prot_S-ischiensis_contig8.19781.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19781.1
Unique Nameprot_S-ischiensis_contig8.19781.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length170
Homology
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BLAST of mRNA_S-ischiensis_contig8.19781.1 vs. uniprot
Match: A0A6H5L5W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W5_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 4.890e-22
Identity = 58/144 (40.28%), Postives = 77/144 (53.47%), Query Frame = 0 
Query:    3 ATRETLLADGGVDLIILVINRFLEDPGV-CEFGCWALAAFAGDCDEDGKDEPF--QSHLATRGGLQAAVNILTAHPDSQLLRHEGLLVGLATVQGNPETTEQARLLGFHRH-AQEGVRRWLDDTRLVNLACWLLHELFGPYTHL 142
            A+RE LL   G++L I ++N+F E+  V CE+GCWALA FAG+ D D     F  Q  +   GGL A    + AH DS  LR  G+    A V  N  T  Q   L  H   A++ +RRW +D  L  LACW+L  +  P + L
Sbjct:  158 ASRERLLECRGIELFIQIVNKFCEEDRVLCEYGCWALAVFAGEGDSDSDPSVFRFQEAVVEAGGLAAVGYAVDAHRDSAQLRRYGVSALAAIVHENASTAGQLHSLNLHATVAEDSIRRWPNDPELSCLACWVLRSVVEPPSRL 301
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BLAST of mRNA_S-ischiensis_contig8.19781.1 vs. uniprot
Match: D7G2D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D6_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.640e-20
Identity = 56/146 (38.36%), Postives = 77/146 (52.74%), Query Frame = 0 
Query:    3 ATRETLLADGGVDLIILVINRFLE-DPGVCEFGCWALAAFAGDCDEDGKDEP----FQSHLATRGGLQAAVNILTAHPDSQLLRHEGLLVGLATVQGNPETTEQARLLGFHRH-AQEGVRRWLDDTRLVNLACWLLHELFGPYTHL 142
            A+RE LL   G++L +L++++F E D  +CE+GCWALA FAG+        P    FQ  +   GGL A    + AHPDS  LR  G+    A V  N  T  Q   L      A++ +RRW +D  L  LACW+L  +  P + L
Sbjct:  140 ASREGLLECRGIELFVLIVSKFCEEDRLLCEYGCWALAVFAGEGXXXXXXXPSVFRFQEAVVEAGGLAAVGCAVDAHPDSAQLRRCGVSALAAIVHDNASTAGQLHSLNLQATVAEDSIRRWPNDPELSCLACWVLRSVVEPPSRL 285
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5W5_9PHAE4.890e-2240.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2D6_ECTSI3.640e-2038.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..156
e-value: 3.9E-5
score: 25.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3927477..3929186 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19781.1mRNA_S-ischiensis_contig8.19781.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3927477..3929186 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19781.1 ID=prot_S-ischiensis_contig8.19781.1|Name=mRNA_S-ischiensis_contig8.19781.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=170bp
CSATRETLLADGGVDLIILVINRFLEDPGVCEFGCWALAAFAGDCDEDGK
DEPFQSHLATRGGLQAAVNILTAHPDSQLLRHEGLLVGLATVQGNPETTE
QARLLGFHRHAQEGVRRWLDDTRLVNLACWLLHELFGPYTHLLQMSLGDS
HAAAAAGGPAQARDIATADY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold