prot_S-ischiensis_contig80.19850.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig80.19850.1
Unique Nameprot_S-ischiensis_contig80.19850.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length290
Homology
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: A0A6H5L8L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8L8_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 5.860e-55
Identity = 140/208 (67.31%), Postives = 156/208 (75.00%), Query Frame = 0
Query:   80 RGGDWPCPQCNNNCFAFRTECNRCGTPKPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDGDPYAASGGGSRXXXGASECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQ----KRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMA 283
            R GDW CP C NNCFAFR ECNRC TPKP+GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          DG     +G         S CG +CG+EC NNRVYVSGLP  + E DLVDKF  IGIIA+IRQ    KRGYKD+WP+SVRIYKD +TGKP GD ++KYEE  SAHA+++WFDGI+ +G KI V MA
Sbjct:  144 RDGDWACPSCGNNCFAFRNECNRCQTPKPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRD-------DGREEEPAGT-------ESTCGKDCGDECDNNRVYVSGLPTTITETDLVDKFSTIGIIARIRQARASKRGYKDQWPFSVRIYKDSNTGKPKGDCIIKYEEPNSAHAAMRWFDGIDFKGGKIGVAMA 337          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: D8LIQ1_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ1_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.350e-47
Identity = 71/104 (68.27%), Postives = 86/104 (82.69%), Query Frame = 0
Query:  180 SECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMA 283
            S CG +CG+EC NNRVYVSGLP  + E DLV+KF  IGIIA+IRQKRGYKD+WP+SVRIYKD +TGKP GD ++KYEE  SAHA+++WFDGI+ +G KI V MA
Sbjct:   46 STCGKDCGDECDNNRVYVSGLPTTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDNTGKPKGDCIIKYEEPNSAHAALRWFDGIDFKGGKIGVAMA 149          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: A0A1Y1IL69_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IL69_KLENI)

HSP 1 Score: 140 bits (354), Expect = 4.780e-36
Identity = 95/220 (43.18%), Postives = 121/220 (55.00%), Query Frame = 0
Query:   79 GRGGDWPCPQ--CNNNCFAFRTECNRCGTPKPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDGDP------------YAASGGGSRXXXGASECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMAK 284
            GR GDW CP   C NN FA RTECNRCGTP+PAG   XXXXXXXXXXXXXX                             XXXX                 +    GG        +C   CG+ C N R+Y+SGLP +  E ++ + F GIG I +IRQKRGYKD+WPW+++IY D + GK  GD V+ YE+  +AH++  +F+G  +RGSK+ V MA+
Sbjct:   49 GRDGDWICPNPSCGNNNFAKRTECNRCGTPRPAGGAAXXXXXXXXXXXXXXARESGYNDRGGGGFRSGGGDWSRPPESREXXXXXXXXXXXXXXXXXXXXSHXXXDGGDDSGPAVKQCDDKCGDSCDNARIYISGLPDNTTEDEIRELFSGIGQIGRIRQKRGYKDQWPWNIKIYTDDA-GKQKGDGVLTYEDPAAAHSAGGFFNGHSLRGSKLTVTMAQ 267          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: A0A2K1JP98_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JP98_PHYPA)

HSP 1 Score: 137 bits (346), Expect = 8.970e-35
Identity = 107/220 (48.64%), Postives = 135/220 (61.36%), Query Frame = 0
Query:   80 RGGDWPCPQ--CNNNCFAFRTECNRCGTPKPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDGDPYAASGGGSRXXXGAS--------------ECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMA 283
            R GDW CP   C N  FA R ECN+C  PKP    XXXXXXX      XXXXXXXXXXXX        XXXXXXX          G  + + GG   XX GA               +C  NCG+ C N R+Y+SGLP DV+E +L + FGGIG +A+I+QKRGYKD+WP++++IY+D+S GK  GDAV+ YE+  +AH++  +F+  E+RG KIKV MA
Sbjct:   88 RSGDWTCPNVTCGNVNFARRMECNKCQAPKPQSTGXXXXXXXGYGGEQXXXXXXXXXXXXNSYDEPGHXXXXXXXYDRE-----QGRSHESRGGXXXXXYGAQSREESKDAVDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELRELFGGIGQVARIKQKRGYKDQWPYNIKIYQDES-GKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAMA 301          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: A9U3C2_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U3C2_PHYPA)

