prot_S-ischiensis_contig8.19687.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19687.1
Unique Nameprot_S-ischiensis_contig8.19687.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length107
Homology
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BLAST of mRNA_S-ischiensis_contig8.19687.1 vs. uniprot
Match: D7G8A9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A9_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 5.590e-8
Identity = 41/97 (42.27%), Postives = 53/97 (54.64%), Query Frame = 0 
Query:    1 VRQRLPEVQTLLGLRDRLGSDAELSPTVAVAAAAEVAATTPDDYTAAASAATGRGALLPPSRALFMRCRLLSLLRRYAEVLPEAVAGANFDLLKLLP 97
            +RQR+P++QTLLGLRD++G  A                         AS A G   +    RA+ +R R+LSLL RYA V+P +VA A FD LKLLP
Sbjct:  660 LRQRMPDLQTLLGLRDKIGVGA-----------------------GDASKAPGGQHV---DRAVVLRWRVLSLLDRYARVIPSSVAAARFDFLKLLP 730
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BLAST of mRNA_S-ischiensis_contig8.19687.1 vs. uniprot
Match: A0A6H5K182_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K182_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 2.670e-7
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 0 
Query:    1 VRQRLPEVQTLLGLRDRLGSDAELSPTVAVAAAAEVAATTPDDYTAAASAATGRGALLPPSRALFMRCRLLSLLRRYAEVLPEAVAGANFDLLKLLP 97
            +RQR+P++QTLLGLRD++G  A                          S  TG   +    RA+ +R R+LSLL RYA ++P +VA A FD LKLLP
Sbjct:  643 LRQRMPDLQTLLGLRDKIGVGA-----------------------GDGSKVTGGQHV---DRAVVLRWRVLSLLDRYARLIPSSVAAARFDFLKLLP 713
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19687.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8A9_ECTSI5.590e-842.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K182_9PHAE2.670e-740.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3205543..3205863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19687.1mRNA_S-ischiensis_contig8.19687.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3205543..3205863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19687.1 ID=prot_S-ischiensis_contig8.19687.1|Name=mRNA_S-ischiensis_contig8.19687.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=107bp
VRQRLPEVQTLLGLRDRLGSDAELSPTVAVAAAAEVAATTPDDYTAAASA
ATGRGALLPPSRALFMRCRLLSLLRRYAEVLPEAVAGANFDLLKLLPAGG
GGGGGSG
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