prot_S-ischiensis_contig84.20078.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20078.1
Unique Nameprot_S-ischiensis_contig84.20078.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length220
Homology
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA)

HSP 1 Score: 229 bits (584), Expect = 8.330e-67
Identity = 124/205 (60.49%), Postives = 151/205 (73.66%), Query Frame = 0
Query:    1 QGYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPGGQGSEGDGEGPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVL 205
            +G+IKKT+L+AF SL   GL + +L  GDEL+ VK C E D++IIGT+QG AVRFAA + QLRP GR +RGVKAMK+   D PVDIDILPG    E   +G S+V VT QGYGKRV + EFK Q RGG GVIA KFK  +  GAA D L  LRV+  GD+++LST QGTIVRQ A  ++ Q RTATGV VQK+DEGDEIA++AV+
Sbjct:  605 RGWIKKTSLAAFQSLTARGLTIISLEDGDELLWVKTCTEADSIIIGTQQGMAVRFAASADQLRPSGRTSRGVKAMKFKPGDYPVDIDILPGADDQELP-DGKSLVAVTVQGYGKRVGADEFKIQRRGGMGVIATKFKTKR--GAAQDALCALRVIANGDQLLLSTAQGTIVRQPAATVSEQGRTATGVRVQKLDEGDEIASIAVV 806          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.170e-58
Identity = 117/226 (51.77%), Postives = 153/226 (67.70%), Query Frame = 0
Query:    1 QGYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILP--GGQGSEGDG-----EGPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVLPPMDDIDTDASTAK 219
            +GYIK+T L+AF S    GL++ +L   D L  VK+C ++D ++IG++QGYA RF A+   LRP GR +RGVKAM +  +DVPVDI ++P      + GD      EG S++++TT+GYGKRV   EFKT  RGGKGVIALK +Q        D LAC R+V   DEIMLST QGTIVRQ AG IA QSRTATGV+VQK+D  D I +VA++P + + D  A+T +
Sbjct:  783 KGYIKRTPLAAFRSTSSRGLIIISLGEDDTLRWVKRCCDDDGIVIGSKQGYATRFLANKKDLRPSGRTSRGVKAMNFRDEDVPVDIGVVPREAAAATAGDDAGVKEEGHSLLVLTTRGYGKRVALNEFKTTRRGGKGVIALKLRQK-----LEDTLACFRIVGADDEIMLSTAQGTIVRQRAGAIARQSRTATGVIVQKLDANDGIKDVALVPEISE-DAAATTGR 1002          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A2W1JRP7_9CYAN (DNA gyrase subunit A n=1 Tax=Acaryochloris thomasi RCC1774 TaxID=1764569 RepID=A0A2W1JRP7_9CYAN)

HSP 1 Score: 197 bits (501), Expect = 6.560e-55
Identity = 111/225 (49.33%), Postives = 145/225 (64.44%), Query Frame = 0
Query:    2 GYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPG----GQGSEGDGE---------------GPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVLPP 207
            GYIKKTALSAFG++R  GL+  +L  GD+L  V++ R ED+++IG+R G A+ F AD  QLRP+GR  RGV++M     D  + IDILP     G    GD                 GP ++++TT GYGKRV   +F+ Q R GKG+IA KFK  KT+  A D+LA LRVVN  DE+ML T +G I+RQA  DI+ QSR+ATGV VQ++D  D IA VA++PP
Sbjct:  626 GYIKKTALSAFGNIRSNGLIAISLEDGDQLRWVRRARVEDSIVIGSRLGMAIHFRADHQQLRPLGRATRGVRSMNLRDGDELIGIDILPSAVIAGLAEAGDDADVDDAVAEDLPDDIPGPWILVITTNGYGKRVPVDQFRLQNRAGKGLIATKFKAKKTKKQADDQLATLRVVNAEDELMLVTSRGVIIRQAVIDISSQSRSATGVRVQRLDADDFIAAVALVPP 850          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A7S2UV19_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV19_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.030e-54
Identity = 92/177 (51.98%), Postives = 127/177 (71.75%), Query Frame = 0
Query:   28 GDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPGGQGSEGDGEGPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAV 204
            GD +  V++C  +D+V+IGT+ GYA RF A+  QLR  GR ++GV+++   K DVPVD+DI+P    ++ + EG  ++ VT+ GYGKRV   EF  Q RGGKGVIA+KF+  + EGA  ++L CLRVV E DE++LST  G IVRQ A  I+ QSR+ATGV++QK+D+ DEI N+AV
Sbjct:    2 GDRVQWVRQCTAQDDVVIGTKNGYATRFKANDEQLRTTGRTSQGVRSINLRKGDVPVDMDIIP----NQEEEEGQMLLAVTSGGYGKRVAVGEFHAQNRGGKGVIAIKFRDGRNEGAHVEKLCCLRVVKEADEVVLSTRSGNIVRQRADQISLQSRSATGVIIQKLDQKDEIINIAV 174          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A7S3XNS8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNS8_HETAK)

