prot_S-ischiensis_contig8.19670.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig8.19670.1
Unique Nameprot_S-ischiensis_contig8.19670.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length338
Homology
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: D7FHP2_ECTSI (40S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP2_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 8.310e-138
Identity = 208/251 (82.87%), Postives = 221/251 (88.05%), Query Frame = 0
Query:    4 SQAALPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEEVTAGFQEPQAAPA-GWDAAPAAAAPVVPGAMEGFA 253
            + ++LP  L  +EEDI KML+AQVHIGTRNSD+QM++YIWRRRQDGIHILN+GKTWEKLVLAARIIVAIENPQDV+AISARPYGQRAVLKFAQYTG  SIAGRFTPGTFTNQITKQFREPRLL+ITDP PDAQAVKEASYVNVPVIAFCDSD+P+QNVDVAIP NNKGKLSIGLLYWLLAREVLRMRGTI R   WDVPVDLFFYREPEELEKAEE  A FQEP AA A GW A P A     P  MEGFA
Sbjct:    2 ASSSLPACLHAKEEDIHKMLAAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRTVAWDVPVDLFFYREPEELEKAEEAQAPFQEPAAAAASGWGADPMAGG-AAPTPMEGFA 251          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: A0A7S4DAK2_HETAK (40S ribosomal protein SA n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAK2_HETAK)

HSP 1 Score: 392 bits (1008), Expect = 1.210e-133
Identity = 194/237 (81.86%), Postives = 214/237 (90.30%), Query Frame = 0
Query:    7 ALPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEEVTAGFQEPQAAPAGWDAAPAAAAP 243
            +LP +L  +EEDIQKML+ Q HIGTRNS+N+M +YIW RRQDG+H++NLGKTWEK+VLAARIIVAIENP+DV+AISARPYGQRAVLKFAQYTGA SIAGRFTPGTFTNQITKQFREPRLL+ITDP  D+QAVKEASYVNVPVIAFCDSD+P+ NVDVAIP NNKGKLSIGLLYWLLAREVLRMRGTI+RD PWDVPVDLFFYR+PEELEKA+E  A   E Q  PAGW AAP AAAP
Sbjct:   29 SLPPILQAKEEDIQKMLAGQCHIGTRNSENKMADYIWTRRQDGVHVMNLGKTWEKIVLAARIIVAIENPEDVVAISARPYGQRAVLKFAQYTGANSIAGRFTPGTFTNQITKQFREPRLLVITDPRTDSQAVKEASYVNVPVIAFCDSDSPLPNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTISRDAPWDVPVDLFFYRDPEELEKADEAQAAAYEEQV-PAGWGAAPEAAAP 264          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: A0A836CJ71_9STRA (40S ribosomal protein SA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ71_9STRA)

HSP 1 Score: 390 bits (1003), Expect = 3.720e-133
Identity = 194/233 (83.26%), Postives = 210/233 (90.13%), Query Frame = 0
Query:    4 SQAALPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEEVTAGFQEPQAAPAGWDA 236
            + ++LP VLA +EEDIQKMLSAQ HIGTRNSD+QMK+YIWRRR DGIHILN+GKTWEKLVLAARII AIENPQDVIAISARPYGQRAVLKFAQYTGA SIAGRFTPGTFTNQITKQFREPRLL+ITDP  DAQAVKE+SYVNVPVIAFCDSD+P+  VDVAIP NNKGKLSIGLLYW+LAREVLR+RGT+ RD PWDVPVDLFF+REPEELEK E     F+EP A  AGWDA
Sbjct:    2 ASSSLPAVLAPKEEDIQKMLSAQAHIGTRNSDDQMKDYIWRRRHDGIHILNIGKTWEKLVLAARIIAAIENPQDVIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFREPRLLIITDPRTDAQAVKESSYVNVPVIAFCDSDSPLNYVDVAIPANNKGKLSIGLLYWMLAREVLRLRGTVPRDAPWDVPVDLFFHREPEELEKTE--AEQFEEPAAPTAGWDA 232          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: A0A8J2SYU6_9STRA (40S ribosomal protein SA n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYU6_9STRA)

HSP 1 Score: 384 bits (985), Expect = 8.840e-130
Identity = 200/270 (74.07%), Postives = 226/270 (83.70%), Query Frame = 0
Query:    4 SQAALPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEEVTAGFQEPQAAPAGWDAAPAAAAPVV-----PGAMEGFAPAPGATG--MEPAAP 266
            + A+   +LA +EEDIQKML+AQ HIGTRNSD+ M+EYIWRRRQDG+HI+N+GKTWEKL+LAAR++ AIENPQDVIAISARPYGQRAVLKFAQYTGA SIAGRFTPGTFTNQITKQFREPR+L+ITDP  D+QAV EASYVN+PVIAFCDSD+P+Q+VDVAIP NNKGKLSIGLLYWLLAREVLRMRGT++R  PWDVPVDLFFYR+PEELEKAEE  A   E + A   W+A+   AAP       P AM GF  AP ATG    PAAP
Sbjct:   71 ANASTMSILAPKEEDIQKMLAAQCHIGTRNSDHMMEEYIWRRRQDGVHIINIGKTWEKLMLAARVLTAIENPQDVIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFREPRILVITDPRTDSQAVAEASYVNLPVIAFCDSDSPLQHVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTVSRLAPWDVPVDLFFYRDPEELEKAEEAQAFAAEQEQAQT-WNASAGEAAPKEQPYSDPNAMAGFEQAPAATGGFAAPAAP 339          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: F0Y9V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9V2_AURAN)

HSP 1 Score: 372 bits (954), Expect = 3.410e-127
Identity = 178/212 (83.96%), Postives = 199/212 (93.87%), Query Frame = 0
Query:   11 VLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEEVTA 222
            +LA +EEDIQKMLSAQ HIGTRNSD+ M+EYIWRRRQDGIHI+N+GKTWEKL+LAAR++ AIENPQD+IAISARPYGQRAVLKFAQYTGA SIAGRFTPGTFTNQITKQF+EPR+L+ITDP  D+QAVKEASYVN+PVIAFCDSD+P Q+VDVAIP NNKGKLSIGLLYWLLARE+LRMRGT+AR  PWDVPVDLFFYR+PEELEKA+E  A
Sbjct:    1 ILAPKEEDIQKMLSAQCHIGTRNSDHMMEEYIWRRRQDGIHIINVGKTWEKLMLAARVLTAIENPQDIIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFKEPRILVITDPRTDSQAVKEASYVNLPVIAFCDSDSPCQHVDVAIPSNNKGKLSIGLLYWLLAREMLRMRGTVARHAPWDVPVDLFFYRDPEELEKADEAQA 212          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: A0A7S2G018_9STRA (40S ribosomal protein SA n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G018_9STRA)

HSP 1 Score: 363 bits (931), Expect = 2.860e-122
Identity = 189/249 (75.90%), Postives = 213/249 (85.54%), Query Frame = 0
Query:    6 AALPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEEVTAGFQEPQAAPAGWDAAPAAAAPVVPGAMEGFAP 254
            A+LP VL   E+DIQKML+AQVHIGT+NSD  M EYIWRRRQDGIHI+N+G+TWEKL+LAARIIVAIENP DVIAISARPYGQRAVLKFAQ+TG Q+IAGRFTPGTFTNQ+  QFREPRLLLITDP  D+QAVKEASYVN+PVIAFCDSD+P+Q VDVAIP NNKGKLSIGLLYW LAREVLRMRG+I+R+T W++ VDLFFYR+PEELEK E   A   E  AAP+ W+AAPA  A  VPG  +  AP
Sbjct:    5 ASLPPVLQPSEDDIQKMLAAQVHIGTQNSDFMMAEYIWRRRQDGIHIINIGQTWEKLMLAARIIVAIENPNDVIAISARPYGQRAVLKFAQHTGCQAIAGRFTPGTFTNQVVAQFREPRLLLITDPKVDSQAVKEASYVNLPVIAFCDSDSPLQWVDVAIPANNKGKLSIGLLYWFLAREVLRMRGSISRETQWNICVDLFFYRDPEELEKQEAEKA--YEADAAPS-WNAAPADVAAPVPGVDDFAAP 250          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: A0A1V9ZU98_9STRA (40S ribosomal protein SA n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZU98_9STRA)

