prot_S-ischiensis_contig83.19962.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig83.19962.1
Unique Nameprot_S-ischiensis_contig83.19962.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length80
Homology
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BLAST of mRNA_S-ischiensis_contig83.19962.1 vs. uniprot
Match: A0A6H5KJ10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ10_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 1.390e-5
Identity = 27/33 (81.82%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    8 GDVLVFLPGQDDIEALSHLLRERLEAYRAEASR 40
            GDVLVFLPGQDDIEALS LLRE L   RAE SR
Sbjct:  593 GDVLVFLPGQDDIEALSQLLRENLATLRAEKSR 625
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BLAST of mRNA_S-ischiensis_contig83.19962.1 vs. uniprot
Match: D7FZX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX9_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 1.400e-5
Identity = 27/33 (81.82%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    8 GDVLVFLPGQDDIEALSHLLRERLEAYRAEASR 40
            GDVLVFLPGQDDIEALS LLRE L   RAE SR
Sbjct:  575 GDVLVFLPGQDDIEALSQLLRENLATLRAEKSR 607
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig83.19962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ10_9PHAE1.390e-581.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZX9_ECTSI1.400e-581.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48
NoneNo IPR availableGENE3D3.40.50.300coord: 3..67
e-value: 6.1E-6
score: 27.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig83contigS-ischiensis_contig83:148199..148689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig83.19962.1mRNA_S-ischiensis_contig83.19962.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig83 148198..148689 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig83.19962.1 ID=prot_S-ischiensis_contig83.19962.1|Name=mRNA_S-ischiensis_contig83.19962.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=80bp
NGGGRDGGDVLVFLPGQDDIEALSHLLRERLEAYRAEASRMAAHLRAEAQ
SQASSGYDSDGAPPSDQGNGKGQQPWWQNG
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