prot_S-ischiensis_contig82.19940.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig82.19940.1 vs. uniprot
Match: A0A2Z4MTA2_SACJA (HMG-box containing protein isoform 1 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4MTA2_SACJA) HSP 1 Score: 119 bits (298), Expect = 1.890e-26 Identity = 105/315 (33.33%), Postives = 141/315 (44.76%), Query Frame = 0
Query: 74 GMPVDAVLRTLRTSGLQFLLGEGTALLSLQEFSQLESTLESCTIFGFDGNSAAAFAVMDGCENFCQDIEPGCYELGISQQMDRKERRRFEEVALRMLAKGEHIVDTGGIFWAFCDGTGNASSPP-----------VFIHIIAGQDNTWGCHVHEQRGSMKVEVETLRTGSADPAIMIWRHPRVIKDQGVLSWNQQDAHQSKYMRATTGDLPCCEYVVTNNGSSQLKLSISFAGNGKASTEMRRAPKRQKKDPNRPRGYISAFNFFVQTKRPHYLNQHPQVQDMSIEQNNVINKVLGRLWKLATKDERRVYEEMAT 377
G PVD + +R +GL FL AL SL + L ++ IF +DG AA FCQ + G Y+LG+S R + R + L G GG + SSP V +H + T G VH R VE G + I ++D V+ + H ++ R TG L +G S+ + + + E APKR KKDPNRPRGYISAFNFFV+ KRP Y+ P Q S+E NN INK+LG++WK AT+ E++ YEE AT
Sbjct: 9 GPPVD-LFDGVRNAGLLFLDLGCEALASLSAANDLHG-IDRSRIFAYDGVHAAILVTEGRRRIFCQQVSCGLYDLGVSIN-SRSDWRDALSATVTSLIMGSTESIAGGAPCGLNSRSEWFSSPAWSSVVHMAPSRVAVHQRCADEATEGLSVHYFR----TMVEDRHLGLSS----IHDRQDNVQDAFVI-FGTHSRHPVRF-RQHTGAL--------GHGRSRYSKPQT-----RVAYESATAPKRHKKDPNRPRGYISAFNFFVKDKRPTYVQSRPNAQGHSLEHNNEINKMLGKVWKTATEQEKKTYEEKAT 297
BLAST of mRNA_S-ischiensis_contig82.19940.1 vs. uniprot
Match: A0A6H5JSJ1_9PHAE (HMG protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSJ1_9PHAE) HSP 1 Score: 114 bits (286), Expect = 1.640e-24 Identity = 100/349 (28.65%), Postives = 159/349 (45.56%), Query Frame = 0
Query: 39 VVETTLV--TAGDIETRGWVGLSA-EGKVWVSQANVTSGMPVDAVLRTLRTSGLQFLLGEGTALLSLQEFSQLESTLESCTIFGFDGNSAAAFAVMDGCENFCQDIEPGCYELGISQQMDRKERRRFEEVALRMLAKGEHIVDTGGIFWAFCDGTGNASSPPVFIHIIAGQDNTWGCHVHEQRGSMKVEVETLRTGSADPAIMIWRHPRVIKDQGVLSWNQQDAHQSKYMRATTGDLPCCEYVVTN---NGSSQ-LKLSISFAGNGKASTEMRRA-------PKRQKKDPNRPRGYISAFNFFVQTKRPHYLNQHPQVQDMSIEQNNVINKVLGRLWKLATKDERRVYE 373
VV T L ++ T WVG S+ +VW Q + +G+ + +R +G FL A+ L E L + +++ IF FDG AA D FCQ I G Y+LG+S + + + A ++ G G + + P+F + W VH + V + G+ D + ++H V D G++S +++ + S A +V+ N +GS++ ++ S + S+E RR PKR++KDPNRPRGY+SAFNFFV+ KR Y+ Q +S NN +NK+LG+ WK T +E+ Y+
Sbjct: 33 VVSTRLPAKSSSSAGTTHWVGFSSCRKRVWGMQGSNANGVLPIGIADRIRNAGCLFLNSTRGAVEGLSEMKDL-AEIDTSRIFAFDGRHAAILVTEDCTRVFCQQISAGLYDLGVSIEPRPDWQDILDAAASSLIPDGVGSNACGAV----------SGMEPLFKAVPL-----WASVVHVAPHRVSVHQRSA-DGATDG--VAFQHSLVSGDGGLVSTAKEEMYHSSVQDA---------FVIFNTHPSGSTRFVEHSRALTSGHTHSSEPRRTVPKKTSPPKRKRKDPNRPRGYVSAFNFFVKDKRSAYVRD---AQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQ 350
BLAST of mRNA_S-ischiensis_contig82.19940.1 vs. uniprot
Match: D7G5V4_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V4_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 8.490e-20 Identity = 88/317 (27.76%), Postives = 142/317 (44.79%), Query Frame = 0
Query: 68 QANVTSGMPVDAVLRTLRTSGLQFLLGEGTALLSLQEFSQLESTLESCTIFGFDGNSAAAFAVMDGCENFCQDIEPGCYELGISQQMDRKERRRFEEVALRMLAKGEHIVDTGGIFWAFCDGTGNASSPPVFIHIIAGQDNTWGCHVHEQRGSMKVEVETLRTGSADPAIMIWRHPRVIKDQGVLSWNQQDAHQSKYMRATTGDLPCCEYVVTN---NGSSQ-LKLSISFAGNGKASTEMRRA-------PKRQKKDPNRPRGYISAFNFFVQTKRPHYLNQHPQVQDMSIEQNNVINKVLGRLWKLATKDERRVYE 373
Q + T+G+ ++R +G FL A+ L E L +++ IF FDG AA D FCQ I G Y+LG+S + + + A ++ G G + P+F + W VH + V + G D + ++H V D G++S +++ + + A +V+ N +GS++ ++ S + S+E RR P+R++KDPNRPRGY+SAFNFFV+ KR Y+ Q +S NN +NK+LG+ WK T +E+ Y+
Sbjct: 2 QGSNTNGVLPIGFADSIRKAGCLFLNSTLGAVEGLSEVKDLAG-IDTSRIFAFDGRHAAILVTEDCTRVFCQQISAGLYDLGVSIEPRPDWQDILDAAASSLIPDGVGSNACGAV----------GGMEPLFNALPL-----WASVVHVAPHRVSVH-QRSSDGVTDG--VAFQHSLVNGDGGLVSTAKEEMYHNSVQDA---------FVIFNTHPSGSTRFVEHSQALTSGHTRSSEARRMVPKKTSPPRRKRKDPNRPRGYVSAFNFFVKDKRSAYVRD---AQGVSPGNNNEVNKMLGQAWKELTTEEKNCYQ 287 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig82.19940.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig82.19940.1 ID=prot_S-ischiensis_contig82.19940.1|Name=mRNA_S-ischiensis_contig82.19940.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=377bpback to top |