HSP 1 Score: 361 bits (927), Expect = 3.570e-122
Identity = 176/224 (78.57%), Postives = 199/224 (88.84%), Query Frame = 0
Query:   11 VLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEEVTAGFQEPQAAPAGW 234
            +L  +EEDIQKML+A VHIGTRN+D QM +YIWRRR DGIHI+N+GKTWEKL+LAA+IIVA+ENP DVIAISARPYGQRAVLKFAQYTG Q+IAGRFTPGTFTNQITKQFREPRLL+ITDP  DAQ V+E++YVNVPVIAFCDSD+P++ VDVAIP NNKGKLSIGLLYWLL+REVLR+RGTI+R  PWDV VDLFFYR+PEELEKAEE   G  +   A AGW
Sbjct:    1 MLTQREEDIQKMLAAMVHIGTRNADAQMGDYIWRRRNDGIHIINVGKTWEKLMLAAKIIVAVENPADVIAISARPYGQRAVLKFAQYTGCQAIAGRFTPGTFTNQITKQFREPRLLIITDPRTDAQPVRESAYVNVPVIAFCDSDSPLRYVDVAIPANNKGKLSIGLLYWLLSREVLRLRGTISRALPWDVAVDLFFYRDPEELEKAEEAQTGAADESMARAGW 224          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: A0A7S2N1P7_9STRA (40S ribosomal protein SA n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1P7_9STRA)

HSP 1 Score: 360 bits (924), Expect = 3.540e-121
Identity = 172/218 (78.90%), Postives = 200/218 (91.74%), Query Frame = 0
Query:    2 LPSQAALPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEE 219
            + S A+LP VL  +EEDIQ MLSA VH GTRNSD+ M+EYIWRRR DGIHILN+GKTWEKL+LAAR+IVAIENP+DVIAISARPYG RAVLKFA YTG+QSIAGRFTPGTFTNQITKQFREPRLL++TDP  D+QAV+E+SYVNVPVIAFCDSD+P+Q+VD+AIP NNKGKLS+GLLYWLLAREVLR+RGT+ R + WDVPVDLFF+R+PE+L+KA+E
Sbjct:   14 MASFASLPPVLQPKEEDIQMMLSANVHQGTRNSDSAMQEYIWRRRNDGIHILNIGKTWEKLMLAARVIVAIENPEDVIAISARPYGMRAVLKFAHYTGSQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQAVRESSYVNVPVIAFCDSDSPLQHVDIAIPANNKGKLSVGLLYWLLAREVLRLRGTVPRSSDWDVPVDLFFHRDPEDLKKADE 231          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: A0A7S1BNQ5_9STRA (40S ribosomal protein SA n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNQ5_9STRA)

HSP 1 Score: 359 bits (922), Expect = 5.790e-121
Identity = 167/214 (78.04%), Postives = 198/214 (92.52%), Query Frame = 0
Query:    6 AALPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEE 219
            ++LP +L  +EEDIQKMLSA +H+GTRNSDNQMKEYIWRRR DGIH+LN+G+TWEKLVLAAR+IVA+ENP+DV+AISARPYG RAVLKFA YTGA+ IAGRFTPGTFTNQITKQFREPRLL++TDP  D+QAV+E+SYVN+PV+AFCDSD+P++ VDVAIP NNK KLS+GLLYWLLAREVLR+RGTI+R   W+VPVDLFF+R+P+ELEKAEE
Sbjct:    5 SSLPQILQPKEEDIQKMLSANIHVGTRNSDNQMKEYIWRRRADGIHVLNIGRTWEKLVLAARVIVAVENPEDVVAISARPYGMRAVLKFAHYTGAKCIAGRFTPGTFTNQITKQFREPRLLIVTDPRTDSQAVRESSYVNIPVVAFCDSDSPLKYVDVAIPANNKAKLSLGLLYWLLAREVLRLRGTISRAADWNVPVDLFFHRDPDELEKAEE 218          
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Match: A0A7S1TPP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPP6_9STRA)

