prot_S-ischiensis_contig82.19905.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig82.19905.1
Unique Nameprot_S-ischiensis_contig82.19905.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length405
Homology
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: D8LJ86_ECTSI (Leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ86_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 7.900e-30
Identity = 59/107 (55.14%), Postives = 79/107 (73.83%), Query Frame = 0
Query:   65 TSTRRLVYQALQDVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQ-GGKLVSMNLISNDLEGTIPHTVSDLVTLSELNLSYNFRVSGPLPSAVGNMTSLTVLHVYSA 170
            ++ RR+  Q LQD+YD LGG+ W+ RDGW+ PGSDVR+WHGL I   G LVS+NLISNDLEG +P ++ +L +L  LNLSYNF + G +P  +G++  L  LH+YSA
Sbjct:   30 STQRRMANQGLQDLYDWLGGDNWKCRDGWLDPGSDVREWHGLTITTSGDLVSINLISNDLEGEMPESLCNLYSLQHLNLSYNFGLRGWIPEGLGDLIKLKTLHLYSA 136          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: D7FV03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV03_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 9.540e-18
Identity = 35/57 (61.40%), Postives = 48/57 (84.21%), Query Frame = 0
Query:   68 RRLVYQALQDVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQGGKLVSMNLISNDLE 124
            RRL  QAL DV+++LGG+RWR++ GW+ PG+DV+KWHG+ +  G LVS+NL+SNDLE
Sbjct:   14 RRLANQALVDVFNALGGDRWRNKSGWLTPGTDVKKWHGVTVNAGSLVSLNLMSNDLE 70          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: A0A836CGG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGG7_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 9.450e-17
Identity = 36/88 (40.91%), Postives = 57/88 (64.77%), Query Frame = 0
Query:   77 DVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQGGKLVSMNLISNDLEGTIPHTVSDLVTLSELNLSYNFRVSGPLPSAVGNMTSLTV 164
            D+Y +  G++W   + W+ PGS+VRKW+G+G++ G L S+ L +N+L G +P T+  L  L  L+LS+N  + G +P  VG +T L V
Sbjct:    1 DLYHATAGDQWWRAERWLAPGSEVRKWYGIGVRHGALTSLRLPNNNLSGALPQTLGGLAALRALDLSFNKALRGRVPRCVGALTRLRV 88          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: A0A3F2RJP5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJP5_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.610e-10
Identity = 35/90 (38.89%), Postives = 59/90 (65.56%), Query Frame = 0
Query:   74 ALQDVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQGGKLVSMNLISNDLEGTIP-HTVSDLVTLSELNLSYNFRVSGPLPSAVGNMTSL 162
            AL ++YD+LGG+RWR RDGW  P  D  +W G+ +  G +V++ L +N+L G +P  +++ L  L  L+LS N ++ G +P+ +G + +L
Sbjct:  243 ALVEIYDALGGDRWRRRDGWKQPTQDPEQWFGVEVTMGHVVALELPANELSGCLPAESLARLPQLRVLDLSKN-QLRGEIPAELGTLEAL 331          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: D7G175_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G175_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 8.150e-10
Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = 0
Query:  124 EGTIPHTVSDLVTLSELNLSYNFRVSGPLPSAVGNMTSLTVLHVYSA 170
            +GTIP T+S+LVTL+ELN+SYNF V G LP  VG+M +LTVLH+YSA
Sbjct:   27 KGTIPSTISNLVTLNELNMSYNFGVVGFLPREVGSMANLTVLHIYSA 73          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: A0A7L5DP75_9BACT (Uncharacterized protein n=1 Tax=Spirosoma sp. CJU-R4 TaxID=2728024 RepID=A0A7L5DP75_9BACT)

HSP 1 Score: 70.5 bits (171), Expect = 1.140e-9
Identity = 33/105 (31.43%), Postives = 60/105 (57.14%), Query Frame = 0
Query:   72 YQALQDVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQGGKLVSMNLIS-------NDLEGTIPHTVSDLVTLSELNLSYNFRVSGPLPSAVGNMTSLTVLHVYS 169
            Y  L ++Y+S  G+ W +R GW+        W G+    G++  +NL +       N+L+G  P TV  L+ L +L +S+N +++GP+PS++G +T L  + ++S
Sbjct:   32 YLPLANLYNSTKGDSWFNRSGWLSNCDPCSGWFGVSCTDGRVTELNLGNPVNRTQGNNLDGPFPQTVGGLLKLRKLVVSFNSKLTGPIPSSLGQLTDLRYVDLFS 136          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: H3GFP3_PHYRM (Crinkler domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFP3_PHYRM)

HSP 1 Score: 71.2 bits (173), Expect = 1.370e-9
Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 0
Query:   74 ALQDVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQGGKLVSMNLISNDLEGTIPH-TVSDLVTLSELNLSYNFRVSGPLPSAVG 157
            AL ++YD+LGG+RWR RDGW  P  D  +W G+ +  G +V++ L +N+L G +P  +++ L  L  L+LS N ++ G LP+ +G
Sbjct:   15 ALVELYDALGGDRWRRRDGWKQPTRDPEQWFGVEVAMGHVVALELPANELSGCLPAASLAQLPQLRVLDLSKN-QLRGELPAELG 98          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: A0A6N9AKJ3_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6N9AKJ3_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 2.120e-9
Identity = 40/100 (40.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:   74 ALQDVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQG-GKLVSMNLISNDLEGTIPHTVSDLVTLSELNLSYNFRVSGPLPSAVGNMTSLTVLHVYSAGL 172
            AL  +Y++  G  W  R  W+   + +  WHG+ I   G++ S++L  N+LEGT+P  +SDL +LS L+LS N  +SGPLP+++  +  LTVL +   GL
Sbjct:  383 ALIALYNAADGGNWTGRQNWLTA-APLSAWHGVTINDQGQVTSLDLADNNLEGTLPSRLSDLRSLSILDLSNNSSLSGPLPASLVGL-GLTVLKLGGTGL 480          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: UPI00058B3D6E (hypothetical protein n=1 Tax=Psychroserpens damuponensis TaxID=943936 RepID=UPI00058B3D6E)

HSP 1 Score: 68.9 bits (167), Expect = 2.340e-9
Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   70 LVYQALQDVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQGGKLVSMNLISNDLEGTIPHTVSDLVTLSELNLSYNFRVSGPLPSAVGNMTSL 162
            L   AL+ +Y+S  G +W     W +    V++WHG+ ++G K++ +NL  N+L GTIP  + DLV L  +N   N R+SG +P+ + N+ SL
Sbjct:   24 LEKDALKAIYNSTNGAQWSTT--WDL-NKPVQEWHGVTVKGDKVIGLNLEYNNLSGTIPQEIGDLVHLRHINFFRN-RISGGIPTTIKNLKSL 112          
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Match: K3WE76_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WE76_GLOUD)

HSP 1 Score: 68.2 bits (165), Expect = 7.610e-9
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   73 QALQDVYDSLGGERWRHRDGWMVPGSDVRKWHGLGIQGGKLVSMNLISNDLEGTIPHTVSDLVTLSELN 141
            QAL ++YD+LGG+RWR RD W  P  DV  W+G+ +  G +V++ L +N+L G IP +++ L  L  L+
Sbjct:   14 QALLELYDALGGDRWRRRDAWKQPTVDVESWYGVDVMMGHVVAIELPANELCGRIPDSLARLTFLRVLD 82          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig82.19905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ86_ECTSI7.900e-3055.14Leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]
D7FV03_ECTSI9.540e-1861.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGG7_9STRA9.450e-1740.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3F2RJP5_9STRA1.610e-1038.89Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
D7G175_ECTSI8.150e-1068.09Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A7L5DP75_9BACT1.140e-931.43Uncharacterized protein n=1 Tax=Spirosoma sp. CJU-... [more]
H3GFP3_PHYRM1.370e-941.18Crinkler domain-containing protein n=1 Tax=Phytoph... [more]
A0A6N9AKJ3_9BACT2.120e-940.00Uncharacterized protein n=1 Tax=Gemmatimonadetes b... [more]
UPI00058B3D6E2.340e-937.63hypothetical protein n=1 Tax=Psychroserpens damupo... [more]
K3WE76_GLOUD7.610e-943.48Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 314..334
NoneNo IPR availablePANTHERPTHR27008:SF256INACTIVE RECEPTOR KINASE RLK902-RELATEDcoord: 162..284
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 162..284
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 93..255
NoneNo IPR availablePANTHERPTHR27008:SF256INACTIVE RECEPTOR KINASE RLK902-RELATEDcoord: 93..255
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 106..277
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 231..255
e-value: 53.0
score: 7.3
coord: 183..205
e-value: 28.0
score: 9.6
coord: 207..230
e-value: 18.0
score: 11.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 72..285
e-value: 3.0E-45
score: 156.6
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 184..244
e-value: 4.1E-10
score: 39.3
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 185..208
score: 7.027
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 209..231
score: 5.848
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 233..252
score: 5.032
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 257..279
score: 5.332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig82contigS-ischiensis_contig82:66218..78851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig82.19905.1mRNA_S-ischiensis_contig82.19905.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig82 64583..79613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig82.19905.1 ID=prot_S-ischiensis_contig82.19905.1|Name=mRNA_S-ischiensis_contig82.19905.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=405bp
MPYTDAGQEGGGGSPLSSGSDNRVGQLQDHGSGWDSGGGNGGINAGGKDG
VLRGASGGSRSHRRTSTRRLVYQALQDVYDSLGGERWRHRDGWMVPGSDV
RKWHGLGIQGGKLVSMNLISNDLEGTIPHTVSDLVTLSELNLSYNFRVSG
PLPSAVGNMTSLTVLHVYSAGLSGSIPSSLSRLSNLRELWLNGNELTGSI
PDGLGFLNNLKELYLNSNELDGAIPQSFSCLTSLEGLNLSWNRLSGGFPD
CLGNMVSLKLLVLEGNNDLEDVPPSEHGPPLNQWMAVKRAVLVAGLEERL
LASESAREVEGEETRRMGAQLEAARAHIRRLEERLVNAGLGLDVLEEVGT
SHLPMPSILLALQALQMLEFIATPLLTEQCGYCIVPVPTQARPTLLERAW
STLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt