M... [more]
A0A6D2K1T7_9BRAS4.820e-1627.27C2 domain-containing protein n=1 Tax=Microthlaspi ... [more]
UPI000E70504A5.120e-1628.10putative vacuolar protein sorting-associated prote... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026854Vacuolar protein sorting-associated protein 13, N-terminal domainPFAMPF12624Chorein_Ncoord: 7..119
e-value: 4.4E-22
score: 78.4
NoneNo IPR availablePANTHERPTHR16166:SF93VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13Dcoord: 15..168
IPR026847Vacuolar protein sorting-associated protein 13PANTHERPTHR16166VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13coord: 15..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:638092..647647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20089.1mRNA_S-ischiensis_contig84.20089.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 637882..647647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20089.1 ID=prot_S-ischiensis_contig84.20089.1|Name=mRNA_S-ischiensis_contig84.20089.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=247bp
MNPSRRLAKWLGGHLRQYVENVDDESLQHGLWSGDLQLLDLRIRSDLPRK
LQLPVVLQQGSVGTLHIKVPWKTFASGRASVVVSDVTLVLEPLGSVMYDQ
DIEDAIRATIFERKQAKLARAEVRLAGGRKKPGWGARLVSGLAGSFVARL
VRNISVEVERVHIIWCQNAVAPQADEAPPPLVGDPPRDSCAVGVYLGSFR
VYPEAEGQNPRGPADTNARKALELSGLCLYTKDSTLDWCTDGHTGPV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026854VPS13_N
IPR026847VPS13