HSP 1 Score: 358 bits (920), Expect = 6.050e-121
Identity = 176/231 (76.19%), Postives = 203/231 (87.88%), Query Frame = 0
Query:    8 LPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGIHILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGAQSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIAFCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWDVPVDLFFYREPEELEKAEEVTAGFQEPQAAPAGWDAAP 238
            LP +L  +EED+QKML+AQVHIGTRNSDNQM +YIW+RR DGIH+LN+GKT+EK+VLAARII +IENPQDVIAISARPYGQRA++KFAQYTG+Q IAGRFTPGTFTNQ TKQF+EPRLL+ITDP  D+QAV+EASY N+PVIAFCDSD+PM+ VDVAIP NNKGK SIGLLYWLLAREVLR+RG+I+R  PW  PVDLFFYR+PEELEKAEE  A   +  AA   W+AAP
Sbjct:    3 LPEILQPKEEDVQKMLTAQVHIGTRNSDNQMSDYIWKRRNDGIHVLNIGKTYEKIVLAARIITSIENPQDVIAISARPYGQRAIIKFAQYTGSQCIAGRFTPGTFTNQRTKQFKEPRLLIITDPRTDSQAVREASYANIPVIAFCDSDSPMRWVDVAIPANNKGKHSIGLLYWLLAREVLRLRGSISRAEPWSTPVDLFFYRDPEELEKAEEAQAQEVDQTAA---WNAAP 230          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig8.19670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP2_ECTSI8.310e-13882.8740S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S4DAK2_HETAK1.210e-13381.8640S ribosomal protein SA n=2 Tax=Heterosigma akash... [more]
A0A836CJ71_9STRA3.720e-13383.2640S ribosomal protein SA n=1 Tax=Tribonema minus T... [more]
A0A8J2SYU6_9STRA8.840e-13074.0740S ribosomal protein SA n=1 Tax=Pelagomonas calce... [more]
F0Y9V2_AURAN3.410e-12783.96Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2G018_9STRA2.860e-12275.9040S ribosomal protein SA n=1 Tax=Florenciella parv... [more]
A0A1V9ZU98_9STRA3.570e-12278.5740S ribosomal protein SA n=3 Tax=Saprolegniaceae T... [more]
A0A7S2N1P7_9STRA3.540e-12178.9040S ribosomal protein SA n=1 Tax=Helicotheca tames... [more]
A0A7S1BNQ5_9STRA5.790e-12178.0440S ribosomal protein SA n=1 Tax=Corethron hystrix... [more]
A0A7S1TPP6_9STRA6.050e-12176.19Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 140..151
score: 49.1
coord: 123..140
score: 42.22
coord: 161..175
score: 50.26
coord: 49..58
score: 59.85
coord: 19..37
score: 32.23
coord: 98..115
score: 46.41
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 22..118
e-value: 1.3E-13
score: 50.7
NoneNo IPR availableGENE3D3.40.50.10490coord: 18..223
e-value: 2.7E-96
score: 322.8
NoneNo IPR availablePANTHERPTHR11489:SF940S RIBOSOMAL PROTEIN SAcoord: 11..244
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 15..210
e-value: 2.7E-89
score: 295.9
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 11..244
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 123..147
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 19..30
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 6..289
score: 51.832
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 15..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig8contigS-ischiensis_contig8:3136025..3144660 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig8.19670.1mRNA_S-ischiensis_contig8.19670.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig8 3136024..3145227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig8.19670.1 ID=prot_S-ischiensis_contig8.19670.1|Name=mRNA_S-ischiensis_contig8.19670.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=338bp
MLPSQAALPGVLATQEEDIQKMLSAQVHIGTRNSDNQMKEYIWRRRQDGI
HILNLGKTWEKLVLAARIIVAIENPQDVIAISARPYGQRAVLKFAQYTGA
QSIAGRFTPGTFTNQITKQFREPRLLLITDPNPDAQAVKEASYVNVPVIA
FCDSDTPMQNVDVAIPGNNKGKLSIGLLYWLLAREVLRMRGTIARDTPWD
VPVDLFFYREPEELEKAEEVTAGFQEPQAAPAGWDAAPAAAAPVVPGAME
GFAPAPGATGMEPAAPPMDSGFGAPAAPVSAMGGGWDAAPAAPVAPAVDV
APAAPVAAGGGWDAPAAPQQSSGGWGDAQPNQSSGGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005707Ribosomal_S2_euk/arc
IPR018130Ribosomal_S2_CS
IPR027498Ribosomal_S2_euk
IPR023591Ribosomal_S2_flav_dom_sf