prot_S-ischiensis_contig8.19802.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19802.1
Unique Nameprot_S-ischiensis_contig8.19802.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length234
Homology
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BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: D7G6B4_ECTSI (Rab11B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B4_ECTSI)

HSP 1 Score: 219 bits (557), Expect = 1.990e-68
Identity = 108/139 (77.70%), Postives = 122/139 (87.77%), Query Frame = 0 
Query:    2 TLDYDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDGAAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKI 140
            +L+YD L+KIVLVGDAAVGKTNLLA YTSQDKR + DG   SF S +K TVGVEFATM+VTHPDGKRIKAQIWDTAGQERYRAITSSHYKRA+GALLV+DVTS+ SF+NA  VWLRELKN+A+S S LL+ L LVGNK+
Sbjct:    6 SLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKV 144
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BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A024U937_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U937_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.600e-59
Identity = 95/139 (68.35%), Postives = 117/139 (84.17%), Query Frame = 0 
Query:    5 YDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDG---AAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKI 140
            YDELYK+VLVGD  VGKTNLLAY+T+ D+ +  D    A++ FS+ +K T+GVEF T I+THP+GKRIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV+S+ SFDNA+  WL+EL+NSA++ S LL CL LVGNKI
Sbjct:    8 YDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADTNSTLLSCLMLVGNKI 146
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BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A024UAY6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAY6_9STRA)

HSP 1 Score: 195 bits (495), Expect = 4.510e-59
Identity = 95/139 (68.35%), Postives = 117/139 (84.17%), Query Frame = 0 
Query:    5 YDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDG---AAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKI 140
            YDELYK+VLVGD  VGKTNLLAY+T+ D+ +  D    A++ FS+ +K T+GVEF T I+THP+GKRIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV+S+ SFDNA+  WL+EL+NSA++ S LL CL LVGNKI
Sbjct:    8 YDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADTNSTLLSCLMLVGNKI 146
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BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A485LBE8_9STRA (Aste57867_18857 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBE8_9STRA)

HSP 1 Score: 195 bits (496), Expect = 8.460e-59
Identity = 95/139 (68.35%), Postives = 117/139 (84.17%), Query Frame = 0 
Query:    5 YDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRD---GAAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKI 140
            YDELYK+VLVGD  VGKTNLLAY+T+ D  +  D    A++ FS+ +K T+GVEF T I+THP+GKRIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV+S+ SFDNA++ WL+EL+NSA++ S LL CL LVGNKI
Sbjct:   36 YDELYKVVLVGDPGVGKTNLLAYFTASDDEMAIDTSTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQSHWLKELRNSADTNSTLLSCLMLVGNKI 174
[Close]
BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A1W0A2A3_9STRA (Rab11/RabA-family small GTPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2A3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 9.330e-59
Identity = 95/139 (68.35%), Postives = 117/139 (84.17%), Query Frame = 0 
Query:    5 YDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDG---AAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKI 140
            YDELYK+VLVGD  VGKTNLLAY+T+ ++ +  D    A++ FS+ +K T+GVEF T I+THP+GKRIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DVTSK +F+NA+  WL+EL+NSA+S S LL CL LVGNKI
Sbjct:    4 YDELYKVVLVGDPGVGKTNLLAYFTATEEEMAMDAETNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVTSKATFENAQCHWLKELRNSADSNSTLLSCLMLVGNKI 142
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BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A6G0WZ29_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZ29_9STRA)

HSP 1 Score: 193 bits (490), Expect = 2.820e-58
Identity = 96/163 (58.90%), Postives = 125/163 (76.69%), Query Frame = 0 
Query:    5 YDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDG---AAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKIGEQRTVSPLLVNSCPQAVGLQTSG 164
            YDELYK+VLVGD  VGKTNLLAY+T+ +  +  D    A++ FS+ +K T+GVEF T I+THP+GKRIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV+S+ +FDNA++ WL+EL+NSA++ S LL CL LVGNKI   +  S  +V+       +  +G
Sbjct:    9 YDELYKVVLVGDPGVGKTNLLAYFTATEDEMAIDSSTNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRSTFDNAQSHWLKELRNSADTNSTLLSCLMLVGNKIDLAKDPSVSVVSQEDHDAAISEAG 171
[Close]
BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A067CD03_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD03_SAPPC)

HSP 1 Score: 189 bits (480), Expect = 8.320e-57
Identity = 94/140 (67.14%), Postives = 118/140 (84.29%), Query Frame = 0 
Query:    5 YDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDG---AAQSFSST-QKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKI 140
            YDELYK+VLVGD  VGKTNLLAY+T+ ++ +  D    A++ FSS+ +K T+GVEF T I+THP+GKRIKAQIWDTAGQERYRAITSSHY+RAAGAL+V+DV+S+ +FDNA+  WL+EL+NSA++ S LL CL LVGNKI
Sbjct:    4 YDELYKVVLVGDPGVGKTNLLAYFTATEEEMAVDASTNASKIFSSSVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVSSRATFDNAQTHWLKELRNSADNNSTLLSCLMLVGNKI 143
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BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A6S9ECQ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ECQ7_HETAK)

