prot_S-ischiensis_contig8.19759.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19759.1
Unique Nameprot_S-ischiensis_contig8.19759.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length410
Homology
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BLAST of mRNA_S-ischiensis_contig8.19759.1 vs. uniprot
Match: D7FUP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP0_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 5.200e-33
Identity = 90/209 (43.06%), Postives = 119/209 (56.94%), Query Frame = 0 
Query:    1 PAPRVPGPGTYDVEGTLESEGAGTHFARRGARPEPASAGAPRLVFDGEKEHGRGGRPGPGSYHVDLDVTTPTWQVYPPSRD-VVASLPPSLPAQGAGPGAYVTSQFAASGPAFSLGGKLPEKVPEAADGPGPGEYIQVRSPVYDGVPVPAEGASRQGFGHQTSPRFEAAAGATPGPGAYLSHRFQAR-GPGISIGERARSPGWSAKLKD 207
            P PRVPGPGTY+V G+L+   AGT F+  GA+P        RLVF  E+E GR  +PGPG+Y V  +     W V P  R       P S PA  AGPGAY++S+FA  GPA+S+  + P  + +  + PGPG+Y+ V+  V  G     E  + +GFG + SPRF   A  TPGPG Y S  F  + G  I+ G   R  GWSA++K+
Sbjct:   19 PGPRVPGPGTYNVAGSLDGGSAGTFFSPIGAKPTCPRTDVKRLVFGIERE-GRD-KPGPGAYDVTKNRPL-RWNVSPRDRKHQTPRFPVSSPATDAGPGAYISSEFAGKGPAYSMPSRSPTTL-DTPESPGPGQYVHVQLSVGRG-----ENGAGEGFGKRDSPRFATEATPTPGPGEYQSPAFNPQLGKNITFGRNLRPAGWSARIKE 218
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19759.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUP0_ECTSI5.200e-3343.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010736Sperm-tail PG-rich repeatPFAMPF07004SHIPPO-rptcoord: 6..15
e-value: 0.27
score: 12.2
NoneNo IPR availablePANTHERPTHR21580SHIPPO-1-RELATEDcoord: 5..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3717824..3723246 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19759.1mRNA_S-ischiensis_contig8.19759.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3716572..3723246 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19759.1 ID=prot_S-ischiensis_contig8.19759.1|Name=mRNA_S-ischiensis_contig8.19759.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=410bp
PAPRVPGPGTYDVEGTLESEGAGTHFARRGARPEPASAGAPRLVFDGEKE
HGRGGRPGPGSYHVDLDVTTPTWQVYPPSRDVVASLPPSLPAQGAGPGAY
VTSQFAASGPAFSLGGKLPEKVPEAADGPGPGEYIQVRSPVYDGVPVPAE
GASRQGFGHQTSPRFEAAAGATPGPGAYLSHRFQARGPGISIGERARSPG
WSAKLKDTMMTLLPWERADHDPDRDADPQPSRSPCGRQLPGRGRCRPARG
HHRHRHLHRHLHRRRPASAPPASRRRRPPPPAAAAGSCHSRRCPGRLSIG
AVTRQSRRGGSSSSSCCCAAGAASRTLSARARGRGGGRQRGQRRWRRRRL
RRRRRRGRTRPRLSAPPRGCRRPGSPSPGPGSTRLPPTTSCGPGAACSAS
AARARGNWS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt