prot_S-ischiensis_contig83.19978.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig83.19978.1
Unique Nameprot_S-ischiensis_contig83.19978.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length252
Homology
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BLAST of mRNA_S-ischiensis_contig83.19978.1 vs. uniprot
Match: D7FZY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY2_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 9.960e-10
Identity = 43/111 (38.74%), Postives = 64/111 (57.66%), Query Frame = 0 
Query:   11 VLVTTAVVQHLRRKSRGRASLD--ASAGGAIGGPLRITLEDLEGVSPATSPTLNLGGT-AGAAGLAQPGGGLGTGLVAVGSKGAWFNREKLRWEGFEEPDMSGFTLSDGST 118
            +  T+  V+H+R+++R R  L+  A AG  + GP++ITLEDL+        +L  GG  AG+A    PG        +  + GA FNR K+ WEGFEEPD++GF  +D  +
Sbjct: 1107 MTATSIAVEHVRKRTRERLLLEKGAGAGKRLSGPVQITLEDLQTSPSPDRMSLGAGGEDAGSAKSISPG--------STAAAGARFNRRKMCWEGFEEPDLTGFDTTDSES 1209
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZY2_ECTSI9.960e-1038.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:214998..217127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.19978.1mRNA_S-ischiensis_contig83.19978.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig83 214998..217129 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig83.19978.1 ID=prot_S-ischiensis_contig83.19978.1|Name=mRNA_S-ischiensis_contig83.19978.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=252bp
GDGAVSEGEGVLVTTAVVQHLRRKSRGRASLDASAGGAIGGPLRITLEDL
EGVSPATSPTLNLGGTAGAAGLAQPGGGLGTGLVAVGSKGAWFNREKLRW
EGFEEPDMSGFTLSDGSTSPTGGASPKPFGGDAPPPGPAAAAGTAQADEA
ELCKEGRTEDEGEKVAPAAAAAAAAAAASGGQEKEKEKEEDEDGEESDWD
ADAELAAAAAAAGPGCDGPGPAPSAPLLLAGLLASSSSRPAVGLAPAGQA
VR
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