HSP 1 Score: 185 bits (469), Expect = 1.670e-54
Identity = 104/205 (50.73%), Postives = 137/205 (66.83%), Query Frame = 0
Query:    2 GYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPGGQGSEGDGEGPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVLP 206
            G+IK+TALSAF  +   GL   +L  GD L  V +CR+   VIIGT+ G+A RF    ++LR  GR +RGVK+M     D PVD+DILP     + + +   ++++T  G GKRV + EF+ Q RGG GVIA KFK  +T+    D+LACLRVV++ DEI+LST  G IVRQ A DI+ Q R ATGV+VQK+ +GDEI NVAV+P
Sbjct:   84 GWIKRTALSAFQKVTARGLTCISLGDGDRLRHVGRCRDSQTVIIGTQNGFATRF--HMSKLRASGRSSRGVKSMNLRDGDRPVDMDILPD---PDTEADDQQLLLLTRSGLGKRVAATEFRIQGRGGMGVIATKFKARQTD----DKLACLRVVSDNDEIVLSTKGGNIVRQRAADISIQGRAATGVVVQKLVKGDEIVNVAVVP 279          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A3M1KYF0_9CYAN (DNA gyrase subunit A n=1 Tax=Cyanobacteria bacterium J083 TaxID=2420336 RepID=A0A3M1KYF0_9CYAN)

HSP 1 Score: 191 bits (484), Expect = 1.300e-52
Identity = 107/222 (48.20%), Postives = 143/222 (64.41%), Query Frame = 0
Query:    1 QGYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPG---------------GQGSEGDGEGPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVLPP 207
            +GYIKKTALSAF ++R  GL+  +LS  D+L  V+  + ED++I+GTRQG A+RF AD+ QLRP+GR  RGV+AMK   +D  + +D+LP                  G+E    GP ++ +TT+GYGKRV    F+ Q R G GV A+KFK  +      DRLA + VV E DE M+ T +G I+RQAA  I+ QSR+ATGV VQK+DE D IA VA++PP
Sbjct:  622 KGYIKKTALSAFHNIRSNGLIAISLSEDDQLRWVRLVKPEDSIIVGTRQGMAIRFLADNQQLRPLGRATRGVRAMKLRGNDEIISMDVLPSQVPATLSEEEEDENEDLGTEVANSGPWLLTITTEGYGKRVPVSRFRLQNRAGMGVRAIKFKNKQ------DRLAAIHVVQEDDEFMIVTNRGIIIRQAANAISPQSRSATGVRVQKLDEDDAIAAVALVPP 837          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A6P0QGR2_9CYAN (DNA gyrase subunit A n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=A0A6P0QGR2_9CYAN)

