prot_S-ischiensis_contig8.19685.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19685.1
Unique Nameprot_S-ischiensis_contig8.19685.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length181
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021714Nucleolar pre-ribosomal-associated protein 1, N-terminalPFAMPF11707Npa1coord: 33..171
e-value: 4.8E-16
score: 59.0
IPR039844Nucleolar pre-ribosomal-associated protein 1PANTHERPTHR13500NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1coord: 34..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3202905..3204342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19685.1mRNA_S-ischiensis_contig8.19685.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3202905..3204342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19685.1 ID=prot_S-ischiensis_contig8.19685.1|Name=mRNA_S-ischiensis_contig8.19685.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=181bp
MLKHSDRAPGRASGGGGGGGGAALSVAVLLGPGLWRDPPETVEVVLRGLH
RRVLLNRRVARPTKEAFFSGAVIEQLRKVYDTAPTPLRLQLHSLMRSLLC
DPDTSPFLSRTGPSPPHTRNGQALLRAAATLGAHNDLDQRGLVLAILRNT
PALFPGYLRSLNPSRLEARPSYSCLQNYTLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021714Npa1_N
IPR039844URB1