HSP 1 Score: 189 bits (479), Expect = 1.040e-56
Identity = 102/167 (61.08%), Postives = 122/167 (73.05%), Query Frame = 0 
Query:    5 YDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDGAAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKIG--EQRTVSPLLVNSCPQAVGL---QTSGAR 166
            YD +YKIVLVGD  VGKTNLL+ +TS  K    +GA  SF+  +K TVGVEFA+ IV HP+G RIKAQIWDTAGQERY AIT SHY+RAAGALLV+DVT++KSFDNA+N WL+ELK SA+SES LLE   L GNKI   ++R V      S    +GL   Q++ AR
Sbjct:   13 YDVMYKIVLVGDPGVGKTNLLSCFTSYRKDTSENGAVVSFNENRKPTVGVEFASWIVKHPNGDRIKAQIWDTAGQERYNAITKSHYRRAAGALLVYDVTNRKSFDNAKNWWLKELKESADSESSLLENTLLCGNKIDLVDKRVVHDAEQASAAAGLGLSMHQSTSAR 179
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BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A6A3EW12_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EW12_9STRA)

HSP 1 Score: 188 bits (477), Expect = 8.090e-56
Identity = 94/142 (66.20%), Postives = 115/142 (80.99%), Query Frame = 0 
Query:    1 MTLD--YDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDGAAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKI 140
            MT+D  YDELYK+VLVGD  VGKTNLLA + + D  V  +G ++SFS+ +K T+GVEFAT IV HP+GKR+KAQIWDTAGQERYRAITSSHY+RAAGAL+VFDVTS+++FDNA   WL+ELK +A   S L  C+ LVGNK+
Sbjct:   34 MTMDQHYDELYKVVLVGDPGVGKTNLLATFLASDS-VNENGVSRSFSAVRKPTIGVEFATAIVRHPNGKRLKAQIWDTAGQERYRAITSSHYRRAAGALIVFDVTSRETFDNAHEHWLKELKAAAGLSSTLTSCIMLVGNKV 174
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BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Match: A0A0P1AJW8_PLAHL (Rab other n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJW8_PLAHL)

HSP 1 Score: 184 bits (468), Expect = 4.780e-55
Identity = 100/190 (52.63%), Postives = 131/190 (68.95%), Query Frame = 0 
Query:    1 MTLDYDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDGAAQSFSSTQKATVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVFDVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKIGEQRT-----VSPLLVNSCPQAVGL--QTSGARYSEGLWCRCFLAVLLLV 183
            M   YDELYK+VLVGD  VGKTNLLA + + +  V   G ++SFS+ + AT+GVEFAT I+ HP+GKRIKAQIWDTAGQERYRAITSSHY+RAAGAL+VFDVT ++SF+NA+  WL+ELK +A   S L  C+  VGNK+  + T     V   L  S  + +GL  Q + A+    + CR F  +++ +
Sbjct:    1 MEQHYDELYKVVLVGDPGVGKTNLLATFLAAET-VNEQGISRSFSADRNATIGVEFATTIIRHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVFDVTKRESFNNAQEYWLKELKAAANPSSTLASCIMFVGNKVDLESTSNVNYVDQELHESTARMLGLMHQRASAKTCHNV-CRAFKDLVIAI 188
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6B4_ECTSI1.990e-6877.70Rab11B, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A024U937_9STRA1.600e-5968.35Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A024UAY6_9STRA4.510e-5968.35Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A485LBE8_9STRA8.460e-5968.35Aste57867_18857 protein n=1 Tax=Aphanomyces stella... [more]
A0A1W0A2A3_9STRA9.330e-5968.35Rab11/RabA-family small GTPase n=1 Tax=Thraustothe... [more]
A0A6G0WZ29_9STRA2.820e-5858.90Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A067CD03_SAPPC8.320e-5767.14Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6S9ECQ7_HETAK1.040e-5661.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6A3EW12_9STRA8.090e-5666.20Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A0P1AJW8_PLAHL4.780e-5552.63Rab other n=1 Tax=Plasmopara halstedii TaxID=4781 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 9..30
score: 45.0
coord: 43..59
score: 29.23
coord: 62..84
score: 52.86
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 11..186
e-value: 3.5E-6
score: -38.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..186
e-value: 5.1E-33
score: 125.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..185
e-value: 0.003
score: -58.3
NoneNo IPR availableGENE3D3.40.50.300coord: 2..167
e-value: 2.6E-36
score: 126.6
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 6..141
NoneNo IPR availablePANTHERPTHR24073:SF549coord: 6..141
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 189..234
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..170
NoneNo IPR availablePROSITEPS51419RABcoord: 4..234
score: 21.231
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 8..141
e-value: 1.9E-20
score: 71.2
IPR001806Small GTPasePFAMPF00071Rascoord: 10..146
e-value: 4.4E-31
score: 107.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:4113730..4116495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19802.1mRNA_S-ischiensis_contig8.19802.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 4113704..4116495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19802.1 ID=prot_S-ischiensis_contig8.19802.1|Name=mRNA_S-ischiensis_contig8.19802.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=234bp
MTLDYDELYKIVLVGDAAVGKTNLLAYYTSQDKRVKRDGAAQSFSSTQKA
TVGVEFATMIVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRAAGALLVF
DVTSKKSFDNARNVWLRELKNSAESESHLLECLTLVGNKIGEQRTVSPLL
VNSCPQAVGLQTSGARYSEGLWCRCFLAVLLLVVWVSPCTNLECTTYGGR
EFSAAEWISFFFVPPPPSLRLPTWSMVSGIRQAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase