prot_S-ischiensis_contig84.20052.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig84.20052.1
Unique Nameprot_S-ischiensis_contig84.20052.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length273
Homology
BLAST of mRNA_S-ischiensis_contig84.20052.1 vs. uniprot
Match: A0A7S3XT19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT19_HETAK)

HSP 1 Score: 192 bits (488), Expect = 6.710e-57
Identity = 107/244 (43.85%), Postives = 140/244 (57.38%), Query Frame = 0
Query:   27 LGAYLGAEFAGDRDGPRKFYKGQYARALAWSAVLLLGWGFTRLTCTLGVPSDCNLANSPLEYMSDVQILLTYGLVQAWFCDVLERERFWNLFSWPRWYFFASFLSGGLAFSVVGDMPGLGSSLSSGSSYTVAQVALYASVGI-VALWVLCWHFWYARRVYSAADVLQNFRVYAWSRGATYLFFLLYTLAVVLSGASFEFHHYFLAWVVSLSAQFRHGLSVITLGVTAGIFVQGLGAYRSAFLFY 269
            L + L  E A   DGPRKFYKG+Y R   W AVL   W  TR+TC  G P+DC   +SP   M+D+QILL YG  QAWF ++LER RFW++FS  RWYF+         FSV+ D+P +  S+SS  S +   VA+  + G   +LW L +H  YA+ VY+    + NF VY   R    LFFL+Y +              +LAW VSL A F H  S++ L V+ G+ VQGLGAY + F+FY
Sbjct:   25 LSSDLSLEGAEHADGPRKFYKGEYTRMGVWLAVLTCLWIITRVTCACGAPNDCVSESSPSTTMNDIQILLLYGFTQAWFVEILERRRFWHVFSLQRWYFWVVLAGTPPVFSVISDLPVMEFSISSSFSLSGGMVAVLVAAGTGFSLW-LAFHILYAKHVYA----MDNFLVYVLGRVGVLLFFLVYMMVAYNEXXXXXXXXXWLAWAVSLFASFNHPASLLLLAVSTGVMVQGLGAYHTDFVFY 263          
BLAST of mRNA_S-ischiensis_contig84.20052.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 8.040e-27
Identity = 75/237 (31.65%), Postives = 119/237 (50.21%), Query Frame = 0
Query:   46 YKGQYARALAWSAVLLLGWGFTRLTCTLGVPSDCNLANSPLEYMSDVQILLTYGLVQAWFCDVLERERFWNLFSWPRWYFFASFLSGGLAFSVVGDMPGLG----SSLSSGSSYTVAQVALYASVGIVALWVLCWHFWYARRVYSAADVLQN-----------FRVYAWSRGATYLFFLLYTLAVVLSGASFEFHHYFLAWVVSLSAQFRHGLSVITLGVTAGIFVQGLGAYRSAFL 267
            Y+GQ  RAL W+A+  L W   RL C LG+P  C+LA  PL+ ++D+ +L T+ L QA++C++L  +RF  L   P  + F   L   +  S +G + GL      +      ++  +  ++    I A+ ++ WHF  A        +L               +Y+ SR     + +L+T  ++     F++    LAW++SL A F H +S I LGV  GIF+QG+GA R  FL
Sbjct:    4 YEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAP--WIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 238          
BLAST of mRNA_S-ischiensis_contig84.20052.1 vs. uniprot
Match: D7G1P1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P1_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 7.040e-26
Identity = 82/240 (34.17%), Postives = 118/240 (49.17%), Query Frame = 0
Query:   46 YKGQYARALAWSAVLLLGWGFTRLTCTLGVPSDCNLANSPLEYMSDVQILLTYGLVQAWFCDVLERERFWNLFSWPRWYFFASFLSGGLAFSVVG------DMPGLGSSLSSGSSYTVAQVALYASVGIVALWVLCWHFWYARRVYSAA---------DVL--QNF-RVYAWSRGATYLFFLLYTLAVVLSGASFEFHHYFLAWVVSLSAQFRHGLSVITLGVTAGIFVQGLGAYRSAFL 267
            Y  Q  RA AW  +LLL W F RL C   +P  C+L +  LE ++D+  LL +GL QAWFC+VLE  RF +L      YF    +  GL  S +       DM       +  S +  + + +   +    L ++ +HF  A R    A         D++  +N  R+Y  SRG    + LLY       G   + H+  LAWV+SL+AQF+   S+I L +  G+F+QG G+YR  FL
Sbjct:   32 YIEQAKRAAAWIGLLLLCWLFQRLMCHFNLPPHCDLPSDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTR--EAYFGIVIIVIGLIVSAIETTDWFQDMR-----FNDNSDWRDSHIVMAVVLITFVLVIVAYHFAEAWRTLPGAYYVSGNINLDIVIEENLHRIYNVSRGLIVSYALLYGAFAFEEGDGLKQHYVLLAWVLSLTAQFKSKPSIIWLALCTGVFIQGFGSYRLRFL 264          
BLAST of mRNA_S-ischiensis_contig84.20052.1 vs. uniprot
Match: A0A6H5JMR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 5.310e-12
Identity = 55/232 (23.71%), Postives = 102/232 (43.97%), Query Frame = 0
Query:   49 QYARALAWSAVLLLGWGFTRLTCTLGVPSDCNLANSPLEYMSDVQILLTYGLVQAWFCDVLERERFWNLFSWPRWYFFASFLSGGLAFSVVGDMPGLGSSLSSGSSYTVAQVALYASVGIVALWVLCWHFWYARRVYSA------------------ADVLQNFRVYAWSRGATYLFFLLYTLAVVLSGASFEFHHYFLAWVVSLSAQFRHGLSVITLGVTAGIFVQGLGAY 262
            Q  +A +W    +  +     +C +GVP +C  A   ++ ++++  L  +    A+ C +L   R+  L    + YF    ++ GLA S + +  G       G   + A+ AL   + I+   V  +H++ A +                      +     +  Y  S     L+ +L++      G  +++H+  LAW++SL A F   +SV  LG+T G+F+QG+GAY
Sbjct:   43 QGVKAASWVGFYIFLYALMAASCEVGVPENCTRATDAMDVLTELPFLFVFA---AFMCGILNGTRYHALSK--KMYFPVLVIASGLATSALMNNDGFEGLHDPGGDLSPAEAALSIILLILVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAY 269          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig84.20052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S3XT19_HETAK6.710e-5743.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LDF3_ECTSI8.040e-2731.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G1P1_ECTSI7.040e-2634.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMR1_9PHAE5.310e-1223.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 263..272
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 160..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..222
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 223..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 182..201
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
NoneNo IPR availableTMHMMTMhelixcoord: 160..181
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 239..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig84contigS-ischiensis_contig84:210148..213314 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig84.20052.1mRNA_S-ischiensis_contig84.20052.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig84 210047..213921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig84.20052.1 ID=prot_S-ischiensis_contig84.20052.1|Name=mRNA_S-ischiensis_contig84.20052.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=273bp
MLLDNDARQPLQSAPRKRGVRGCCASLGAYLGAEFAGDRDGPRKFYKGQY
ARALAWSAVLLLGWGFTRLTCTLGVPSDCNLANSPLEYMSDVQILLTYGL
VQAWFCDVLERERFWNLFSWPRWYFFASFLSGGLAFSVVGDMPGLGSSLS
SGSSYTVAQVALYASVGIVALWVLCWHFWYARRVYSAADVLQNFRVYAWS
RGATYLFFLLYTLAVVLSGASFEFHHYFLAWVVSLSAQFRHGLSVITLGV
TAGIFVQGLGAYRSAFLFYEHG*
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