prot_S-ischiensis_contig8.19785.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19785.1
Unique Nameprot_S-ischiensis_contig8.19785.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length436
Homology
BLAST of mRNA_S-ischiensis_contig8.19785.1 vs. uniprot
Match: D7G6D4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6D4_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 6.940e-47
Identity = 141/372 (37.90%), Postives = 184/372 (49.46%), Query Frame = 0
Query:   76 WAQALRDHKRALE--VLDRWWRQHHPAMAQLSRRLLKALLPWLRPLTPGGARRAAYHLESRNLVLALDRLDERLPGSTSSWSKRWLKRPRPCCDAEWWRASELAGDNRVTIAVAAAGAAA---------AWCSWRCSPPCWALLAAELLCGAAFITCRLTHESARKDAEVLLARLHMLEQSIDPYFRGVAACVRMVRCSQALSMGLRLSVPMPPVARLEGQMAAP----------LTARELRALLADVLVAACNQAAYARYVVHSSWWPQAVQLP--AGVVRGPLQAGWELRDVPSASGGGSGGWGSEQLLLSGLASVEQELVGTLREFVAETAACVARELDSWDLVGFSCHSGLFAASEAAGQLAGFLAAA 424
            W+    D  R L   VL RWW +  P + +        L+ +L P TP  ARRA Y    R L+ +LDR+D  LPG    WS RW  R   C D    R++   G + V  AV  AG AA         +WCSWR S P W LL  E+  G+A +   L  +    +A+VL A L  LE+S+ P+FRGV AC+RMV+CSQ LS GLRLS+PMPPVAR+EG++ A              R+LR+++ DVL     QA               +QL    G   G L++G +  D        SGG  S Q L S LA  E+ LV  LR F+A  AA V   +   ++ G    S L   SEA  +LA +  AA
Sbjct:   89 WSTVFADTSRPLPNTVLGRWWHEQQPIVTRFVHDYGAVLVRFLTPFTPRAARRAGYCCGCRALLRSLDRIDLELPGGEGGWSSRWRSRRCECGDR---RSALTEGISSVCAAVGGAGVAAVIIMVAAAVSWCSWRRSSPSWLLLLGEVAIGSAGVAHYLARDDGHAEAKVLEAHLVALERSLGPFFRGVHACMRMVKCSQTLSFGLRLSIPMPPVARMEGRLPATGSGGLPGRAEAALRDLRSVVMDVLEGGVEQA-------------NVLQLKERCGDTDGFLESGGQASD--------SGGRQSMQSL-SDLAGTERRLVVDLRRFLAIVAARVEGVMVEPEMWGLWWDSQLVDVSEALAELARYFEAA 435          
BLAST of mRNA_S-ischiensis_contig8.19785.1 vs. uniprot
Match: A0A836CBI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI9_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.190e-5
Identity = 53/167 (31.74%), Postives = 70/167 (41.92%), Query Frame = 0
Query:  226 ESARKDAEVLLARLHMLEQSIDPYFRGVAACVRMVRCSQALSMGLRLSVPMPPVARLEGQMAAPLTARELRALLADVLVAACNQAAYARYVVH-SSWWPQAVQLPAGVVR-GPLQAGWELRDVPSASGGGSGGWGSEQLLLSGLASVEQELVGTLREFVAETAACVA 390
            E AR D + L+A L             VAA  RM++C+QA +MGLRL++PMPPVAR+E        AR  RA L    + AC   A      H +      +       R GP         +P     G        LLL+ +A  E  L   L +FV   A  +A
Sbjct:  121 ERARADVKQLVAALXXXXXXXXXXXXXVAAAARMMKCAQAAAMGLRLALPMPPVARMEA------AARNRRAALQLPSLRACAAEALQLLRAHVARCTSDVIAATTSAARAGPAXXXXXXXXLPPQQSPGG------VLLLAEIADAEAALTEELHQFVLAVARALA 275          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6D4_ECTSI6.940e-4737.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBI9_9STRA2.190e-531.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3972033..3976851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19785.1mRNA_S-ischiensis_contig8.19785.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3972033..3976852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19785.1 ID=prot_S-ischiensis_contig8.19785.1|Name=mRNA_S-ischiensis_contig8.19785.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=436bp
RPRPAPWRGDEAGMARDGSSSPDGHTSGDENEEETQNLAPVSPGVGKEGR
NVGSPSREDWIESVRQKAWAKALKLWAQALRDHKRALEVLDRWWRQHHPA
MAQLSRRLLKALLPWLRPLTPGGARRAAYHLESRNLVLALDRLDERLPGS
TSSWSKRWLKRPRPCCDAEWWRASELAGDNRVTIAVAAAGAAAAWCSWRC
SPPCWALLAAELLCGAAFITCRLTHESARKDAEVLLARLHMLEQSIDPYF
RGVAACVRMVRCSQALSMGLRLSVPMPPVARLEGQMAAPLTARELRALLA
DVLVAACNQAAYARYVVHSSWWPQAVQLPAGVVRGPLQAGWELRDVPSAS
GGGSGGWGSEQLLLSGLASVEQELVGTLREFVAETAACVARELDSWDLVG
FSCHSGLFAASEAAGQLAGFLAAAAEGLAGAMGPGA
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