HSP 1 Score: 137 bits (346), Expect = 1.020e-33
Identity = 107/220 (48.64%), Postives = 135/220 (61.36%), Query Frame = 0
Query:   80 RGGDWPCPQ--CNNNCFAFRTECNRCGTPKPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDGDPYAASGGGSRXXXGAS--------------ECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMA 283
            R GDW CP   C N  FA R ECN+C  PKP    XXXXXXX      XXXXXXXXXXXX        XXXXXXX          G  + + GG   XX GA               +C  NCG+ C N R+Y+SGLP DV+E +L + FGGIG +A+I+QKRGYKD+WP++++IY+D+S GK  GDAV+ YE+  +AH++  +F+  E+RG KIKV MA
Sbjct:   88 RSGDWTCPNVTCGNVNFARRMECNKCQAPKPQSTGXXXXXXXGYGGEQXXXXXXXXXXXXNSYDEPGHXXXXXXXYDRE-----QGRSHESRGGXXXXXYGAQSREESKDAVDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELRELFGGIGQVARIKQKRGYKDQWPYNIKIYQDES-GKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAMA 301          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: A9T0V1_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T0V1_PHYPA)

HSP 1 Score: 133 bits (335), Expect = 3.390e-33
Identity = 93/221 (42.08%), Postives = 122/221 (55.20%), Query Frame = 0
Query:   77 AGGRGGDWPCPQ--CNNNCFAFRTECNRCGTPKPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDGDPYAASGGG------------SRXXXGASECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMA 283
            +G R GDW C    C N  FA R ECN+C   KP    XXXXXXXXX           XXXXXXX                       G  Y + GGG                    +C  NCG+ C N R+Y+SGLP DV+E +L + FGGIG +A+++QKRGYKD+WP++++IY+D+S GK  GDAV+ YE+  +AH++  +F+  E+RG KIKV MA
Sbjct:   95 SGDRSGDWTCLNAGCGNVNFARRMECNKCQASKPQSAAXXXXXXXXXREGGGNSYDEGXXXXXXXRGHDRE----------------QGRAYESRGGGYGAQPREDITVDGSKDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELQELFGGIGQVARVKQKRGYKDQWPYNIKIYQDES-GKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAMA 298          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: UPI000D1C532F (transcription initiation factor TFIID subunit 15b n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C532F)

HSP 1 Score: 134 bits (336), Expect = 1.330e-32
Identity = 101/214 (47.20%), Postives = 129/214 (60.28%), Query Frame = 0
Query:   78 GGRGGDWPCPQ--CNNNCFAFRTECNRCGTPKPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDGDPYAASGGGSRXXXGASECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMAKSRDDR 289
            GGR GDW CP   C N  FA RTECN+C  PKPA        XXXXXXXXXX         XXXXXXXXXXXXXXXXXX                          +C  NCG++C N R+Y+S LP DV+ ++L   FGGIG +A+I+Q+RGYKD+WPW++++Y D   G   GD V+ YE+  +AHA+  +F+G  +RG++IKV MA+    R
Sbjct:  195 GGRDGDWLCPNPSCGNVNFAKRTECNKCKGPKPANAGSDFGGXXXXXXXXXXYGGDNNYRGXXXXXXXXXXXXXXXXXXEEQ---------------GNDEVKVKQCDENCGDKCENTRIYISNLPLDVQIEELRTLFGGIGQVARIKQRRGYKDQWPWNIKLYTDDG-GNNKGDGVLCYEDPSAAHAAGGFFNGYNLRGNEIKVSMAEKSAPR 392          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: A0A803KS81_CHEQI (RRM domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803KS81_CHEQI)

HSP 1 Score: 126 bits (316), Expect = 1.140e-31
Identity = 54/109 (49.54%), Postives = 79/109 (72.48%), Query Frame = 0
Query:  181 ECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMAKSRDDR 289
            +C  NCG+ C N+R+Y+S LP DV  ++L + FG IGI+A+I+QKRGYKD+WP+S+++Y D S GK  GD V+ YE+  +AH++  +F+G +IRG KI V MA+    R
Sbjct:  101 QCDENCGDSCDNSRIYISNLPPDVAIEELRELFGSIGIVARIKQKRGYKDQWPYSIKLYTDDS-GKNKGDGVLSYEDPSAAHSARGFFNGYDIRGHKINVTMAEKSAPR 208          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: UPI00098DFAB3 (LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 15b n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098DFAB3)

HSP 1 Score: 128 bits (322), Expect = 3.030e-31
Identity = 73/219 (33.33%), Postives = 100/219 (45.66%), Query Frame = 0
Query:   80 RGGDWPCPQ--CNNNCFAFRTECNRCGTPKPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDGDPYAASGGGSRXXX-------GASECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMAKSRDDR 289
            R GDW CP   C N  FA RTEC +CG P PAG                                                    G      GGG               +C  NCG+ C N R+Y+S LP DV  ++L + FGGIG + +I+ KRGYKD+WPW++RIY D S+G   GDA + YE+  +AH++  +++  ++RG +I V MA+    R
Sbjct:   72 RDGDWVCPNSSCGNVNFARRTECXKCGAPSPAGGGGGEDLAEAEVIIRSGRSDIIMALWCCRNYDGGRSYDVTVWQFWSM-----GSKGLMCGGGDMAVLLCEPPVAKVKQCDENCGDSCDNARIYISNLPPDVTTEELQELFGGIGQVGRIKMKRGYKDQWPWNIRIYTD-SSGNNKGDACLAYEDPSAAHSAGGFYNNYDMRGYRINVAMAEKSAPR 284          
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Match: S8BV96_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8BV96_9LAMI)

HSP 1 Score: 129 bits (323), Expect = 3.650e-31
Identity = 82/238 (34.45%), Postives = 110/238 (46.22%), Query Frame = 0
Query:   79 GRGGDWPCPQ--CNNNCFAFRTECNRCGTPKPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----MDGDPYAASGGGSRXXX-------------------------GASECGANCGEECPNNRVYVSGLPADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGDAVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMAK 284
            GR GDW CP   C N  FA RTECN+CG   PAG                                                        D + Y+ + GG RXXX                            +C  +CG+ C N R+Y+S LP DV   +L + FG IG +A+I+QKRGYKD+WPWS+++Y D+  GK  GDAV+ YE+  +AH++  +F+G E+RG KIKV MA+
Sbjct:   81 GRDGDWRCPNPSCGNLNFARRTECNKCGAA-PAGSEDNRGGRSSYSDGYDAGNGKGGSYDGGSYGNPPNPYGGNPSYSTDAVPPPSYGGYDRNSYSDNRGGGRXXXXXXXXXXXXXXXXXXXXXVPEDSSENVKQCDESCGDSCDNARIYISNLPPDVTIDELRELFGSIGQVARIKQKRGYKDQWPWSIKLYTDEQ-GKNKGDAVLSYEDPSAAHSAGGFFNGHEMRGHKIKVSMAE 316          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig80.19850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8L8_9PHAE5.860e-5567.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ1_ECTSI1.350e-4768.27RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1Y1IL69_KLENI4.780e-3643.18Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A2K1JP98_PHYPA8.970e-3548.64Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A9U3C2_PHYPA1.020e-3348.64Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A9T0V1_PHYPA3.390e-3342.08Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
UPI000D1C532F1.330e-3247.20transcription initiation factor TFIID subunit 15b ... [more]
A0A803KS81_CHEQI1.140e-3149.54RRM domain-containing protein n=1 Tax=Chenopodium ... [more]
UPI00098DFAB33.030e-3133.33LOW QUALITY PROTEIN: transcription initiation fact... [more]
S8BV96_9LAMI3.650e-3134.45Uncharacterized protein n=1 Tax=Genlisea aurea Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 82..106
e-value: 7.4E-6
score: 35.5
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 80..109
score: 10.128
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 194..281
e-value: 8.3E-8
score: 41.9
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 193..285
score: 13.669
NoneNo IPR availableGENE3D4.10.1060.10coord: 77..111
e-value: 7.2E-12
score: 46.3
NoneNo IPR availablePANTHERPTHR12999:SF7ZINC FINGER RAN-BINDING DOMAIN-CONTAINING PROTEIN 2coord: 69..288
NoneNo IPR availablePANTHERPTHR12999FAMILY NOT NAMEDcoord: 69..288
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 122..283
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 79..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig80contigS-ischiensis_contig80:695910..700508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig80.19850.1mRNA_S-ischiensis_contig80.19850.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig80 695368..700701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig80.19850.1 ID=prot_S-ischiensis_contig80.19850.1|Name=mRNA_S-ischiensis_contig80.19850.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=290bp
MAGGGGTGMVAVGEATEEGAAEATAALATGTAPAAATCALPAAGSATGAR
PPGRRARTAGTAAATVGAATAAAGGWAGGRGGDWPCPQCNNNCFAFRTEC
NRCGTPKPAGAGGGGGRRGERSRSPHRRDNGGGGHRDRSRSRSKERARRG
DGGGGGGGRGMDGDPYAASGGGSRGGGGASECGANCGEECPNNRVYVSGL
PADVEEKDLVDKFGGIGIIAKIRQKRGYKDEWPWSVRIYKDQSTGKPSGD
AVVKYEEAGSAHASIKWFDGIEIRGSKIKVQMAKSRDDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR000504RRM_dom
IPR035979RBD_domain_sf
IPR036443Znf_RanBP2_sf