HSP 1 Score: 189 bits (480), Expect = 5.140e-52
Identity = 109/235 (46.38%), Postives = 145/235 (61.70%), Query Frame = 0
Query:    1 QGYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPGG----------QGSEGD------------------GEGPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVLPP 207
            +GYIKKTAL AFG++R  GL+  +L  GD+L  V++  E D++IIG+R G A+ F  D  QLRP+GR  RGVKAMK  +DD  + +DILPG             SE D                  G+GP +++VT  GYGKRV  K+F+ Q R G G++A KF+  K      D+L+ L VVNEGDE+M+ T +G I+RQ  G I+ QSR ATGV VQ++DE D IA VA++PP
Sbjct:  622 KGYIKKTALDAFGNIRANGLIAISLEEGDQLRWVRRATEADSIIIGSRMGMAIHFKTDHDQLRPLGRATRGVKAMKLKRDDELISMDILPGQVVASLAPVNETESEEDIEELNGAELNGAELVETAGQGPWVLVVTMGGYGKRVPVKQFRLQNRAGMGILATKFRLPK------DKLSSLMVVNEGDELMMVTSRGIIIRQVIGAISPQSRMATGVRVQRLDEDDAIAAVALVPP 850          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: UPI001408D516 (DNA gyrase subunit A n=1 Tax=Aphanocapsa montana TaxID=327565 RepID=UPI001408D516)

HSP 1 Score: 189 bits (479), Expect = 7.040e-52
Identity = 110/238 (46.22%), Postives = 149/238 (62.61%), Query Frame = 0
Query:    2 GYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPGG------QGSEGDGE-------------GPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVLPPMDDIDTDASTAKA 220
            GYIKKTALSAF ++R  GL+   L   D+L  V++ REED +IIGT QG A+ F AD  QLRP+GR  RGVKAMK    D+ + +D++ G       +  E D               GP ++++TTQGYGKRV   +F+ Q R GKGV + KFK+ K +    D +A LR+V+ GDE+ML T +G ++RQA   I+ QSR+ATGV VQ++D  D IA V ++PP +D D DA  A+A
Sbjct:  627 GYIKKTALSAFSNIRTNGLIAIALEEDDQLRWVRRAREEDTIIIGTHQGMAIHFRADHEQLRPLGRATRGVKAMKLKTGDLLIGMDVIAGAVTAGLDETLEEDAPDLEVEEEIIEETAGPWVLVITTQGYGKRVPVSQFRLQRRAGKGVTSTKFKKLKQK----DYVASLRIVHPGDELMLITSRGVVIRQAVDAISSQSRSATGVRVQRLDTEDSIAAVTLVPPSED-DGDAEFAEA 859          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A6P0XZA0_9CYAN (DNA gyrase subunit A (Fragment) n=1 Tax=Okeania sp. SIO2D1 TaxID=2607792 RepID=A0A6P0XZA0_9CYAN)

HSP 1 Score: 177 bits (450), Expect = 7.050e-52
Identity = 102/228 (44.74%), Postives = 137/228 (60.09%), Query Frame = 0
Query:    2 GYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPG-------GQGSEGD---------------GEGPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVLPP 207
            GYIKKTAL+AF  +R  GL+  +L  GD+L  V+  REED++IIG+RQG A+ F AD  QLRP+GR  RGVK+MK    D  + +D+LP            E D               G+GP ++ +T  GYGKRV+ K+F+ Q R G G+  +KF+  +      D L  L VVN+ DE+ML T +G I+RQA   I+ QSR ATGV VQK+D+ D I  VA++PP
Sbjct:   30 GYIKKTALAAFSRIRANGLIAISLEEGDQLRWVRLAREEDSIIIGSRQGMAIHFKADRQQLRPLGRSTRGVKSMKLRSGDEIISMDVLPSQVTAEVASAAEEEDEHLEETNEETTVTEPGQGPWVLAITRGGYGKRVSVKKFRLQNRAGMGLRGMKFRIDR------DELIALHVVNQDDELMLVTNRGIIIRQAVESISSQSRMATGVRVQKLDKDDAIVAVALVPP 251          
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Match: A0A6P0VLR8_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=2 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0VLR8_9CYAN)

HSP 1 Score: 182 bits (463), Expect = 8.350e-52
Identity = 106/229 (46.29%), Postives = 142/229 (62.01%), Query Frame = 0
Query:    1 QGYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQGYAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDIL--------------------PGGQGSEGDGEGPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLACLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIANVAVLPPMD 209
            QGYIKKTAL AF ++R  GL+  +L+ GD+L  V++ + ED+VIIG+RQG A+ F AD  QLRP+GR  RGVKAMK  + D  + +DIL                    PG +      E P +++VT  GYGKRV   +F+ Q R G G++A KF+  K      D+LA LRVVN+GDE+M+ T +G I+RQ    I+ QSR ATGV VQ++DE D IA VA++P  D
Sbjct:  223 QGYIKKTALDAFSNIRTNGLIAISLAEGDQLRWVRRAKAEDSVIIGSRQGMAIHFKADQEQLRPLGRATRGVKAMKLREHDELISMDILSSQVVANLAAASAEDDSQELPGEEVVATTSEEPWILVVTMGGYGKRVPVSQFRLQNRAGMGLLATKFRLPK------DQLAALRVVNQGDELMMVTSRGIIIRQIVDAISPQSRMATGVRVQRLDEDDAIAAVALVPISD 445          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CKD9_9STRA8.330e-6760.49DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribon... [more]
A0A6H5KKP9_9PHAE1.170e-5851.77DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectoca... [more]
A0A2W1JRP7_9CYAN6.560e-5549.33DNA gyrase subunit A n=1 Tax=Acaryochloris thomasi... [more]
A0A7S2UV19_9STRA1.030e-5451.98Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XNS8_HETAK1.670e-5450.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3M1KYF0_9CYAN1.300e-5248.20DNA gyrase subunit A n=1 Tax=Cyanobacteria bacteri... [more]
A0A6P0QGR2_9CYAN5.140e-5246.38DNA gyrase subunit A n=2 Tax=unclassified Microcol... [more]
UPI001408D5167.040e-5246.22DNA gyrase subunit A n=1 Tax=Aphanocapsa montana T... [more]
A0A6P0XZA0_9CYAN7.050e-5244.74DNA gyrase subunit A (Fragment) n=1 Tax=Okeania sp... [more]
A0A6P0VLR8_9CYAN8.350e-5246.29DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035516DNA gyrase/topoisomerase IV, subunit A, C-terminalGENE3D2.120.10.90coord: 1..205
e-value: 8.8E-52
score: 177.7
IPR035516DNA gyrase/topoisomerase IV, subunit A, C-terminalSUPERFAMILY101904GyrA/ParC C-terminal domain-likecoord: 1..213
IPR006691DNA gyrase/topoisomerase IV, subunit A, C-terminal repeatPFAMPF03989DNA_gyraseA_Ccoord: 1..36
e-value: 2.4E-4
score: 20.5
coord: 105..137
e-value: 1.9E-8
score: 33.6
coord: 159..205
e-value: 7.5E-7
score: 28.5
coord: 41..81
e-value: 3.9E-10
score: 39.0
NoneNo IPR availablePANTHERPTHR43493FAMILY NOT NAMEDcoord: 1..206
NoneNo IPR availablePANTHERPTHR43493:SF5DNA GYRASE SUBUNIT Acoord: 1..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:514417..518321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20078.1mRNA_S-ischiensis_contig84.20078.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 514417..518321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20078.1 ID=prot_S-ischiensis_contig84.20078.1|Name=mRNA_S-ischiensis_contig84.20078.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=220bp
QGYIKKTALSAFGSLRRAGLVVTTLSPGDELMSVKKCREEDNVIIGTRQG
YAVRFAADSTQLRPMGRGARGVKAMKYHKDDVPVDIDILPGGQGSEGDGE
GPSMVMVTTQGYGKRVNSKEFKTQARGGKGVIALKFKQSKTEGAAADRLA
CLRVVNEGDEIMLSTLQGTIVRQAAGDIAGQSRTATGVLVQKIDEGDEIA
NVAVLPPMDDIDTDASTAKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035516Gyrase/topoIV_suA_C
IPR006691GyrA/parC_rep