prot_S-ischiensis_contig8.19694.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19694.1
Unique Nameprot_S-ischiensis_contig8.19694.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length91
Homology
BLAST of mRNA_S-ischiensis_contig8.19694.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 7.600e-28
Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 0
Query:   14 QRPQLTLLLRVLRDGVRRPLERVPCVVALALARAAEVVACDPGSEVYRTVNSFLLHRPFVHLHDVPLFTPLFTGVTGG 91
            QRPQLTLLLR LRDGV  PL+RVPC VA+ LA+A+E +A  PGSE+YR VNSFLLHRPFV L ++PLF  LFTGV  G
Sbjct: 1990 QRPQLTLLLRCLRDGVETPLQRVPCAVAVVLAKASEALAASPGSEIYRVVNSFLLHRPFVRLDELPLFDVLFTGVQQG 2067          
BLAST of mRNA_S-ischiensis_contig8.19694.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 1.040e-27
Identity = 55/78 (70.51%), Postives = 63/78 (80.77%), Query Frame = 0
Query:   14 QRPQLTLLLRVLRDGVRRPLERVPCVVALALARAAEVVACDPGSEVYRTVNSFLLHRPFVHLHDVPLFTPLFTGVTGG 91
            QRPQLTLLLR LRDGV  PL+RVPC VA+ LA+A+E +A  PGSE+YR VNSFLLHRPFV L ++PLF  LFTGV  G
Sbjct: 2620 QRPQLTLLLRCLRDGVETPLQRVPCAVAVVLAKASEALASSPGSEIYRVVNSFLLHRPFVRLDELPLFDVLFTGVQQG 2697          
BLAST of mRNA_S-ischiensis_contig8.19694.1 vs. uniprot
Match: A0A835ZKE6_9STRA (NopRA1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKE6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.470e-14
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   17 QLTLLLRVLRDGVRRPLERVPCVVALALARAAEVVACDPGSEVYRTVNSFLLHRPFVHLHDVPLFTPLFTG 87
            QL LLLR LRDGV  P  RVP +VA++LA AA+V+A  P  + Y  +N FLL RP + +++VP FT L +G
Sbjct:  389 QLLLLLRSLRDGVTDPSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEVPFFTTLVSG 459          
BLAST of mRNA_S-ischiensis_contig8.19694.1 vs. uniprot
Match: L8HLC0_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HLC0_ACACA)

HSP 1 Score: 56.6 bits (135), Expect = 2.740e-7
Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   14 QRPQLTLLLRVLRDGVRRPLERVPCVVALALARAAEVVACDPGSEVYRTVNSFLLHRPFVHLHDVPLFTPL 84
            +RPQ+T LLR +R+ +    +R+P  +A   A AA VV   P   +Y+ VN+FLLHRP + L D+P+   L
Sbjct: 1586 ERPQITQLLRAVRNAMVEAFQRLPAYIASFTAHAALVVL-TPEHGLYKPVNAFLLHRPALVLGDIPMLYEL 1655          
BLAST of mRNA_S-ischiensis_contig8.19694.1 vs. uniprot
Match: A0A7J7NM77_9MAGN (Uncharacterized protein n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NM77_9MAGN)

HSP 1 Score: 52.8 bits (125), Expect = 6.250e-6
Identity = 26/73 (35.62%), Postives = 45/73 (61.64%), Query Frame = 0
Query:   17 QLTLLLRVLRDGVRRPLERVPCVVALALARAAEVVACDPGSEVYRTVNSFLLHRPFVHLHDVPLFTPLFTGVT 89
            +L LLL  L++G+ +P +R+P V+A+  A A+ V+  DP  + Y T++  L+    V+L  VPLF  +F  ++
Sbjct: 2022 RLRLLLTYLQNGIEKPWQRIPSVIAIFAAEASFVLL-DPSHDHYLTISKLLMRSSRVNLKSVPLFYTMFDSIS 2093          
BLAST of mRNA_S-ischiensis_contig8.19694.1 vs. uniprot
Match: A0A0N4U150_DRAME (NopRA1 domain-containing protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A0N4U150_DRAME)

HSP 1 Score: 50.1 bits (118), Expect = 5.180e-5
Identity = 26/72 (36.11%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   14 QRPQLTLLLRVLRDGVRRPLERVPCVVALALARAAEVVACDPGSEVYRTVNSFLLHRPFVHLHDVPLFTPLF 85
            ++P    LLR+ R+ + RP ER+P VV+   AR ++++  +P   VY ++ +FL  +P V + +VP F  LF
Sbjct:  254 EKPLFAYLLRIFRNSIPRPNERLPHVVSHFFARTSKLLL-NPSDSVYASILAFLTLKPTVDIGNVPEFYKLF 324          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G8A9_ECTSI7.600e-2870.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K182_9PHAE1.040e-2770.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZKE6_9STRA8.470e-1452.11NopRA1 domain-containing protein n=1 Tax=Tribonema... [more]
L8HLC0_ACACA2.740e-742.25Uncharacterized protein n=1 Tax=Acanthamoeba caste... [more]
A0A7J7NM77_9MAGN6.250e-635.62Uncharacterized protein n=1 Tax=Kingdonia uniflora... [more]
A0A0N4U150_DRAME5.180e-536.11NopRA1 domain-containing protein n=1 Tax=Dracuncul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032436Nucleolar pre-ribosomal-associated protein 1, C-terminal domainPFAMPF16201NopRA1coord: 12..86
e-value: 3.6E-14
score: 52.8
IPR039844Nucleolar pre-ribosomal-associated protein 1PANTHERPTHR13500NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1coord: 12..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3218287..3220609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19694.1mRNA_S-ischiensis_contig8.19694.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3218287..3220609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19694.1 ID=prot_S-ischiensis_contig8.19694.1|Name=mRNA_S-ischiensis_contig8.19694.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=91bp
SSSGVRGRGDSNSQRPQLTLLLRVLRDGVRRPLERVPCVVALALARAAEV
VACDPGSEVYRTVNSFLLHRPFVHLHDVPLFTPLFTGVTGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032436NopRA1_C
IPR039844URB1