prot_S-ischiensis_contig83.19982.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig83.19982.1
Unique Nameprot_S-ischiensis_contig83.19982.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length116
Homology
BLAST of mRNA_S-ischiensis_contig83.19982.1 vs. uniprot
Match: A0A835ZF90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF90_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.200e-27
Identity = 60/115 (52.17%), Postives = 81/115 (70.43%), Query Frame = 0
Query:    1 MSDPVLARKASGRSASPYKTDVYVDAVEAAKSTGELSVKECLRLAKELKDVSQLPASCRAYLDKQANINKAYAGMGGSQAARATQSQNSTITRGMTHAQLQRRWTSRRDPLAKKK 115
            MS+P +AR+AS        +   V       +TG+L++ ECLRL+K + DV++LPASCRAY+DKQ  + KA+ G GG+ AARAT +++ST  RG+THAQLQRRWT+ RDPL  KK
Sbjct:    1 MSNPAVARRASS-------SQQLVPDGSDNDTTGKLTIGECLRLSKLIADVTELPASCRAYIDKQHAVQKAHDGAGGNMAARATIAKHSTAARGLTHAQLQRRWTTGRDPLKHKK 108          
BLAST of mRNA_S-ischiensis_contig83.19982.1 vs. uniprot
Match: D8LIN1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIN1_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 4.480e-20
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 0
Query:   30 AKSTGELSVKECLRLAKELKDVSQLPASCRAYLDKQANINKAYAGMGGSQAARATQSQNSTITRGMTHAQLQRRWTSRRDPLAK 113
            A S  ++S +EC++LAKELK+VS+LP SCR YLDK+A +++A  GM G Q A  + ++NS I R MTHAQLQRR T+R +PL K
Sbjct:   20 ADSASDVSFEECVKLAKELKEVSRLPVSCRQYLDKKAVLHQACEGMTGDQLAEVSVARNSKIGRNMTHAQLQRRLTARENPLRK 103          
BLAST of mRNA_S-ischiensis_contig83.19982.1 vs. uniprot
Match: A0A4D9D738_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D738_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.360e-7
Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 0
Query:    1 MSDPVLARKASGRSASPYKTDVYVDAVEAAKSTGELSVKECLRLAKELKDVSQLPASCRAYLDKQANINKAYAGMGGSQAAR-ATQSQNSTITRGMTHAQLQRRWTSRRDPLAK 113
            MSD  L+RK S  S  PY  + Y    E     G+ +  +CLRLAK L D+SQ+PA C+  +  +  + KA+ G   +  AR A  ++  TI+    H QLQRR TS  + +A+
Sbjct:    1 MSDAKLSRKLSRTSDEPYLYESYSKDNE----DGKYTKTDCLRLAKTLTDLSQVPAPCKEVVQNEQAMRKAFEGATVTDRARHAIAARKGTIS----HHQLQRRLTSTSETMAR 106          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19982.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZF90_9STRA1.200e-2752.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LIN1_ECTSI4.480e-2055.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D738_9STRA1.360e-737.72Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:228403..233083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.19982.1mRNA_S-ischiensis_contig83.19982.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig83 227282..233288 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig83.19982.1 ID=prot_S-ischiensis_contig83.19982.1|Name=mRNA_S-ischiensis_contig83.19982.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=116bp
MSDPVLARKASGRSASPYKTDVYVDAVEAAKSTGELSVKECLRLAKELKD
VSQLPASCRAYLDKQANINKAYAGMGGSQAARATQSQNSTITRGMTHAQL
QRRWTSRRDPLAKKK*
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